Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,492,832 C→G 5.8% G472R (GGC→CGC)  PP_3097 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,492,8320CG 5.8% 253.3 / 4.5 81G472R (GGC→CGC) PP_3097hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (40/36);  new base G (3/2);  total (43/38)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01

CTTGATGCCGTTGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGCCGATACTGA  >  NC_002947/3492683‑3492981
                                                                                                                                                     |                                                                                                                                                     
cTTGATGCCGTTGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGcc                                                                                                                                                       >  1:7083/1‑150 (MQ=255)
     tGCCGTTGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAgg                                                                                                                                                  <  2:639854/150‑1 (MQ=255)
        cGTTGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGca                                                                                                                                               <  2:948147/150‑1 (MQ=255)
             aTCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGACCAAGGGAACACGc                                                                                                                                          >  1:821577/1‑150 (MQ=255)
                tGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCAcc                                                                                                                                       >  1:49581/1‑150 (MQ=255)
                       gAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCgg                                                                                                                                >  1:455513/1‑150 (MQ=255)
                          tGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTgg                                                                                                                             <  1:1319994/150‑1 (MQ=255)
                          tGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTgg                                                                                                                             <  1:2248480/150‑1 (MQ=255)
                          tGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTgg                                                                                                                             <  1:2344396/150‑1 (MQ=255)
                              ggAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCtt                                                                                                                         <  1:385734/150‑1 (MQ=255)
                               gagaCATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTg                                                                                                                        <  1:597946/150‑1 (MQ=255)
                                    aTTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCgcag                                                                                                                   >  1:1294465/1‑150 (MQ=255)
                                    aTTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCgcag                                                                                                                   <  1:93331/150‑1 (MQ=255)
                                     ttGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCgcagg                                                                                                                  >  1:1997514/1‑150 (MQ=255)
                                     ttGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCCACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCgcagg                                                                                                                  <  1:899081/150‑1 (MQ=255)
                                     tggCGGTAGTTGTACAGCGACAACCGCTACAGCGGCACTTTTCGGCCCTGGCTGACCAGCTACAGATGGTTCAGCGATAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCgcagg                                                                                                                  <  2:998415/148‑1 (MQ=255)
                                      tGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCgcaggc                                                                                                                 <  1:7372/150‑1 (MQ=255)
                                          gTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTgg                                                                                                                             <  2:371598/134‑1 (MQ=255)
                                          gTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTgg                                                                                                                             >  1:371598/1‑134 (MQ=255)
                                             gTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGANCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCACTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGat                                                                                                          >  1:232733/1‑150 (MQ=255)
                                             gTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGat                                                                                                          >  2:2390077/1‑150 (MQ=255)
                                                gTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACTAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGGGGCGGTGGGGTCGCGCAGGCAGCGGATATc                                                                                                       >  2:944790/1‑150 (MQ=255)
                                                     gCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGa                                                                                                  >  1:2039681/1‑150 (MQ=255)
                                                      cGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCtt                                                                                                                         >  2:1018636/1‑126 (MQ=255)
                                                      cGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCtt                                                                                                                         <  1:1018636/126‑1 (MQ=255)
                                                              gCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGt                                                                                         >  1:429691/1‑150 (MQ=255)
                                                                tCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTg                                                                                       >  1:881990/1‑150 (MQ=255)
                                                                tCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTg                                                                                       >  1:992763/1‑150 (MQ=255)
                                                                   agcagcAGTTCGCAGCCCTGGCTTACCAGTGACAGATGGGTCAGCGATAGGTGGGCGAGCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGAGGCGGTGGGCTTGCGCAGGGAGCGGATATCCTTGATCACCGAGGTGGCg                                                                                    >  2:711840/1‑150 (MQ=255)
                                                                    gcagcaCTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCgg                                                                                   >  2:1939105/1‑150 (MQ=255)
                                                                    gcagcaCTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCgg                                                                                   <  2:429691/150‑1 (MQ=255)
                                                                       gcaCTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGaa                                                                                >  2:1163495/1‑150 (MQ=255)
                                                                       gcaCTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGaa                                                                                <  2:202381/150‑1 (MQ=255)
                                                                        caCTTCGCGGCCCTGGCTGACCGGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAAt                                                                               >  1:659353/1‑150 (MQ=255)
                                                                         aCTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATg                                                                              <  2:1294465/150‑1 (MQ=255)
                                                                           ttCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAgg                                                                                                                                                  >  1:1963753/1‑80 (MQ=255)
                                                                           ttCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAgg                                                                                                                                                  <  2:1963753/80‑1 (MQ=255)
                                                                              gcgGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCgca                                                                                                                    <  2:1218356/107‑1 (MQ=255)
                                                                              gcgGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCgca                                                                                                                    >  1:1218356/1‑107 (MQ=255)
                                                                                 gCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATc                                                                      <  2:7083/150‑1 (MQ=255)
                                                                                   ccTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGc                                                                    <  1:1744943/150‑1 (MQ=255)
                                                                                   ccTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACAGTGGCGGTGGGCTTGCGCAGGCAGCGGAGATCCGTGAGCACGGGGGTGGGGGGGGTGGTGAAAtagt                                                                    >  2:998953/1‑147 (MQ=255)
                                                                                      ggCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGcccc                                                                 >  1:2166991/1‑150 (MQ=255)
                                                                                         tGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCCTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGtt                                                              >  2:1659342/1‑150 (MQ=255)
                                                                                            ccAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGc                                                           <  2:1862508/150‑1 (MQ=255)
                                                                                             cAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGcc                                                          >  1:1997214/1‑150 (MQ=255)
                                                                                              aGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCggtg                                                         >  2:462286/1‑147 (MQ=255)
                                                                                              aGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCa                                                         <  2:639852/150‑1 (MQ=255)
                                                                                               gCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGt                                                                            >  1:1625092/1‑130 (MQ=255)
                                                                                               gCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGt                                                                            <  2:1625092/130‑1 (MQ=255)
                                                                                                cGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCAcc                                                       >  1:2055355/1‑150 (MQ=255)
                                                                                                    aGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAAc                                                   >  2:611965/1‑150 (MQ=255)
                                                                                                    aGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAAc                                                   >  1:180271/1‑150 (MQ=255)
                                                                                                    aGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAAc                                                   >  2:1868530/1‑150 (MQ=255)
                                                                                                       tGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGgc                                                <  1:1868530/150‑1 (MQ=255)
                                                                                                       tGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGgc                                                <  1:1163495/150‑1 (MQ=255)
                                                                                                        ggTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGgca                                               <  1:944790/150‑1 (MQ=255)
                                                                                                         gTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGgcag                                              <  2:992763/150‑1 (MQ=255)
                                                                                                          ttCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGgcagc                                             >  2:108530/1‑150 (MQ=255)
                                                                                                            cAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCAt                                           <  2:2055355/150‑1 (MQ=255)
                                                                                                                gACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGccc                                                                  <  1:2390901/123‑1 (MQ=255)
                                                                                                                gACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGccc                                                                  >  2:2390901/1‑123 (MQ=255)
                                                                                                                 aCAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCGCGTTCGCCACCGAACGGCAGCATCAGCg                                      >  1:1215870/1‑150 (MQ=255)
                                                                                                                      tcggCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGGAGCGGTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACg                                 <  1:24764/148‑1 (MQ=255)
                                                                                                                        ggCGATCAACCGCCAGATCAGGCCCTTGCGCAAGCGCACACGCACCGTGGCGGTGGGCTTGCGCAAGGAGCAGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTc                               <  1:420278/150‑1 (MQ=255)
                                                                                                                        ggCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTc                               >  1:2153167/1‑150 (MQ=255)
                                                                                                                            aTCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCgg                           <  1:2390077/150‑1 (MQ=255)
                                                                                                                                  cGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTtgctg                     <  1:1939105/150‑1 (MQ=255)
                                                                                                                                       gATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGt                >  2:1281676/1‑150 (MQ=255)
                                                                                                                                       gATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGt                <  2:659353/150‑1 (MQ=255)
                                                                                                                                         gtgtgCCCTTGGGCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGCATGGTGCAATTGTCCCGATCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTaa              >  1:892347/5‑150 (MQ=255)
                                                                                                                                         gtgtgCCCTTGGGCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTaa              >  1:1387448/5‑150 (MQ=255)
                                                                                                                                          tgtgCCCTTGGGCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTa               <  2:2158726/145‑1 (MQ=255)
                                                                                                                                          tgtgCCCTTGGGCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTa               >  1:2158726/4‑148 (MQ=255)
                                                                                                                                           aGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAgg            >  2:403669/1‑150 (MQ=255)
                                                                                                                                            ggCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCTAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGc           <  2:49581/150‑1 (MQ=255)
                                                                                                                                             gCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGcc          >  2:398766/1‑150 (MQ=255)
                                                                                                                                             gCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGACGCTGTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGcc          >  1:24261/1‑150 (MQ=255)
                                                                                                                                               ccTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGCCGa        <  1:569489/150‑1 (MQ=255)
                                                                                                                                               ccTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGCCGa        <  1:1281676/150‑1 (MQ=255)
                                                                                                                                               ccTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGCCGa        >  2:1086373/1‑150 (MQ=255)
                                                                                                                                                 ttGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGCCGATa      >  2:2268728/1‑150 (MQ=255)
                                                                                                                                                    cccAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGCCGATACTg   >  1:1101397/1‑150 (MQ=255)
                                                                                                                                                     ccAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGCCGATACTGa  >  1:2059818/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTTGATGCCGTTGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGCCGATACTGA  >  NC_002947/3492683‑3492981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑