BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,593,801	G→A	5.3%	R265H (CGC→CAC)	PP_3171 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,593,801	0	G	A	5.3%	349.8 / 6.1	114	R265H (CGC→CAC)	PP_3171	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (57/50); new base A (2/4); total (59/55)
Fisher's exact test for biased strand distribution p-value = 4.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 116 total aligned reads displayed.

ATGAACCTGTTCGCCGCTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGG  >  NC_002947/3593653‑3593946

aTGAACCTGTTCGCCGCTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAgcgc                                                                                                                                                  >  2:681695/1‑150 (MQ=255)

  gAACCTGTTCGCCGCTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAgcgcgc                                                                                                                                                >  2:1914164/1‑150 (MQ=255)

      cTGTTCGCCGCTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTg                                                                                                                                            >  2:505396/1‑150 (MQ=255)

            gccgcTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGAt                                                                                                                                      <  1:258367/150‑1 (MQ=255)

            gccgcTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCACGGCGCGCTCgtg                                                                                                                                      <  1:1284388/150‑3 (MQ=255)

               gcTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAg                                                                                                                                   >  1:2130678/1‑150 (MQ=255)

                cTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAgg                                                                                                                                  <  1:1878837/150‑1 (MQ=255)

                cTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAgg                                                                                                                                  <  1:1897937/150‑1 (MQ=255)

                 tGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCACGGCGCGCTCgtggtccg                                                                                                                                 <  2:1237869/150‑8 (MQ=255)

                     aGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATg                                                                                                                             >  1:1843034/1‑150 (MQ=255)

                      gCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATgg                                                                                                                            <  1:681695/150‑1 (MQ=255)

                        gATGCTGAGGCGGACTCCCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGcc                                                                                                                          <  2:1757210/150‑1 (MQ=255)

                         aTGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGTCGGACCACGCGCGCGCCGTGCTCGATCAGGTGATGGCCt                                                                                                                         >  2:1038337/1‑150 (MQ=255)

                          tGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTg                                                                                                                        <  1:605771/150‑1 (MQ=255)

                          tGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTg                                                                                                                        <  1:605723/150‑1 (MQ=255)

                             tGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACAACGAGCACGGCGCGCTCgtg                                                                                                                                      >  2:1881488/1‑131 (MQ=255)

                                   ggACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCTAGCCGCAAGAGGGCTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGc                                                                                                               >  1:781870/1‑150 (MQ=255)

                                   ggACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGa                                                                                                                               <  2:1194888/134‑1 (MQ=255)

                                   ggACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGa                                                                                                                               >  1:1194888/1‑134 (MQ=255)

                                   ggACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAACCCGCCAGGAGGCACCCCAGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGAGATGGCCTTCTCCGTAGc                                                                                                               >  1:171627/1‑150 (MQ=255)

                                         ccTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAgg                                                                                                         >  1:1103405/1‑150 (MQ=255)

                                         ccTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCATGCTCGATCAg                                                                                                                                   >  2:316579/1‑124 (MQ=255)

                                         ccTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCATGCTCGATCAg                                                                                                                                   <  1:316579/124‑1 (MQ=255)

                                          cTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAggg                                                                                                        >  2:2189498/1‑150 (MQ=255)

                                           ctgCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGc                                                                                                       >  2:1444734/3‑150 (MQ=255)

                                             gCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGccc                                                                                                     <  2:1843034/150‑1 (MQ=255)

                                                   tCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACgg                                                                                               >  2:2171844/1‑150 (MQ=255)

                                                    cccACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACggg                                                                                              <  1:577794/150‑1 (MQ=255)

                                                       cccGCAAGTGGATGCTGGAACTGCATGTCGGGCGCGTTGGCTTTCTGCCCAAGCCGCCAGAGGCTCTTC‑CGATCTGGTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGa                                                                                           <  1:2223352/149‑1 (MQ=255)

                                                       aCCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGt                                                                                             >  2:1862393/1‑148 (MQ=255)

                                                       aCCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGt                                                                                             <  1:1862393/148‑1 (MQ=255)

                                                        ccGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAg                                                                                          <  2:2179382/150‑1 (MQ=255)

                                                           cAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAgg                                                                                         <  2:2385097/148‑1 (MQ=255)

                                                           cAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAgg                                                                                         >  1:2385097/1‑148 (MQ=255)

                                                              gTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAgg                                                                                    <  1:384732/150‑1 (MQ=255)

                                                                 gATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCt                                                                                 <  1:245834/150‑1 (MQ=255)

                                                                 gATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCt                                                                                 >  1:699333/1‑150 (MQ=255)

                                                                  aTGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTg                                                                                <  1:505396/150‑1 (MQ=255)

                                                                      tGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGCTTTAGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGcgct                                                                            >  1:1233710/1‑150 (MQ=255)

                                                                      tGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACg                                                                                                <  2:2389797/130‑1 (MQ=255)

                                                                      tGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGcgct                                                                            >  2:630251/1‑150 (MQ=255)

                                                                           cTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGGGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTg                                                                       >  1:639161/1‑150 (MQ=255)

                                                                           cTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GATTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTg                                                                       >  2:1558811/1‑150 (MQ=255)

                                                                            tGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGa                                                                      <  2:2130678/150‑1 (MQ=255)

                                                                              cATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATc                                                                    <  1:544739/150‑1 (MQ=255)

                                                                               aTGTCGGGCGCTTTGGCTTGCTGCCCTCGCCGCAAGAGGGTTACCTCAAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCg                                                                   >  1:1872079/1‑150 (MQ=255)

                                                                                tGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGc                                                                                                                                           <  1:1985237/77‑1 (MQ=255)

                                                                                tGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGc                                                                                                                                           >  2:1985237/1‑77 (MQ=255)

                                                                                    gggCGCTTTGGCTTGCTGCCCAAGCCGCAAGCGCGTTAACTCGAAC‑CAAATATCAACCACAGGCGGGGCGGGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAg                                                              >  1:1855155/1‑150 (MQ=255)

                                                                                    gggCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAg                                                              >  2:452590/1‑150 (MQ=255)

                                                                                    gggCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAg                                                              >  1:81481/1‑150 (MQ=255)

                                                                                      gcgcTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGc                                                                                                       <  2:2219240/107‑1 (MQ=255)

                                                                                      gcgcTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGc                                                                                                       >  1:2219240/1‑107 (MQ=255)

                                                                                          tttGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAg                                                                 >  2:789875/1‑141 (MQ=255)

                                                                                          tttGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAg                                                                 <  1:789875/141‑1 (MQ=255)

                                                                                          tttGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCggg                                                        >  2:56477/1‑150 (MQ=255)

                                                                                          tttGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCggg                                                        >  1:663250/1‑150 (MQ=255)

                                                                                            gggCTTGCTGCCCAAGCCGCAAGAGGGTTGCCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGc                                                      <  1:2362540/149‑1 (MQ=255)

                                                                                              gCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAgg                                                                                                                                  >  1:2175107/1‑72 (MQ=255)

                                                                                              gCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAgg                                                                                                                                  <  2:2175107/72‑1 (MQ=255)

                                                                                               cTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCACACACCGGAACTCCAGTGGCTTTGCTCGCTGATCGAGCAGACCGGGGCGGa                                                   >  1:2340147/1‑150 (MQ=255)

                                                                                                ttGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTACCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGAc                                                  >  1:910402/1‑150 (MQ=255)

                                                                                                  gctgcCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGa                                                                                           <  1:894180/107‑1 (MQ=255)

                                                                                                  gctgcCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGa                                                                                           >  2:894180/1‑107 (MQ=255)

                                                                                                    tgcCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGc                                              >  1:793542/1‑150 (MQ=255)

                                                                                                     gcCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCt                                             >  1:156190/1‑150 (MQ=255)

                                                                                                       ccAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACAAACCAGACGTGTGCTATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAAAGGGCGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCtgg                                           <  1:1268593/150‑2 (MQ=255)

                                                                                                       caaaGCCGCAAGAGGGTTACCTCGAAC‑GGTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTGCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCtga                                           <  2:334052/148‑1 (MQ=255)

                                                                                                        cAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCtgat                                          >  2:1369310/1‑150 (MQ=255)

                                                                                                        cAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCtgat                                          <  1:2315052/150‑1 (MQ=255)

                                                                                                              gCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTgatgat                                       >  2:1317032/1‑147 (MQ=255)

                                                                                                              gCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTgatgat                                       <  1:1317032/147‑1 (MQ=255)

                                                                                                               cAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGACCTCGCGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGAc                                   <  2:584774/150‑1 (MQ=255)

                                                                                                                 agagGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCgg                                                                                                            >  2:719320/1‑75 (MQ=255)

                                                                                                                 agagGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTg                                 <  1:56477/150‑1 (MQ=255)

                                                                                                                  gagGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCg                                                                                                             <  2:2002249/73‑1 (MQ=255)

                                                                                                                  gagGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCg                                                                                                             >  1:2002249/1‑73 (MQ=255)

                                                                                                                   agGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGcc                               <  2:663250/150‑1 (MQ=255)

                                                                                                                     ggTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAg                                                                 <  1:2278558/114‑1 (MQ=255)

                                                                                                                     ggTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAg                                                                 >  2:2278558/1‑114 (MQ=255)

                                                                                                                      gTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCa                            >  1:621871/1‑150 (MQ=255)

                                                                                                                      gTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGCCCTACTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCa                            >  1:1634989/1‑150 (MQ=255)

                                                                                                                       ttACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCAt                           >  2:923844/1‑150 (MQ=255)

                                                                                                                           cTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCtga                                           >  2:175697/1‑130 (MQ=255)

                                                                                                                           cTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCAt                       >  1:1745199/1‑150 (MQ=255)

                                                                                                                           cTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCAt                       >  2:868094/1‑150 (MQ=255)

                                                                                                                             cGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGa                     <  1:868094/150‑1 (MQ=255)

                                                                                                                             cGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGa                     <  2:914301/150‑1 (MQ=255)

                                                                                                                                   gCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGc                >  2:1216054/1‑150 (MQ=255)

                                                                                                                                    cTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCt               <  1:2036643/150‑1 (MQ=255)

                                                                                                                                     ttGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGACCTGGTCCCCTAAGGGGGGGCCCGAACGGATGTGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTg              >  1:657105/1‑150 (MQ=255)

                                                                                                                                       gCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGgc            >  1:473955/1‑150 (MQ=255)

                                                                                                                                        ccGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTgatgat                                       <  2:1414976/122‑1 (MQ=255)

                                                                                                                                        ccGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTgatgat                                       >  1:1414976/1‑122 (MQ=255)

                                                                                                                                         cGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGgcgc          >  2:680008/1‑150 (MQ=255)

                                                                                                                                          ggACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGgcg           <  1:1789032/148‑1 (MQ=255)

                                                                                                                                             ccACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCa      >  1:1194212/1‑150 (MQ=255)

                                                                                                                                             ccACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCa      <  1:680008/150‑1 (MQ=255)

                                                                                                                                                cGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGGTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCg   <  2:1745199/150‑1 (MQ=255)

                                                                                                                                                 gAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCgg  <  1:1444734/150‑1 (MQ=255)

ATGAACCTGTTCGCCGCTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAAC‑GCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGG  >  NC_002947/3593653‑3593946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`