| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,453,506 | C→T | 10.4% | intergenic (‑17/+96) | PP_3069 ← / ← ppiC‑I | outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,453,506 | 0 | C | T | 10.4% | 257.9 / 15.8 | 96 | intergenic (‑17/+96) | PP_3069/ppiC‑I | outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C |
| Reads supporting (aligned to +/- strand): ref base C (40/46); new base T (4/6); total (44/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 | |||||||||||
ACAGGTGTAGGTGTCGTTACCCGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATC > NC_002947/3453358‑3453653 | acaGGTGTAGGTGTCGTTACCCGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTgcg > 2:692351/1‑150 (MQ=255) gtgtaggtgtCGTTACCCGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGTGcacc > 1:1876236/1‑150 (MQ=255) aggtgtCGTTACCCGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCAcgc < 1:232898/150‑1 (MQ=255) gtgtCGTTACCCGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCgt < 1:2152361/150‑1 (MQ=255) tgtCGTTCATCGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCgtg < 2:1343544/150‑1 (MQ=255) tgtCGTTACCCGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACTCAGGGTGAGGATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGtgtg < 2:1956704/150‑1 (MQ=255) tgtCGTTACCCGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCgtg < 1:692351/150‑1 (MQ=255) tCGTTACCCGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCgtggt < 2:1235814/150‑1 (MQ=255) ctcaCCCGGCCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGc > 1:2285387/4‑150 (MQ=255) caCCCGGCCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGcac < 2:2285387/149‑1 (MQ=255) aCCCGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGTGCACCACGCGTGGTGcgca < 2:1876236/150‑1 (MQ=255) aCCCGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGcgca < 2:1422318/150‑1 (MQ=255) cccGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGTGCACCACGCGTGGTGCGCAg < 2:1848462/150‑1 (MQ=255) cgggccgggTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAggg < 1:71777/150‑1 (MQ=255) gagaAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGt < 2:159035/150‑1 (MQ=255) ggaAGGTACAAGCCGCGTGTGCAGCGGGGGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGtt < 2:1386261/149‑1 (MQ=255) agaAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGtt > 2:19248/1‑150 (MQ=255) tgTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAATCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGtat < 2:1179740/149‑1 (MQ=255) gTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGtata > 2:1565015/1‑150 (MQ=255) cAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATagag < 1:19248/150‑1 (MQ=255) gCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCGGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑CCACCTGCGCACCACGCGTGGTGCACAGGGTTACCTGGGTTGTATAgagcag > 2:733995/1‑150 (MQ=255) gcgTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGGTAACCCTGTGCACCACGCGTGGTGcgca > 2:2122707/1‑120 (MQ=39) gcgTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGGTAACCCTGTGCACCACGCGTGGTGcgca < 1:2122707/123‑1 (MQ=39) gcgTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAgg < 2:1855369/124‑1 (MQ=255) gcgTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAgg > 1:1855369/1‑124 (MQ=255) gcgTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGc < 1:2052769/150‑1 (MQ=255) gcgTGTGCAGCAGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCAAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTAGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTgg > 2:2261678/1‑149 (MQ=255) tgCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGCGTTACCGGGGTTGTATAGAGGAGTGCGTCAc < 1:317269/150‑1 (MQ=255) gCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATaga < 2:1802679/137‑1 (MQ=255) gCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATaga > 1:1802679/1‑137 (MQ=255) gCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACg > 1:2392940/1‑150 (MQ=255) cAGCGGGCGAGGCCATGCCCAGCAGCAGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGa < 1:2018910/150‑1 (MQ=255) aGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGAc < 1:1057775/150‑1 (MQ=255) ggCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGcgca < 1:1683859/110‑1 (MQ=255) ggCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGcgca > 2:1683859/1‑107 (MQ=255) gAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACt < 1:821036/150‑1 (MQ=255) ggCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTgg > 1:1256945/1‑150 (MQ=255) cATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCaa > 1:1775560/1‑150 (MQ=255) aTGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCaaa > 2:973588/1‑150 (MQ=255) cagcagCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGt > 2:2056566/1‑150 (MQ=255) gcagcGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACaa > 1:2216653/1‑135 (MQ=255) gcagcGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACaa < 2:2216653/135‑1 (MQ=255) gcagcGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCa < 1:2112323/150‑1 (MQ=255) gcGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGTGCACCACGCGTGGTGCGCAg < 2:18427/92‑1 (MQ=255) gcGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGTGCACCACGCGTGGTGCGCAg > 1:18427/1‑92 (MQ=255) gCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCaaa > 1:866139/1‑150 (MQ=255) gCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTCCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCaaa > 1:1231677/1‑150 (MQ=255) cGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGAc < 2:1474889/120‑1 (MQ=255) cGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGAc > 1:1474889/1‑120 (MQ=255) aCCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATaga < 2:1565583/102‑1 (MQ=255) aCCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATaga > 1:1565583/1‑102 (MQ=255) cccAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AACCCTGTGCACCACGCGTGGTGCGCAGGTTTCCCtggt < 1:1166950/92‑2 (MQ=25) cccAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCt > 1:1925906/1‑150 (MQ=255) cAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAg > 1:1615827/1‑150 (MQ=255) cAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAg > 1:2322706/1‑150 (MQ=255) gTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGcgcg > 2:188273/1‑150 (MQ=255) aTCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGt > 2:1646884/1‑94 (MQ=255) aTCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGt < 1:1646884/94‑1 (MQ=255) aTCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTc > 1:2398838/1‑150 (MQ=255) aGGAGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTcgcg < 2:2273991/150‑1 (MQ=255) ggCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCgg < 2:97395/150‑1 (MQ=255) ggCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCgg < 2:2398838/150‑1 (MQ=255) gTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTg < 2:1215355/105‑1 (MQ=255) gTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTg > 1:1215355/1‑105 (MQ=255) gTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGt > 2:750925/1‑120 (MQ=255) gTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGt < 1:750925/120‑1 (MQ=255) tttcATCAATAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACg < 2:2067744/147‑1 (MQ=255) tCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGc > 1:888136/1‑150 (MQ=255) aGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCAc < 2:985170/150‑1 (MQ=255) aaaaCCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCCAAAGTGTCAGTTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAg < 2:2392940/150‑1 (MQ=255) aaaCCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAgg > 2:1666386/1‑150 (MQ=255) aCCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTCGTCGCGGTAGAACGTTTGCACCAggtg < 2:1956903/150‑1 (MQ=255) aCCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAggtg < 1:1666386/150‑1 (MQ=255) cTCCATTCACCATGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTa < 2:264708/113‑1 (MQ=255) cTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTa > 1:264708/1‑113 (MQ=255) cTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAggtggt > 1:1365823/1‑150 (MQ=255) cTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAggtggt > 2:2018426/1‑150 (MQ=255) cTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGCGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAggtggt > 1:1624650/1‑150 (MQ=255) ccATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGtt > 1:2192270/1‑135 (MQ=255) ccATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGtt < 2:2192270/135‑1 (MQ=255) cATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAgagga > 1:1200495/1‑63 (MQ=255) cATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAgagga < 2:1200495/63‑1 (MQ=255) ccAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCAATAGGCGGTAGcaaaaat > 2:1714714/1‑144 (MQ=255) ggg‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGc < 2:1925906/150‑1 (MQ=255) ggg‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGCCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGc < 2:1447113/150‑1 (MQ=255) g‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGGCGAATTTGctc < 2:888136/150‑1 (MQ=255) g‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGctc < 1:973588/150‑1 (MQ=255) aaaCCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGctct < 1:1565015/150‑1 (MQ=255) ccTGTGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTcg > 2:1720293/1‑107 (MQ=255) ccTGTGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTcg < 1:1720293/107‑1 (MQ=255) cTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTcgc < 2:617748/107‑1 (MQ=255) cTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTcgc > 1:617748/1‑107 (MQ=255) tGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATc > 2:2401219/1‑150 (MQ=255) tGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATc > 1:1816201/1‑150 (MQ=255) tGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATc > 2:1907700/1‑150 (MQ=255) tGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATc < 2:1775560/150‑1 (MQ=255) tGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATc > 1:1018296/1‑150 (MQ=255) | ACAGGTGTAGGTGTCGTTACCCGGGCCGGGTGAGAAGGTACAAGCCGCGTGTGCAGCGGGCGAGGCCATGCCCAGCAGCGGGAGCGAACCCAGGGTCAGCATCAGGCGTAGACGCATCAGGAAAACCTCCATTCACCAGGG‑AAACCTGCGCACCACGCGTGGTGCACAGGGTTACCGGGGTTGTATAGAGGAGTGCGTCACGACCACAACTGGCAAAAATGTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATC > NC_002947/3453358‑3453653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |