| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,453,727 | T→A | 5.6% | I51F (ATT→TTT) | ppiC‑I ← | peptidyl‑prolyl cis‑trans isomerase C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,453,727 | 0 | T | A | 5.6% | 262.6 / 4.2 | 86 | I51F (ATT→TTT) | ppiC‑I | peptidyl‑prolyl cis‑trans isomerase C |
| Reads supporting (aligned to +/- strand): ref base T (47/34); new base A (2/3); total (49/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01 | |||||||||||
GTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGACCAGAATGTGGCGGGCTTGGGCTTTCA > NC_002947/3453578‑3453876 | gTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAAt < 1:25914/150‑1 (MQ=255) gTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGc > 2:2058746/1‑150 (MQ=255) ggCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAAATTCGccc < 1:586080/150‑1 (MQ=255) aaaGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAgg > 1:71236/1‑150 (MQ=255) ggCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTcac < 2:855552/150‑1 (MQ=255) tAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTcaccac > 2:978085/1‑150 (MQ=255) gcgTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCCCACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACcgcg > 1:1769471/1‑150 (MQ=255) gcgTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACcgcg > 2:1885576/1‑150 (MQ=255) gTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCt > 2:1370787/1‑150 (MQ=255) cgcgGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCgg < 2:71236/150‑1 (MQ=255) gcgGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGa > 2:784057/1‑150 (MQ=255) ggTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATg < 2:1256161/150‑1 (MQ=255) ggTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATg > 1:1562312/1‑150 (MQ=255) aCGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCaaa < 1:1907700/150‑1 (MQ=255) aCGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCaaa < 1:2058746/150‑1 (MQ=255) cGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAag < 1:784057/150‑1 (MQ=255) tttGCACCAGGTGGTAGCCGAATTTGCTGTTGATCGGGCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTCCCGGATGGGCAAagag < 2:420002/150‑1 (MQ=255) ttGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAagaga < 1:978085/150‑1 (MQ=255) gCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAAGCTTCTTGAAGATCACCTGGTCGCGCGCGCCGACCATCTGCCCGGGGCGAATATCGCCCAGGTGACAACAGCGTTTGCAGGTCGTGCAAatagata > 2:1120419/1‑148 (MQ=255) cAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACtt < 1:2176611/150‑1 (MQ=255) tggtAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCTAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTc < 1:2261678/150‑1 (MQ=255) gtAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTc > 2:1615274/1‑99 (MQ=255) gtAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTc < 1:1615274/99‑1 (MQ=255) gtAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTcgc < 1:2018426/150‑1 (MQ=255) gCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAg > 2:377114/1‑150 (MQ=255) tttGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTc > 2:144514/1‑150 (MQ=255) ctTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGcc < 1:975981/87‑1 (MQ=255) ctTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGcc > 2:975981/1‑87 (MQ=255) ctTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGc > 2:66744/1‑150 (MQ=255) ttGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCaaa > 2:1875762/1‑118 (MQ=255) ttGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCaaa < 1:1875762/118‑1 (MQ=255) gATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTc < 1:764322/150‑1 (MQ=255) cccGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGtt > 2:652355/1‑150 (MQ=255) tACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTcgc < 1:314729/120‑1 (MQ=255) tACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTcgc > 2:314729/1‑120 (MQ=255) tACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGAt > 2:1007471/1‑150 (MQ=255) cacaCGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATgcg > 1:1529766/1‑150 (MQ=255) cacaCGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATgcg > 2:2040741/1‑150 (MQ=255) cacGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATg > 2:1519589/1‑93 (MQ=255) cacGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATg < 1:1519589/93‑1 (MQ=255) acGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGAt < 2:96062/91‑1 (MQ=255) acGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGAt > 1:96062/1‑91 (MQ=255) aaGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACGATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGACCGCGGGTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGa > 1:1954630/1‑150 (MQ=255) cttcttGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGGTGGCGATGCGCTGCTTGAGCtt > 1:133011/1‑150 (MQ=255) ttcttGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCCACACCGCGCTTGCCGGGTGGGCAAAGAGAGAAATTTTTCGCGAACACGTCGAAAGCCTCGCCGTTGGCGATTCGCTGCTTGAGCttt > 2:818171/1‑150 (MQ=255) ttcttGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCttt > 1:148481/1‑150 (MQ=255) ttcttGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCttt < 1:1370787/150‑1 (MQ=255) cttGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGTTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTc < 2:1769471/150‑1 (MQ=255) ttGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCg > 1:1994385/1‑150 (MQ=255) ttGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCg > 2:1573388/1‑150 (MQ=255) ttGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCACACGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCg > 2:592864/1‑150 (MQ=255) gATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATggg < 1:361825/76‑1 (MQ=255) gATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATggg > 2:361825/1‑76 (MQ=255) gATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGc > 1:1323425/1‑147 (MQ=255) gATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGc < 2:1323425/147‑1 (MQ=255) gATCACCTGGTCGATGGCGCCGACAATCTGCCCGGGCCGAGATTACCCCATGTCTCTACCGCGCTTGCCTGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTc < 2:148481/150‑1 (MQ=255) tCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCCCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGt < 1:1120419/150‑1 (MQ=255) aCCTGGTCGATGGTGCCGACCATCTGCCCGGGGCGAATCTCGCCCAGGTCATCACCGCTCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGCACGCCCCGACGTTGGAGATCCGCTGATTGAGCTTTTCGGCTTCGTCa < 2:1954630/150‑1 (MQ=255) aCCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCa > 1:2145633/1‑150 (MQ=255) ccTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAg > 1:2194995/1‑150 (MQ=255) cTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGc > 2:1457518/1‑150 (MQ=255) gTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGc > 1:2024070/1‑130 (MQ=255) gTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGc < 2:2024070/130‑1 (MQ=255) tCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTc < 1:144514/150‑1 (MQ=255) ggCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAATGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGAc < 2:1562312/150‑1 (MQ=255) ggCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGAc < 2:986635/150‑1 (MQ=255) gcCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGACCAg > 2:2038639/1‑150 (MQ=255) gcccATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGACCAGAAt > 2:1982803/3‑150 (MQ=255) gACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTcgc < 2:458564/75‑1 (MQ=255) gACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTcgc > 1:458564/1‑75 (MQ=255) aCCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTGAGCGGTCTTGACCAGAAtg > 2:1584439/1‑150 (MQ=255) aCCATCTGCCCCGGGGGAATTTCGCCCAGGTCACCACCGCGCTTGGCGGGTGGGGAAAGAGAGAACTTTTTTGCGAGCACGTCGAAAGCCTAGCCCGTGGCGATGGGATGGTTGAGCTTTTCGGGCTCGTTAGGCGGCTTGACCAGAAtg > 2:319892/1‑150 (MQ=255) cATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGATAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGACCAGAAtgtg < 2:1529766/150‑1 (MQ=255) cATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGc < 2:2272486/99‑1 (MQ=255) cATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGc > 1:2272486/1‑99 (MQ=255) tCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAagagag < 2:1447574/59‑1 (MQ=255) tCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAagagag > 1:1447574/1‑59 (MQ=255) tCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGACCAGAATGTGGc > 2:659729/1‑150 (MQ=255) tCTGCCCGGGGCGAATTTCGCCAAGGTCACCACCGCGCTTGCCGGATGGGCACAGAGAGAACTTTTTCGCGAGCACGTCGAAGGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTATTGACCAGAATGTGGc > 1:884882/1‑150 (MQ=255) tGCCAGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGACCAGAATGTGGCgg > 2:1079288/1‑150 (MQ=255) tgggCGAAATTCGCCCCGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCtt < 2:2385499/115‑1 (MQ=255) tgggCGAAATTCGCCCCGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCtt > 1:2385499/2‑116 (MQ=255) tgggCGAAATTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGACCAGAATGTGGCgggcttg > 1:545782/2‑150 (MQ=255) ggggCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAg > 2:1388937/1‑105 (MQ=255) ggggCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAg < 1:1388937/105‑1 (MQ=255) gggCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGACCAGAATGTGGCgggcttgg < 1:319892/150‑1 (MQ=255) gCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGACCAGAATGTGGCgggcttgggc > 2:1256723/1‑150 (MQ=255) tttCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTc < 2:678653/109‑1 (MQ=255) tttCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTc > 1:678653/1‑109 (MQ=255) tttCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGACCAGAATGTGGCGGGCTTGGGCTTTCa > 1:332774/1‑150 (MQ=255) | GTCAGGTGGCAAAGGGCTAGCGCGTTAGTCGCGGTAGAACGTTTGCACCAGGTGGTAGCCGAATTTGCTCTTGATCGGCCCGTGTACCACACGCAAAGGCTTCTTGAAGATCACCTGGTCGATGGCGCCGACCATCTGCCCGGGGCGAATTTCGCCCAGGTCACCACCGCGCTTGCCGGATGGGCAAAGAGAGAACTTTTTCGCGAGCACGTCGAAAGCCTCGCCGTTGGCGATGCGCTGCTTGAGCTTTTCGGCTTCGTCAGCGGTCTTGACCAGAATGTGGCGGGCTTGGGCTTTCA > NC_002947/3453578‑3453876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |