| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,533,408 | C→T | 7.2% | L15F (CTC→TTC) | atoA → | 3‑oxoacid CoA‑transferase subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,533,408 | 0 | C | T | 7.2% | 235.3 / 7.5 | 83 | L15F (CTC→TTC) | atoA | 3‑oxoacid CoA‑transferase subunit A |
| Reads supporting (aligned to +/- strand): ref base C (40/37); new base T (3/3); total (43/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.37e-01 | |||||||||||
AATCGATGACGAAAACAAAATTAACAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGTTTCCAACAACTGCGGCGTGGACGGTTTT > NC_002947/3533259‑3533551 | aaTCGATGACGAAAACAAAATTAACAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGccc > 2:905539/1‑150 (MQ=255) tGACGAAAACAAAATTAACAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAg < 2:1555371/150‑1 (MQ=255) aCGAAAACAAAATTAACAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGc < 2:1579446/150‑1 (MQ=255) gAAAACAAAATTAACAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCTTCGAGGGCCt > 2:299796/1‑150 (MQ=255) gAAAACAAAATTAACAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCt > 1:335809/1‑150 (MQ=255) gAAAACAAAATTAACAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCt < 2:2291064/150‑1 (MQ=255) aaaCAAAATTAACAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCTTCGAGGGCCTgc < 1:299796/150‑2 (MQ=255) aaCAAAATTAACAAATCAGTCGCTTGCTGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGAc < 1:363693/150‑1 (MQ=255) aaCAAAATTAACAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGAc < 1:449672/150‑1 (MQ=255) aaaTTAACAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACGACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGac < 1:2221634/150‑1 (MQ=255) aCAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACAt < 2:2049577/149‑1 (MQ=255) aCAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACAt > 1:2049577/1‑149 (MQ=255) cAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGa > 2:857699/1‑150 (MQ=255) aaaTCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGa > 1:639050/1‑137 (MQ=255) aaaTCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGa < 2:639050/137‑1 (MQ=255) aaaTCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGAc < 1:544858/150‑1 (MQ=255) aaTCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGCCAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACg > 1:423451/1‑150 (MQ=255) tCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACCGCCTCGTCGGTTAAACAACTACAAAAGGCCGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGCCCTGACCGACAACATGACGGTACTg > 2:655157/1‑150 (MQ=255) gCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGc > 1:216964/1‑150 (MQ=255) gCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGc < 2:963101/150‑1 (MQ=255) ttGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCTTCGAGGGTCTgc > 1:1193/1‑125 (MQ=255) ttGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCTTCGAGGGCCTgc < 2:1193/126‑2 (MQ=255) ttGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCg < 1:905539/150‑1 (MQ=255) ttGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCg > 1:1569890/1‑150 (MQ=255) cGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCggtg < 1:857699/150‑1 (MQ=255) gTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGcc > 2:1686921/1‑118 (MQ=255) gTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGcc < 1:1686921/118‑1 (MQ=255) gTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCggtggt < 2:216964/150‑1 (MQ=255) aGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAg > 2:156063/1‑111 (MQ=255) aGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAg < 1:156063/111‑1 (MQ=255) aTGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGc > 1:1198029/1‑150 (MQ=255) gCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGc < 1:1615158/150‑1 (MQ=255) gCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGc < 2:622878/99‑1 (MQ=255) gCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGc > 1:622878/1‑99 (MQ=255) tCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATccc > 2:1781726/1‑150 (MQ=255) aCAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGaaaa > 1:38246/1‑150 (MQ=255) tcgtcgGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCGCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTAt < 1:1837639/150‑1 (MQ=255) cgGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGc < 2:1198029/150‑1 (MQ=255) ggTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGAc < 1:829681/97‑1 (MQ=255) ggTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGAc > 2:829681/1‑97 (MQ=255) ggTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCg < 2:335809/150‑1 (MQ=255) ttAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGaa > 2:379118/1‑150 (MQ=255) acaacTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCTTCGAGGGCCTgct > 1:792064/1‑77 (MQ=255) acaacTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCTTCGAGGGCCTgct < 2:792064/79‑3 (MQ=255) acaacTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCa > 1:56081/1‑150 (MQ=255) aacTACAAAAGGCGGATCAGTATGGCCGGACGGGACGGGCGTGTTGCAAACAATGAACAGGCGCTCTAAAGCGTGAGCGACAACATGACGGTACAGGTCGGTGGTTTCGGCGTGTCCGTCATCCCGGAAAACCTTATCAGCGAAATCAAg > 2:658188/1‑150 (MQ=255) aacTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCg < 1:1578513/118‑1 (MQ=255) aacTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCg > 2:1578513/1‑118 (MQ=255) aacTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAg < 1:1781726/150‑1 (MQ=255) aacTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAg > 1:1911040/1‑150 (MQ=255) aacTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAg < 2:1606880/150‑1 (MQ=255) tACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAgcgg > 1:602271/1‑150 (MQ=255) tACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAgcgg > 1:299060/1‑150 (MQ=255) aaaaGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAg < 1:1660381/64‑1 (MQ=255) aaaaGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAg > 2:1660381/1‑64 (MQ=255) aaaGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGa > 2:985351/1‑69 (MQ=255) aaaGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGa < 1:985351/69‑1 (MQ=255) aaGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGCAAACCTTATCAGCGAAAGCAAgcggcgcgg > 2:21333/1‑150 (MQ=255) aGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGc < 1:379118/150‑1 (MQ=255) cGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGt > 1:912438/1‑150 (MQ=255) cGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGt > 1:1822312/1‑150 (MQ=255) cGGACTGGACAAGCGCATTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATc > 1:2064326/1‑97 (MQ=255) cGGACTGGACAAGCGCATTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATc < 2:2064326/97‑1 (MQ=255) gACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTgg < 2:1569890/150‑1 (MQ=255) aCTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGt > 1:1807796/1‑150 (MQ=255) ggACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGTTTc < 2:38246/150‑1 (MQ=255) ggACAAGCGCGTTGAAACGTATCATCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGTTTc < 2:1159912/150‑1 (MQ=255) gACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCg > 2:1464392/1‑85 (MQ=255) gACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCg < 1:1464392/85‑1 (MQ=255) aaGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCggtg > 2:516549/1‑67 (MQ=255) aaGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCggtg < 1:516549/67‑1 (MQ=255) aaGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATc > 2:1963342/1‑111 (MQ=255) aaGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATc < 1:1963342/111‑1 (MQ=255) aaGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATAAAGCGGCGGGGCGTCAAGGGCCTGACCGTGGTTTCcaac > 2:802086/1‑150 (MQ=255) gTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGTTTCCAACAACTgc > 2:2076757/1‑150 (MQ=255) ttGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGTTTCCAACAACTgcg < 2:1822312/150‑1 (MQ=255) acccTATGAGAAGGCCCTTGAAGGCCTGACCGACAACATGACGGTACTTGCCGGTGGTTTCGGCCTGTGCGGCATCCCGAAAAACCTTATCAGTGAAATCAAGCGGCGCGGCGTCAAGGGACTGACCGTGGTTTCCAATAACTGTGGCGt < 2:78890/148‑1 (MQ=255) aaCCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGTTTCCAACAACTGCGGCGt > 1:469041/1‑150 (MQ=255) gccgaTGAGCGGGCGCTCGGAGGGGTGACGGACAATATGACGGTAGTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACAGTGGTTTCCAACAACTGCGGCGTg < 2:423451/146‑1 (MQ=255) cTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGTTTCCAACAACTGCGGCGTGGa > 2:1779004/1‑150 (MQ=255) cTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGTTTCCAACAACTGCGGCGTGGa > 2:2006592/1‑150 (MQ=255) tATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGTTTCCAACAACTGCGGCGTGGAc > 1:341754/1‑150 (MQ=255) aGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGTTTCCAACAACTGCGGCGTGGACGGtt > 2:496644/1‑150 (MQ=255) cAGGCCCTCGAAGGCCTGACCGAACACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGTTTCCAACAACTGCGGCGTGGACGGtttt > 1:933472/1‑150 (MQ=255) cccTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAAc > 2:145213/1‑71 (MQ=255) cccTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAAc < 1:145213/71‑1 (MQ=255) | AATCGATGACGAAAACAAAATTAACAAATCAGTCGCTTGCGGTGAAGATGTCTGCACACGCTCACCGACAGCCTCGTCGGTTAAACAACTACAAAAGGCGGATCAGCATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAGCAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCCGGTGGTTTCGGCCTGTGCGGCATCCCGGAAAACCTTATCAGCGAAATCAAGCGGCGCGGCGTCAAGGGCCTGACCGTGGTTTCCAACAACTGCGGCGTGGACGGTTTT > NC_002947/3533259‑3533551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |