BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,593,804	C→G	5.8%	A266G (GCC→GGC)	PP_3171 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,593,804	0	C	G	5.8%	365.9 / 9.8	114	A266G (GCC→GGC)	PP_3171	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (56/50); new base G (3/4); total (59/55)
Fisher's exact test for biased strand distribution p-value = 7.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01

Only 100 of 119 total aligned reads displayed.

GAACCTGTTCGCCGCTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGG  >  NC_002947/3593655‑3593946

gAACCTGTTCGCCGCTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAgcgcgc                                                                                                                                                >  2:1914164/1‑150 (MQ=255)

    cTGTTCGCCGCTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTg                                                                                                                                            >  2:505396/1‑150 (MQ=255)

          gccgcTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGAt                                                                                                                                      <  1:258367/150‑1 (MQ=255)

          gccgcTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCACGGCGCGCTCgtg                                                                                                                                      <  1:1284388/150‑3 (MQ=255)

             gcTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAg                                                                                                                                   >  1:2130678/1‑150 (MQ=255)

              cTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAgg                                                                                                                                  <  1:1878837/150‑1 (MQ=255)

              cTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAgg                                                                                                                                  <  1:1897937/150‑1 (MQ=255)

               tGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCACGGCGCGCTCgtggtccg                                                                                                                                 <  2:1237869/150‑8 (MQ=255)

                   aGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATg                                                                                                                             >  1:1843034/1‑150 (MQ=255)

                     cGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGc                                                                                                                           <  1:1414207/150‑1 (MQ=255)

                      gATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGcc                                                                                                                          <  2:2125822/150‑1 (MQ=255)

                        tGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTg                                                                                                                        <  1:605723/150‑1 (MQ=255)

                        tGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTg                                                                                                                        <  1:605771/150‑1 (MQ=255)

                           tGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACAACGAGCACGGCGCGCTCgtg                                                                                                                                      >  2:1881488/1‑131 (MQ=255)

                           tGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACAACGAGCACGGCGCGCTCgtg                                                                                                                                      <  1:1881488/133‑3 (MQ=255)

                                 ggACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCTAGCCGCAAGAGGGCTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGc                                                                                                               >  1:781870/1‑150 (MQ=255)

                                 ggACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGa                                                                                                                               <  2:1194888/134‑1 (MQ=255)

                                 ggACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGa                                                                                                                               >  1:1194888/1‑134 (MQ=255)

                                 ggACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAACCCGCCAGGAGGCACCCCAGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGAGATGGCCTTCTCCGTAGc                                                                                                               >  1:171627/1‑150 (MQ=255)

                                       ccTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAgg                                                                                                         >  1:1103405/1‑150 (MQ=255)

                                       ccTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCATGCTCGATCAg                                                                                                                                   <  1:316579/124‑1 (MQ=255)

                                        cTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAggg                                                                                                        >  2:2189498/1‑150 (MQ=255)

                                         ctgCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGc                                                                                                       >  2:1444734/3‑150 (MQ=255)

                                           gCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGccc                                                                                                     <  2:1843034/150‑1 (MQ=255)

                                                 tCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACgg                                                                                               >  2:2171844/1‑150 (MQ=255)

                                                  cccACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACggg                                                                                              <  1:577794/150‑1 (MQ=255)

                                                     aCCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGt                                                                                             <  1:1862393/148‑1 (MQ=255)

                                                     aCCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGt                                                                                             >  2:1862393/1‑148 (MQ=255)

                                                     aCCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGa                                                                                           <  1:2189498/150‑1 (MQ=255)

                                                         cAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAgg                                                                                         >  1:2385097/1‑148 (MQ=255)

                                                         cAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAgg                                                                                         <  2:2385097/148‑1 (MQ=255)

                                                            gTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAgg                                                                                    <  1:384732/150‑1 (MQ=255)

                                                            gTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCACGGCGCGCTCgtg                                                                                                                                      >  1:523464/1‑98 (MQ=255)

                                                            gTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCACGGCGCGCTCgtg                                                                                                                                      <  2:523464/100‑3 (MQ=255)

                                                               gATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCt                                                                                 >  1:699333/1‑150 (MQ=255)

                                                               gATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCt                                                                                 <  1:245834/150‑1 (MQ=255)

                                                                    tGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGCTTTAGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGcgct                                                                            >  1:1233710/1‑150 (MQ=255)

                                                                    tGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACg                                                                                                <  2:2389797/130‑1 (MQ=255)

                                                                    tGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGcgct                                                                            >  2:630251/1‑150 (MQ=255)

                                                                         cTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGGGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTg                                                                       >  1:639161/1‑150 (MQ=255)

                                                                         cTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGATTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTg                                                                       >  2:1558811/1‑150 (MQ=255)

                                                                          tGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGa                                                                      <  2:2130678/150‑1 (MQ=255)

                                                                            cATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATc                                                                    <  1:544739/150‑1 (MQ=255)

                                                                             aTGTCGGGCGCTTTGGCTTGCTGCCCTCGCCGCAAGAGGGTTACCTCAAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCg                                                                   >  1:1872079/1‑150 (MQ=255)

                                                                              tGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGc                                                                                                                                           <  1:1985237/77‑1 (MQ=255)

                                                                              tGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGa                                                                  <  2:699333/150‑1 (MQ=255)

                                                                                  gggCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAg                                                              >  2:452590/1‑150 (MQ=255)

                                                                                  gggCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAg                                                              >  1:81481/1‑150 (MQ=255)

                                                                                    gcgcTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGc                                                                                                       >  1:2219240/1‑107 (MQ=255)

                                                                                    gcgcTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGc                                                                                                       <  2:2219240/107‑1 (MQ=255)

                                                                                        tttGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAGCGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCggg                                                        >  2:1388254/1‑150 (MQ=255)

                                                                                        tttGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAg                                                                 <  1:789875/141‑1 (MQ=255)

                                                                                        tttGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAg                                                                 >  2:789875/1‑141 (MQ=255)

                                                                                        tttGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCggg                                                        >  2:56477/1‑150 (MQ=255)

                                                                                        tttGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCggg                                                        >  1:663250/1‑150 (MQ=255)

                                                                                          gggCTTGCTGCCCAAGCCGCAAGAGGGTTGCCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGc                                                      <  1:2362540/149‑1 (MQ=255)

                                                                                           ggCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCg                                                     >  2:2315052/1‑150 (MQ=255)

                                                                                            gCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAgg                                                                                                                                  >  1:2175107/1‑72 (MQ=255)

                                                                                            gCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAgg                                                                                                                                  <  2:2175107/72‑1 (MQ=255)

                                                                                             cTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCACACACCGGAACTCCAGTGGCTTTGCTCGCTGATCGAGCAGACCGGGGCGGa                                                   >  1:2340147/1‑150 (MQ=255)

                                                                                              ttGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTACCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGAc                                                  >  1:910402/1‑150 (MQ=255)

                                                                                                gctgcCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGa                                                                                           <  1:894180/107‑1 (MQ=255)

                                                                                                gctgcCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGa                                                                                           >  2:894180/1‑107 (MQ=255)

                                                                                                   gcCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCt                                             >  1:156190/1‑150 (MQ=255)

                                                                                                     ccAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACAAACCAGACGTGTGCTATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAAAGGGCGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCtgg                                           <  1:1268593/150‑2 (MQ=255)

                                                                                                     caaaGCCGCAAGAGGGTTACCTCGAACGGTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTGCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCtga                                           <  2:334052/148‑1 (MQ=255)

                                                                                                      cAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCtgat                                          >  2:1369310/1‑150 (MQ=255)

                                                                                                      cAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCtgat                                          <  1:2315052/150‑1 (MQ=255)

                                                                                                         gCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTgatgat                                       <  1:630251/150‑1 (MQ=255)

                                                                                                            gCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTgatgat                                       >  2:1317032/1‑147 (MQ=255)

                                                                                                               agagGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCgg                                                                                                            <  1:719320/75‑1 (MQ=255)

                                                                                                               agagGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTg                                 <  1:56477/150‑1 (MQ=255)

                                                                                                                gagGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCg                                                                                                             <  2:2002249/73‑1 (MQ=255)

                                                                                                                 agGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGcc                               <  2:663250/150‑1 (MQ=255)

                                                                                                                   ggTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAg                                                                 >  2:2278558/1‑114 (MQ=255)

                                                                                                                   ggTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAg                                                                 <  1:2278558/114‑1 (MQ=255)

                                                                                                                     ttACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCAt                           >  2:923844/1‑150 (MQ=255)

                                                                                                                         cTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCtga                                           >  2:175697/1‑130 (MQ=255)

                                                                                                                         cTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCtga                                           <  1:175697/130‑1 (MQ=255)

                                                                                                                         cTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCAt                       >  2:868094/1‑150 (MQ=255)

                                                                                                                         cTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCAt                       >  1:1745199/1‑150 (MQ=255)

                                                                                                                          tCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATg                      >  1:914301/1‑150 (MQ=255)

                                                                                                                           cGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGa                     <  2:914301/150‑1 (MQ=255)

                                                                                                                           cGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGa                     <  1:868094/150‑1 (MQ=255)

                                                                                                                                gCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGc                >  2:1216054/1‑150 (MQ=255)

                                                                                                                                 cTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCt               <  1:2036643/150‑1 (MQ=255)

                                                                                                                                  ttGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGACCTGGTCCCCTAAGGGGGGGCCCGAACGGATGTGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTg              >  1:657105/1‑150 (MQ=255)

                                                                                                                                    gCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGgc            >  1:473955/1‑150 (MQ=255)

                                                                                                                                     ccGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTgatgat                                       >  1:1414976/1‑122 (MQ=255)

                                                                                                                                      cGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGgcgc          >  2:680008/1‑150 (MQ=255)

                                                                                                                                       ggACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGgcg           >  2:1789032/1‑148 (MQ=255)

                                                                                                                                       ggACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGgcg           <  1:1789032/148‑1 (MQ=255)

                                                                                                                                          ccACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCa      <  1:680008/150‑1 (MQ=255)

                                                                                                                                          ccACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCa      >  1:1194212/1‑150 (MQ=255)

                                                                                                                                             cGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGGTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCg   <  2:1745199/150‑1 (MQ=255)

                                                                                                                                              gAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCgg  <  1:1444734/150‑1 (MQ=255)

                                                                                                                                                   cgcCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCt               <  1:1420350/132‑1 (MQ=255)

                                                                                                                                                   cgcCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCt               >  2:1420350/1‑132 (MQ=255)

                                                                                                                                                    gcCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGgcgc          >  1:702936/1‑136 (MQ=255)

                                                                                                                                                    gcCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGgcgc          <  2:702936/136‑1 (MQ=255)

GAACCTGTTCGCCGCTGCCAGCGATGCTGAGGCGGACTACCTGGCCAGCTCCCACCGCAAGTGGATGCTGGACCTGCATGTCGGGCGCTTTGGCTTGCTGCCCAAGCCGCAAGAGGGTTACCTCGAACGCTTGCCGGACCACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGG  >  NC_002947/3593655‑3593946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`