| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,414,637 | C→T | 6.9% | A535V (GCC→GTC) | PP_3026 → | recombinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,414,637 | 0 | C | T | 6.9% | 235.9 / 4.3 | 83 | A535V (GCC→GTC) | PP_3026 | recombinase |
| Reads supporting (aligned to +/- strand): ref base C (33/44); new base T (3/3); total (36/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGATCGATACTTTCGATCGCATCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGAAATTTTCCTGTACCTCGACGCATACACGCCAGGCGGCCCATGCGAC > NC_002947/3414490‑3414785 | tgatCGATACTTTCGATCGCATCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGcggccg > 2:1160705/1‑150 (MQ=255)tgatCGATACTTTCGATCGCATCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGcggccg > 2:2378891/1‑150 (MQ=255) gatCGATACTTTCGATCGCATCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGcggccgg > 2:484646/1‑150 (MQ=255) tCGATACTTTCGATCGCATCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCTGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCg > 1:2309879/1‑150 (MQ=255) gATACTTTCGATCGCATCGTGATTTACATGCGTGGTTAAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGCTTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTc > 1:194775/1‑150 (MQ=255) aTACTTTCGATCGCATCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCg > 2:1567598/1‑150 (MQ=255) tACTTTCGATCGCATCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGa < 2:1505293/150‑1 (MQ=255) tttCGATCGCATCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCg > 1:2190450/1‑150 (MQ=255) gCATCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGAGAGCGGAGATGGCTCAGGGTAGAAAGGAAGAGCGGAGAGTGGGGGGCCGGCGTCGACCGcccggcct > 2:742068/1‑145 (MQ=255) aTCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGa < 1:1514484/150‑1 (MQ=255) tCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGAt < 1:1567598/150‑1 (MQ=255) tCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGAt < 1:134100/150‑1 (MQ=255) tCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGAt > 2:1691736/1‑150 (MQ=255) tCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGAAACAGGGTAGAAAGGAAGACCGGAGAGTGTGCGGCCGGCGTCGACCGCCCAGACTGAt > 1:24619/1‑150 (MQ=255) gTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGt < 2:2381834/150‑1 (MQ=255) aTTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTa > 2:1065767/1‑150 (MQ=255) tttACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTAc < 1:351461/150‑1 (MQ=255) tttACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTAc < 1:2043791/150‑1 (MQ=255) tttACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGCACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTAc < 2:1650925/150‑1 (MQ=255) tttACATGCGGGGTGTAGTGCCAGCGGGGCGCAGGGCCAGCTACCTCGCTGTGTTGATGATTTCCAAGGCAGGACTGCGGCGGTGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTAc < 2:274178/150‑1 (MQ=255) ttACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACg < 2:2043002/150‑1 (MQ=255) aCATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCt < 1:1071861/150‑1 (MQ=255) aTGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCCGGCACATGGGTGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGa < 2:194775/150‑1 (MQ=255) aTGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGa < 2:2190450/150‑1 (MQ=255) aTGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGa > 1:9504/1‑150 (MQ=255) gCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGAct < 2:2357719/150‑1 (MQ=255) gCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGAct > 1:2357719/1‑150 (MQ=255) gtggtgTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGActtc < 1:1691736/150‑1 (MQ=255) ggtgTAGGGACAGCGGGGCGCAGGGCCAGGTACATCGAGGTGTTGCTGATTTCCAAGGAAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGTCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGActtctt < 2:1036485/150‑1 (MQ=255) tgtAGTGCCAGCGGGGCGCAGCTCCACGGGCATCGATGTCTTGCTGGTTTCCAAGGCAGGACAGCGGGGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGTCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTgt < 2:260838/150‑1 (MQ=255) gtAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTgtc < 2:1861383/150‑1 (MQ=255) tAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTgtcg < 1:827459/150‑1 (MQ=255) aGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTgtcgt < 1:2378891/150‑1 (MQ=255) gTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTgtcgtc > 1:221815/1‑150 (MQ=255) gCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGAACGGCTGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTgg > 1:1956759/1‑150 (MQ=255) cGGAGCGCAGTGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTggg < 1:1307206/150‑1 (MQ=255) ggggCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGa < 1:2284228/150‑1 (MQ=255) gcAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGccc < 2:127846/106‑1 (MQ=255) gcAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGccc > 1:127846/1‑106 (MQ=255) gcAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCg > 2:2225853/1‑150 (MQ=255) gggCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGt < 2:221815/150‑1 (MQ=255) cAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGCCTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGc < 1:1160705/150‑1 (MQ=255) gTACATCGATGTCTTGCTGATTTCCAGAAAATGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAg > 1:442542/1‑150 (MQ=255) tACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAgt < 1:484646/150‑1 (MQ=255) aCATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGTCGACGCCGGCCGCCCa < 2:364377/95‑1 (MQ=255) aCATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGTCGACGCCGGCCGCCCa > 1:364377/1‑95 (MQ=255) aTCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGtgtg < 2:2309879/150‑1 (MQ=255) gCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGt > 1:244208/1‑150 (MQ=255) gtGATTGCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTg < 2:2315544/149‑1 (MQ=255) cTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTg > 1:1175808/1‑150 (MQ=255) tGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGGAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTgg > 1:1999820/1‑150 (MQ=255) gATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTggg < 2:938032/116‑1 (MQ=255) gATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTggg > 1:938032/1‑116 (MQ=255) gATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGc > 2:1786783/1‑150 (MQ=255) aTTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTggg < 2:1360483/127‑1 (MQ=255) aTTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTggg > 1:1360483/1‑127 (MQ=255) aTTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGcc > 1:297228/1‑150 (MQ=255) aTTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTACTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGcc < 1:2069307/150‑1 (MQ=255) ccAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGt < 2:1175808/150‑1 (MQ=255) cAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGtc > 2:1226008/1‑150 (MQ=255) cAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGtc < 1:2225853/150‑1 (MQ=255) aGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGtccc > 2:1077397/1‑150 (MQ=255) ggCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTAc < 1:843268/83‑1 (MQ=255) ggCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTAc > 2:843268/1‑83 (MQ=255) aGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTggg > 1:393213/1‑104 (MQ=255) aGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTggg < 2:393213/104‑1 (MQ=255) ggACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCa < 1:1065767/150‑1 (MQ=255) aCAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGGGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGa < 2:1770103/150‑1 (MQ=255) gcgccgCTGGCTCAGGGTACAAAGGAGGACCGGCGAGCGGGCGGCCGGCGTCGACCGCCCAGACTGAAGGTTACGGGGACTTCTTGTCGTCAATTGGGAGGCCGGGTGGGCTACTCCGCCCCACCAGGTGGCCTTAACCCTCACAGAAAt > 2:762177/1‑150 (MQ=255) cggcgATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGTCGGCGTCGACCGCCCAGACTGATGTTTACGCTGActtc > 2:2170443/1‑82 (MQ=255) cggcgATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGTCGGCGTCGACCGCCCAGACTGATGTTTACGCTGActtc < 1:2170443/82‑1 (MQ=255) cgATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGAAATTTTc < 2:244208/150‑1 (MQ=255) aTGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGAAATTTTCCt < 2:9504/150‑1 (MQ=255) ggTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGAAATTTTCCTGTACCTCGa > 1:810746/1‑150 (MQ=255) gTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGAAATTTTCCTGTACCTCGAc < 2:1896835/150‑1 (MQ=255) aaaGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGGTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGAAATTTTCCTGTACCTCGACGCAt < 1:344989/150‑1 (MQ=255) aGGAAGACCGGAGAGTGGGCGGCCGTCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGAAGGCCGGGTGGGCTAGTGTGCACAACCAGGTGGCCTTGTCCCTCCCAGAAATTTTCCTGTACCTCGACGCATac > 2:864379/1‑150 (MQ=255) aGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTgtc < 1:2390951/66‑1 (MQ=255) aGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTgtc > 2:2390951/1‑66 (MQ=255) ggAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGAAATTTTCCTGTACCTCGACGCATaca > 2:1026169/1‑150 (MQ=255) cGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCt < 1:662663/47‑1 (MQ=255) cGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCt > 2:662663/1‑47 (MQ=255) agtctGGGCGGTCGACGCCGGCCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAgt < 1:74941/78‑1 (MQ=25) agtctGGGCGGTCGACGCCGGCCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAgt > 2:74941/5‑82 (MQ=25) tGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCtt < 1:731748/98‑1 (MQ=255) tGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCtt > 2:731748/1‑98 (MQ=255) gcggcCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGAAATTTTCCTGTACCTCGACGCATACACGCCAGGCGGCCCATGc > 2:355182/1‑150 (MQ=255) ggccggcGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGAAATTTTCCTGTACCTCGACGCATACACGCCAGGCGGCCCATGCGa < 1:1786783/150‑1 (MQ=255) gccggcGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGAAATTTTCCTGTACCTCGACGCATACACGCCAGGCGGCCCATGCGAc < 2:810746/150‑1 (MQ=255) gccggcGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGAAATTTTCCTGTACCTCGACGCATACACGCCAGGCGGCCCATGCGAc < 1:1026169/150‑1 (MQ=255) | TGATCGATACTTTCGATCGCATCGTGATTTACATGCGTGGTGTAGTGCCAGCGGGGCGCAGGGCCAGGTACATCGATGTCTTGCTGATTTCCAAGGCAGGACAGCGGCGATGGCTCAGGGTAGAAAGGAAGACCGGAGAGTGGGCGGCCGGCGTCGACCGCCCAGACTGATGTTTACGCTGACTTCTTGTCGTCTATTGGGAGGCCGGGTGGGCTAGTGTGCACCACCAGGTGGCCTTGTCCCTCCCAGAAATTTTCCTGTACCTCGACGCATACACGCCAGGCGGCCCATGCGAC > NC_002947/3414490‑3414785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |