| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,587,752 | T→G | 5.2% | V182G (GTT→GGT) | catA‑II → | catechol 1,2‑dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,587,752 | 0 | T | G | 5.2% | 436.1 / 11.2 | 136 | V182G (GTT→GGT) | catA‑II | catechol 1,2‑dioxygenase |
| Reads supporting (aligned to +/- strand): ref base T (67/61); new base G (4/3); total (72/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.33e-01 | |||||||||||
Only 100 of 145 total aligned reads displayed.
CACGGTGATGTTCCTGGAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGGCGCACGTGCACTTCTTTATCTCGGCCCCAG > NC_002947/3587603‑3587901 | aCGGTGATGTTCCTGGAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGtt > 1:2093235/1‑150 (MQ=255) aCGGTGATGTTCCTGGAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGtt > 2:266993/1‑150 (MQ=255) ggTGATGTTCCTGGAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTAc < 1:1836774/150‑1 (MQ=255) tGATGTTCCTGGAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCg > 1:2387360/1‑150 (MQ=255) aTGTTCCTGGAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGAt < 2:450143/150‑1 (MQ=255) gTTCCTGGAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGc < 2:2364523/150‑1 (MQ=255) tCCTGGAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGGTAACGATGcgc < 1:1097645/150‑3 (MQ=255) cTGGAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGACGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAg > 2:1411559/1‑150 (MQ=255) tGGAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAgg > 1:1865510/1‑150 (MQ=255) tGGAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCCTTACCGATGCCCAgg > 2:554578/1‑150 (MQ=255) gAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAgggg > 2:2206045/1‑150 (MQ=255) aaGGCCAGGTGCTGGACCCGCCCGGACGCGCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGgc < 1:731687/150‑1 (MQ=255) cAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGGTAACGATGcgcc > 2:308188/1‑137 (MQ=255) gTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACcgc < 2:2093235/150‑1 (MQ=255) ccGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCATACACACTCAATCGGACCATCGCTAATGACGCCCACGGGCGCTACCTCGCGCGCTcc > 2:872900/1‑150 (MQ=255) gCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGcccggt < 1:2269100/128‑4 (MQ=255) gCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAgg > 2:2269100/1‑128 (MQ=255) ggACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAACACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTg < 2:1740163/150‑1 (MQ=255) cccGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATc < 2:1808209/150‑1 (MQ=255) ccGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCg < 2:1275869/150‑1 (MQ=255) ccGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCg > 1:1099413/1‑150 (MQ=255) ccGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCg > 1:1669536/1‑150 (MQ=255) gCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCggg < 1:1159368/150‑1 (MQ=255) gCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTa < 1:836560/150‑1 (MQ=255) ccGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTAt > 2:1671623/1‑150 (MQ=255) gTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCt < 1:1392643/150‑1 (MQ=255) ccACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCCACGCCAGTCGGCGTCCACCATGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCg > 1:1498068/1‑150 (MQ=255) cACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTGGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGa > 1:561988/1‑150 (MQ=255) cACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGa > 1:685494/1‑150 (MQ=255) cACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGa > 2:1183794/1‑150 (MQ=255) cACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGa > 1:1796696/1‑150 (MQ=255) aCGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGc > 2:2104952/1‑98 (MQ=255) aggTCGACC‑GTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTAt > 2:1688695/2‑139 (MQ=255) aggTCGACC‑GTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTAt < 1:1688695/138‑1 (MQ=255) tgtgGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGc < 2:412870/150‑1 (MQ=255) gCATGGGAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAAc > 2:2213193/1‑150 (MQ=255) gCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAgg > 1:2334375/1‑89 (MQ=255) gCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAAc > 1:1401680/1‑150 (MQ=255) cATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAAcc > 2:875936/1‑150 (MQ=255) gCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGa < 1:766888/77‑1 (MQ=255) gCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGa > 2:766888/1‑77 (MQ=255) gCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAg < 2:685494/150‑1 (MQ=255) cAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCaa < 1:1297630/143‑1 (MQ=255) cAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCaa > 2:1297630/1‑143 (MQ=255) aCCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGTGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGc < 2:293520/150‑1 (MQ=255) aCCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGc < 2:1865510/150‑1 (MQ=255) cccGTGGTACCTACTCGTTCTTCGACCAAAGCCAGCCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGcc < 1:1334197/150‑1 (MQ=255) ccGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGc > 1:555769/1‑134 (MQ=255) ccGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCt > 1:786111/1‑150 (MQ=255) ccGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCt > 2:582031/1‑150 (MQ=255) ccGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCt > 1:280086/1‑150 (MQ=255) ccGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCt < 2:786111/150‑1 (MQ=255) ggTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGAc < 1:1536363/150‑1 (MQ=255) aCCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCt > 2:1743214/1‑143 (MQ=255) aCCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACctg < 2:2387360/150‑1 (MQ=255) cTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGt < 1:206123/93‑1 (MQ=255) cTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGt > 2:206123/1‑93 (MQ=255) cTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTAt < 1:526801/106‑1 (MQ=255) cTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCt > 2:966933/1‑141 (MQ=255) cTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCt < 1:966933/141‑1 (MQ=255) cTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACctgct > 2:1504918/1‑150 (MQ=255) cTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTAc > 1:659042/1‑54 (MQ=255) tCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTAt > 2:485779/1‑102 (MQ=255) tCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTAt < 1:485779/102‑1 (MQ=255) tCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGc > 1:850690/1‑150 (MQ=255) gTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGc > 2:1672264/1‑97 (MQ=255) gTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCg > 2:1066360/1‑150 (MQ=255) tcttcGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTc < 1:68944/150‑1 (MQ=255) ttcGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCg < 1:2243130/90‑1 (MQ=255) ttcGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCAt < 2:2346569/150‑1 (MQ=255) ttcGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCAt > 2:1180194/1‑150 (MQ=255) ttcGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCAt > 1:2346569/1‑150 (MQ=255) gACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGc > 2:954954/1‑150 (MQ=255) gACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGc > 1:1107757/1‑150 (MQ=255) aaaGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCt > 2:1397794/1‑93 (MQ=255) aaaGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAgc < 1:1248988/150‑1 (MQ=255) aaaGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAg > 2:305329/1‑149 (MQ=255) aaaGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAg < 1:305329/149‑1 (MQ=255) gCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGcc > 1:1239527/1‑150 (MQ=255) ccAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGccc > 1:1711951/1‑150 (MQ=255) gTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTcc < 2:180804/64‑1 (MQ=255) gTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTcc > 1:180804/1‑64 (MQ=255) gTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGgc > 2:533/1‑150 (MQ=255) tCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGgcg > 2:348303/1‑150 (MQ=255) tACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGGCGCACGTg > 1:1283877/1‑150 (MQ=255) cTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGccc < 2:681937/134‑1 (MQ=255) cTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGGCGCACGTg < 1:335722/144‑1 (MQ=255) ccctgggcATCGGTAACGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGGCGCACGTGCACTTCTTTa > 2:1486418/7‑150 (MQ=255) cGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGGCGCACGTGCACTTCTTTAtc < 2:561988/150‑1 (MQ=255) cGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGGCGCACGTGCACTTCTTTAtc < 2:2256881/150‑1 (MQ=255) gggcATCGGTAACGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGGCGCACGTGCACTTCTTTAtctc > 1:1356847/3‑150 (MQ=255) cATCGGTAACGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTgg < 1:417239/104‑1 (MQ=255) gTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGGCGCACGTGCACTTCTTTATCTCg < 1:1150167/144‑1 (MQ=255) gTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGGCGCACGTGCACTTCTTTATCTCg > 2:1150167/1‑144 (MQ=255) ttACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAAt < 1:1842664/84‑1 (MQ=255) ttACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAAt < 1:643818/84‑1 (MQ=255) ttACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAAt > 2:643818/1‑84 (MQ=255) ttACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAAt > 2:1842664/1‑84 (MQ=255) ttACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGGCGCACGTGCACTTCTTTATCTCGGCCCCAg < 2:1107757/150‑1 (MQ=255) ttACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGGCGCACGTGCACTTCTTTATCTCGGCCCCAg < 2:1107864/150‑1 (MQ=255) | CACGGTGATGTTCCTGGAAGGCCAGGTGCTGGACCCGCACGGACGCCCGCTGCCGGGTGCCACGGTCGACCTGTGGCATGCCAATACCCGTGGTACCTACTCGTTCTTCGACCAAAGCCAGTCGGCGTACAACCTGCGTCGGCGCATCGTTACCGATGCCCAGGGGCGCTACCGCGCGCGCTCCATCGTGCCATCGGGCTATGGCTGCGACCCGCAGGGGCCAACCCAGGAATGCCTGGACCTGCTGGGCCGTCATGGCCAGCGCCCGGCGCACGTGCACTTCTTTATCTCGGCCCCAG > NC_002947/3587603‑3587901 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |