| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,435,966 | T→C | 6.5% | L279L (TTG→CTG) | gpJ → | baseplate/tail fiber protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,435,966 | 0 | T | C | 6.5% | 370.2 / 10.5 | 123 | L279L (TTG→CTG) | gpJ | baseplate/tail fiber protein |
| Reads supporting (aligned to +/- strand): ref base T (56/59); new base C (3/5); total (59/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.32e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
GGCCCCGCGTGGCCGCCGGCGTACCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGCTGACGTCGAAGGTGGTGACATGAGC > NC_002947/3435817‑3436114 | ggCCCCGCGTGGCCGCCGGCGTACCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGt > 2:1984412/1‑150 (MQ=255) gCCCCGCGTGGCCGCCGGCGTACCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGtt < 1:2054457/150‑1 (MQ=255) ccccGCGTGGCCGCCGGCGTACCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTg > 1:1112845/1‑150 (MQ=255) cccGCGTGGCCGCCGGCGTACCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGc > 2:1434408/1‑150 (MQ=255) ccGCGTGGCCGCCGGCGTACCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGcc < 2:1399357/150‑1 (MQ=255) cgcgTGGCCGCCGGCGTACCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGccc < 1:1766043/150‑1 (MQ=255) gccgccGGCGTACCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCg < 1:1219774/150‑1 (MQ=255) gccgccGGCGTACCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAACTGCCCCTgcag < 1:2018306/150‑4 (MQ=255) ccgGCGTACCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCa < 2:1112845/150‑1 (MQ=255) tACCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATg < 2:524933/150‑1 (MQ=255) aCCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGc < 1:921263/150‑1 (MQ=255) cGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCcg > 1:1356581/1‑150 (MQ=255) aCTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCcgcg < 1:1434408/150‑1 (MQ=255) ggTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAAc < 1:2365256/150‑1 (MQ=255) ccGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTc < 2:2305022/150‑1 (MQ=255) gCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAg < 2:967481/150‑1 (MQ=255) gCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGt < 1:2283429/150‑1 (MQ=255) gCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGt > 2:2283429/1‑150 (MQ=255) gATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGAc > 2:1619928/1‑150 (MQ=255) aTCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGAcc > 1:2091998/1‑150 (MQ=255) ggAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGaa < 1:1563396/150‑1 (MQ=255) ggAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGaa < 2:1356581/150‑1 (MQ=255) gAAGGGCCAGACCCTGACGTGGTGAAGTTCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAg > 1:1271132/1‑150 (MQ=255) gAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAg > 1:731455/1‑137 (MQ=255) gAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAg < 2:731455/137‑1 (MQ=255) gggCCAGACCCTGACGTGGTGCAGGCCACGGCGCGGGCTGGTCTGAATGCGGCCATTGCAGAAACCCGTCACCTGCAGGGACAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCAt > 2:807466/1‑150 (MQ=255) gggCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGt > 1:229820/1‑94 (MQ=255) ccAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAACTGCCCCTgca < 2:2109988/92‑3 (MQ=255) ccAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAACTGCCCCTgca > 1:2109988/1‑90 (MQ=255) ccTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGcc > 2:1265306/1‑150 (MQ=255) tGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAACTGCCCCTgcag < 2:1562134/85‑4 (MQ=255) aCGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCgggg > 2:535483/1‑150 (MQ=255) gtggtgAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGggtg < 1:535483/150‑1 (MQ=255) ggtgAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGggtggt < 1:1067910/150‑1 (MQ=255) gtgAAGGCCACGGCGCGGGCTGGCCTGAATGGGGCCATTGCAGAAGCCCGTCGCCTGCAGAGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGgtggtg > 1:922641/1‑150 (MQ=255) gtgAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATc < 1:1846314/133‑1 (MQ=255) gtgAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTACAGGGGCAACTGCCCCTgcag > 1:1184838/1‑75 (MQ=38) gtgAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTACAGGGGCAACTGCCCCTgcag < 2:1184838/78‑4 (MQ=38) tgAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTacac > 1:2013654/1‑98 (MQ=255) gAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTc < 2:2189700/110‑1 (MQ=255) gAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTc > 1:2189700/1‑110 (MQ=255) aaGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGgtgtgt < 1:2046307/150‑1 (MQ=255) aaGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGgtgtgt > 2:895743/1‑150 (MQ=255) aaGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGgtgtgt < 1:895743/150‑1 (MQ=255) aGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGtgtgtg < 2:2095012/150‑1 (MQ=255) ggCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGa < 2:682314/150‑1 (MQ=255) gCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGAt > 1:1820188/1‑150 (MQ=255) gCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGAt > 1:1259820/1‑150 (MQ=255) cACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACATGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATaa > 1:265172/1‑150 (MQ=255) cACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACggg < 2:1863256/99‑1 (MQ=255) cACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGGCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACggg > 1:1863256/1‑99 (MQ=255) gcgGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTaa > 2:1483343/1‑89 (MQ=255) gggCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCAtt < 2:2256618/150‑1 (MQ=255) gggCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTCGGAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCAtt > 1:1601188/1‑150 (MQ=255) gCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGggtgg < 1:883383/130‑1 (MQ=255) gCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGggtgg > 2:883383/1‑130 (MQ=255) ccTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGggtggt > 2:470031/1‑126 (MQ=255) ccTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGggtggt < 1:470031/126‑1 (MQ=255) tGAATGCGGCCATTGCAGAAGCCCGTAGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACATGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGtt < 2:265172/150‑1 (MQ=255) aTGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCa < 1:1545400/150‑1 (MQ=255) ggCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCAc > 2:2139988/1‑147 (MQ=255) ggCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCAc < 1:2139988/147‑1 (MQ=255) gCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGgtgt < 1:1088165/118‑1 (MQ=255) gCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGgtgt > 2:1088165/1‑118 (MQ=255) cATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGgtgtg > 1:1743995/1‑117 (MQ=255) cATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGgtgtg < 2:1743995/117‑1 (MQ=255) aTTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGggtg > 2:972993/1‑111 (MQ=255) tGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTAc < 1:1148383/150‑1 (MQ=255) cAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGc < 1:1984412/150‑1 (MQ=255) cAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGGAGCGTGACAATGCCACATACAGGAGCTTATGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGc > 1:1741209/1‑150 (MQ=255) aGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGgtgtgt < 2:275415/112‑1 (MQ=255) aGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGgtgtgt > 1:275415/1‑112 (MQ=255) aGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGCt > 2:1779367/1‑150 (MQ=255) gAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGc < 2:1495815/118‑1 (MQ=255) gAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGc > 1:1495815/1‑118 (MQ=255) aaGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGaa < 1:677096/85‑1 (MQ=255) aaGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGaa > 2:677096/1‑85 (MQ=255) aaGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGCTGa < 1:1779367/150‑1 (MQ=255) cccGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGaa > 2:781077/1‑82 (MQ=255) cccGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGaa < 1:781077/82‑1 (MQ=255) tCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCTGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGCTGACGTCGaa < 2:2057338/150‑1 (MQ=255) tCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGTGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGCTGACGTCGaa < 2:1271132/150‑1 (MQ=255) cTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGCTGACGTCGAAggtg < 1:1673114/150‑1 (MQ=255) cTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGCTGACGTCGAAggtg > 1:538745/1‑150 (MQ=255) tGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGCTGACGTCGAAggtgg < 1:527658/150‑1 (MQ=255) tGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGCTGACGTCGAAggtgg > 2:1981803/1‑150 (MQ=255) tGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGGGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACACCAGTTGCACGTCGGTTACACTGACGTCGAAggtgg > 2:78271/1‑150 (MQ=255) cAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGaa > 2:1742676/1‑71 (MQ=255) aGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGaa > 1:55950/1‑70 (MQ=255) aGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGaa < 2:55950/70‑1 (MQ=255) gggCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCggg > 1:126548/1‑84 (MQ=255) gggCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCggg < 2:126548/84‑1 (MQ=255) ggCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGggtg > 2:2349282/1‑86 (MQ=255) ggCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGggtg < 1:2349282/86‑1 (MQ=255) gCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGc > 2:1015385/1‑128 (MQ=255) gCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGc < 1:1015385/128‑1 (MQ=255) aGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGCTGACGTCGAAGGTGGTGACATGAg > 2:1260825/1‑150 (MQ=255) gTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGCTGACGTCGAAGGTGGTGACATGAGc < 2:1994704/150‑1 (MQ=255) ttGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCa > 1:1486695/1‑69 (MQ=255) ttGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCa < 2:1486695/69‑1 (MQ=255) | GGCCCCGCGTGGCCGCCGGCGTACCGACTGAGTTCAAGGTGGAGGCCGAGCTGCAGATCGAGGAAGGGCCAGACCCTGACGTGGTGAAGGCCACGGCGCGGGCTGGCCTGAATGCGGCCATTGCAGAAGCCCGTCGCCTGCAGGGGCAGTTGCCCCTGTCGGCCATCTATGCCGCGTTACACGTAACGGGGATTCGTAGCGTGACCTTGAAGCATCCAGCGGCCGGGGTGGTGTGTGATAAGCGGCATTACCCCAGTTGCACGTCGGTTACGCTGACGTCGAAGGTGGTGACATGAGC > NC_002947/3435817‑3436114 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |