| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,584,942 | A→C | 5.6% | intergenic (+46/‑89) | benC → / → benD | benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,584,942 | 0 | A | C | 5.6% | 266.2 / 6.6 | 89 | intergenic (+46/‑89) | benC/benD | benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (40/44); new base C (2/3); total (42/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.05e-01 | |||||||||||
TGTGCGGCCCGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCACCGGTGCCGCCCAA > NC_002947/3584793‑3585081 | tgtgCGGCCCGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGa < 2:236112/150‑1 (MQ=255)tgtgCGGCCCGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGa < 1:1405665/150‑1 (MQ=255) tgCGGCCCGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGTATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCGGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGc < 1:2295431/150‑1 (MQ=255) cccGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCt < 2:2361719/150‑1 (MQ=255) ccGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCTCGCCCGCTc < 1:986525/150‑1 (MQ=255) cGCCACCAATCGTAGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCGGGCACAGGCGCGA‑GGCGATAGGTTTGCGGCTCCGGCCTGACGCTCCCTCCTTCAAAGTATGCCGCCGACCCTGTGGGAGCGGGCGAGCCCGCTcc < 1:1749465/150‑1 (MQ=255) ccccATGGTGGAAGCGGTCAGCCAGTACGGGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCcaca < 2:2360550/149‑1 (MQ=255) ccATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGt > 1:681045/1‑150 (MQ=255) cATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTg > 2:2102509/1‑150 (MQ=255) tggAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATcgc < 2:1462845/150‑1 (MQ=255) aaGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCa < 1:2209909/150‑1 (MQ=255) tCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGATGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCttt < 1:138088/150‑1 (MQ=255) aGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCa > 1:660785/1‑150 (MQ=255) aGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCa > 2:2380337/1‑150 (MQ=255) gCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAg < 2:691026/150‑1 (MQ=255) ccAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCg > 1:1025303/1‑121 (MQ=255) ccAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCg < 2:1025303/121‑1 (MQ=255) tACGTGCGTGAGCAGGGCATTCCCCCGTC‑CAACTTCTAGTAGGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCttt < 1:2061260/150‑1 (MQ=255) tACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCttt < 1:2380337/150‑1 (MQ=255) tACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCttt > 2:1965766/1‑150 (MQ=255) tACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCttt < 1:1545875/150‑1 (MQ=255) cgtgcgtgAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGa > 2:2001596/1‑150 (MQ=255) tgcgtgAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGc < 1:401301/150‑1 (MQ=255) tgAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCcaca > 2:764785/1‑117 (MQ=255) tgAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCcaca < 1:764785/117‑1 (MQ=255) cAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGt < 1:2102509/150‑1 (MQ=255) agtgCATCACCCCGGC‑CAACATCTACGACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGATCGGGCGAGACCGCGCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAATAGAGtt < 2:818390/147‑1 (MQ=255) ggCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTtgc > 1:2369550/1‑150 (MQ=255) ggCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGACGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTtgc > 1:1194854/1‑150 (MQ=255) cATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGACTtgctg < 2:1901030/150‑1 (MQ=255) cATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCAGACCCTGTGGGAGCGGGCGAGCCCGc > 2:626288/1‑101 (MQ=255) cATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCAGACCCTGTGGGAGCGGGCGAGCCCGc < 1:626288/101‑1 (MQ=255) ttACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGcc > 2:1995982/1‑150 (MQ=255) aCCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGTGCAAGAGAGTTGCTGCcac > 2:1161908/1‑150 (MQ=255) ccccGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCttt < 2:1308151/128‑1 (MQ=255) ccccGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCttt > 1:1308151/1‑128 (MQ=255) ccccGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCcaca > 1:335855/1‑150 (MQ=255) cccGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTGAGCCTGTGAGCAAGAGAGTTGCTGCCACAg > 1:2365/1‑150 (MQ=255) ccGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAgg < 1:2001596/150‑1 (MQ=255) ccGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAgg < 1:2369082/150‑1 (MQ=255) ccGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGCCGCGGCCACAgg < 1:329393/150‑1 (MQ=255) cAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGtctc > 2:1266034/1‑150 (MQ=255) aaaCTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGGCACAGGGtctc > 2:580598/2‑150 (MQ=255) aCTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGtctctc < 1:1266034/150‑1 (MQ=255) tactacGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGaa < 1:2391719/150‑1 (MQ=255) tacGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCaa > 2:1153183/1‑117 (MQ=255) tacGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCaa < 1:1153183/117‑1 (MQ=255) tacGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTg < 1:621307/150‑1 (MQ=255) tacGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTg > 2:621307/1‑150 (MQ=255) cGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGga > 2:1352101/1‑150 (MQ=255) cGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGga < 2:974559/150‑1 (MQ=255) cGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGga < 1:1995982/150‑1 (MQ=255) gagaAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGtct > 1:1066073/1‑136 (MQ=255) gagaAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGtct < 2:1066073/136‑1 (MQ=255) gagaAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGgag > 2:326116/1‑150 (MQ=255) agaAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCTCGCCCGCt < 2:2397910/76‑1 (MQ=38) agaAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCTCGCCCGCt > 1:2397910/1‑76 (MQ=38) gaAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAgg < 2:408066/130‑1 (MQ=255) gaAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAgg > 1:408066/1‑130 (MQ=255) ttGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTCCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACa < 2:681045/150‑1 (MQ=255) tgcggctgcggcCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGACGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACat < 2:1194854/150‑1 (MQ=255) cggctgcggcCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACatat < 2:2369550/150‑1 (MQ=255) tgcggcCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGaac > 1:518987/1‑150 (MQ=255) cggcCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCCCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTcgc > 2:557830/1‑125 (MQ=255) cggcCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCCCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTcgc < 1:557830/125‑1 (MQ=255) ggcCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGaacaac < 1:326116/150‑1 (MQ=255) gcCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAacaaca > 2:1248692/1‑150 (MQ=255) gCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCttt < 1:1263808/75‑1 (MQ=255) gCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCttt > 2:1263808/1‑75 (MQ=255) cTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCcaa > 2:1859993/1‑150 (MQ=255) tCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCcaag < 1:1352101/150‑1 (MQ=255) ccTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCcaaggg > 1:2317784/1‑149 (MQ=255) tGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCACGGGCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCcaaggcaa > 1:561116/1‑150 (MQ=255) ttCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCa < 1:1743509/60‑1 (MQ=255) ttCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCa > 2:1743509/1‑60 (MQ=255) aaaGCAGTAGGCCGACCCTGCTGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGc < 2:518987/150‑1 (MQ=255) aaGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCa < 1:1204943/64‑1 (MQ=255) aaGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCa > 2:1204943/1‑64 (MQ=255) gCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATGTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCt > 1:1230628/1‑150 (MQ=255) aaTACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTgg > 1:277155/1‑150 (MQ=255) aaTACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTgg > 1:1788093/1‑150 (MQ=255) gCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCAcc > 1:576014/1‑150 (MQ=255) cGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACAAATGAACTACAGATTCCAAGGCAAGGTTGCCCTGGTCACCgg > 1:739046/1‑150 (MQ=255) gACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTg > 1:773120/1‑141 (MQ=255) gACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTg < 2:773120/141‑1 (MQ=255) aCCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAAc > 1:98354/1‑94 (MQ=255) aCCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAAc < 2:98354/94‑1 (MQ=255) tgtgGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCACCGGTgccgc < 2:335855/150‑1 (MQ=255) tgGGAGCGGGCTCGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCcaag > 2:132172/1‑120 (MQ=255) tgGGAGCGGGCTCGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCcaag < 1:132172/120‑1 (MQ=255) gaaGCGGGCGAGCACGCACCCACAGTGATCGCACGGCGTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCACCGGTGCCGCCCaa < 2:1230628/148‑1 (MQ=255) | TGTGCGGCCCGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGC‑CAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAGCGGGCGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTGCTGCCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCACCGGTGCCGCCCAA > NC_002947/3584793‑3585081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |