| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,553,216 | T→A | 5.5% | L277Q (CTG→CAG) | PP_3137 → | group 2 family glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,553,216 | 0 | T | A | 5.5% | 270.4 / 4.7 | 91 | L277Q (CTG→CAG) | PP_3137 | group 2 family glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base T (41/44); new base A (3/2); total (44/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.54e-01 | |||||||||||
AGCCACCCGAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTACAAGTGA > NC_002947/3553069‑3553364 | agccaCCCGAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTgg < 1:141120/150‑1 (MQ=255) gccaCCCGAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGgc < 2:1380332/150‑1 (MQ=255) ccaCCCGAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGgcg > 2:240607/1‑150 (MQ=255) ccaCCCGAGCGGCATTGGCTGCGTGAGTCACGTCGGGACTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTAGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGgcg > 1:1001552/1‑150 (MQ=255) caCCCGAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGgcgc < 2:82944/150‑1 (MQ=255) ccGAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGcgcc < 1:1759580/150‑1 (MQ=255) cGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCgcggc < 2:169412/150‑1 (MQ=255) gCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCGGGGCATAGCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGGTCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGcggcgg > 2:118298/1‑150 (MQ=255) tGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAg > 1:1414341/1‑150 (MQ=255) ggCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGt < 2:2341027/150‑1 (MQ=255) gCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGgcgcgc < 2:557803/136‑1 (MQ=255) gCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGgcgcgc > 1:557803/1‑136 (MQ=255) gCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTg > 2:1381225/1‑150 (MQ=255) gCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGTCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGAc < 1:663326/150‑1 (MQ=255) gCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGAc > 2:1002898/1‑150 (MQ=255) gTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGAcgc > 1:291862/1‑150 (MQ=255) aGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGAcgcgcg < 2:2193911/150‑1 (MQ=255) gTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCga < 1:1000781/150‑1 (MQ=255) tCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGAGTTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCgag > 1:632905/1‑150 (MQ=255) tCGGGCGTTGTTGTGGGGGCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTg < 2:516433/150‑1 (MQ=255) cGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTgg < 1:1203346/150‑1 (MQ=255) gggCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGc < 1:424053/150‑1 (MQ=255) gggCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGc < 1:2077354/150‑1 (MQ=255) ggCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCt < 2:1847492/150‑1 (MQ=255) gCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTg > 1:1991876/1‑150 (MQ=255) cTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCa > 2:1066548/1‑150 (MQ=255) ttGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGcc > 1:583329/1‑150 (MQ=255) gtgGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCgt < 2:429433/150‑1 (MQ=255) cTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGCGCGCCAGgcgcacc > 1:312123/1‑100 (MQ=255) cTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGCGCGCCAGGCGcacc < 2:312123/103‑1 (MQ=255) ggCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTg > 1:893802/1‑132 (MQ=255) ggCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTg < 2:893802/132‑1 (MQ=255) aTACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTg > 2:412989/1‑150 (MQ=255) aTACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTAGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTg < 1:2299395/150‑1 (MQ=255) aTACCTTTGGTGATCGCGCTGGCCTGCCTGCTGAAGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTg > 1:466261/1‑150 (MQ=255) aCCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTggg < 2:583329/150‑1 (MQ=255) cTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGcc > 2:526407/1‑131 (MQ=255) cTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGcc < 1:526407/131‑1 (MQ=255) tttGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCaa < 2:211223/150‑1 (MQ=255) tttGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCaa > 1:1968623/1‑150 (MQ=255) gATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTgg > 1:1078287/1‑115 (MQ=255) gATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTgg < 2:1078287/115‑1 (MQ=255) gATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTccc > 1:862510/1‑150 (MQ=255) aTCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCGGCTGTTGCTGTTGCGCTACGCACTGGAGGCGGTGCGCCTGGGGCGCCGCGGGGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCg > 2:1128002/1‑150 (MQ=255) cgcTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGaaa < 2:1968623/150‑1 (MQ=255) gcTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAAt > 1:1177611/1‑150 (MQ=255) cctgcctgCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCg < 2:1414341/150‑1 (MQ=255) ctgcctgcTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCgg > 2:1710457/1‑150 (MQ=255) tgctgctgGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGgt < 2:2372747/118‑1 (MQ=255) tgctgctgGGCGGCTGGGGCCTGCTGTTGCTGTCGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGgt > 1:2372747/1‑118 (MQ=255) gctgctgGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACt < 1:1002898/150‑1 (MQ=255) tgGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGt < 2:1177611/150‑1 (MQ=255) ggcggttgCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTg > 2:1801171/8‑150 (MQ=255) gggCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCg < 1:2224409/92‑1 (MQ=255) gggCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCg > 2:2224409/1‑92 (MQ=255) gCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGCCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCAcc > 2:1735971/1‑150 (MQ=255) ctgttgctgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCtt < 1:1710457/150‑1 (MQ=255) gttgctgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGc > 2:1435961/1‑150 (MQ=255) gttgctgttgATCTACCCACTGCAGGCGGGGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTACAGGCCGTGTTCCTGGTGTTGGGCACGTTCCCCGAAATGCTCGGCGGACTGAATTGCCTGCGGCACCGCCGTGc < 2:1001552/150‑1 (MQ=255) ttgctgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCg > 2:2238177/1‑150 (MQ=255) ggctgttgATCTACCCACGGCAGGCGGTGCGGCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCATCTGAAGTTCCTGCGCCACCGCCTTGCgg < 2:721386/149‑1 (MQ=255) ctgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCt > 1:354139/1‑150 (MQ=255) tgttgATCTACCCACTGCGGGCGGTGCGCCGGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGTTg < 2:501935/150‑1 (MQ=255) tgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTg < 1:412989/150‑1 (MQ=255) tgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTg < 1:1735971/150‑1 (MQ=255) aTCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCaaa > 2:740456/1‑150 (MQ=255) aTCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCaaa > 1:1909601/1‑150 (MQ=255) tCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAAt > 1:1020339/1‑150 (MQ=255) tctcccACTGCAGGCGGTGCGCCTGGCGCGCCTCGGTGGCAAGTGGTCGCGCGAGAACTGGCTGCTGGCCGTGTTCCTGGTGTTGGGCAAGTCCCCGCACATGCTCGGCCAAAAGAAGTTGCTGCCCCACCGCCTTGCGGC‑GGCaaaatc < 2:87776/147‑4 (MQ=255) aCCCACTGCAGGCGGTGAGCCTGGCGCGACGCGGCTGCAAGTGGACGCGCTAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCgg < 2:632905/150‑1 (MQ=255) cccACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTccc < 2:2337023/93‑1 (MQ=255) cccACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTccc > 1:2337023/1‑93 (MQ=255) cccACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGc > 1:1199924/1‑150 (MQ=255) cccACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGc < 1:240607/150‑1 (MQ=255) cccACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGc > 2:108425/1‑150 (MQ=255) ccACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCgaga > 1:87776/1‑147 (MQ=255) ccACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCt > 1:1860037/1‑150 (MQ=255) aCTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCttt > 1:503424/1‑150 (MQ=255) aCTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCttt > 2:66727/1‑150 (MQ=255) gccgcggcgCGCCAGGCGCACCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCGACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATc > 1:2108300/4‑150 (MQ=255) cAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATc < 2:354139/150‑1 (MQ=255) ggCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGa < 2:503424/150‑1 (MQ=255) ggCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGa > 1:2361246/1‑150 (MQ=255) ggCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGa < 1:1381225/150‑1 (MQ=255) ggCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGa < 2:1538487/150‑1 (MQ=255) gcggcgCGCCAGGCGCACCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTg < 1:1994556/130‑1 (MQ=255) gcggcgCGCCAGGCGCACCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTg > 2:1994556/1‑130 (MQ=255) gcCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTACAAGt > 1:1385165/1‑150 (MQ=255) gcCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTACAAGt < 1:2238177/150‑1 (MQ=255) ccTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTACAAGTg < 2:291862/150‑1 (MQ=255) cTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGCGTACAAGTga < 2:1199924/150‑1 (MQ=255) tGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTa > 1:195407/1‑142 (MQ=255) tGGCGCGCCGCGGCGGCAAGGGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTa < 2:195407/142‑1 (MQ=255) | AGCCACCCGAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTACAAGTGA > NC_002947/3553069‑3553364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |