| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,612,162 | A→T | 6.8% | I522N (ATT→AAT) | mcoA ← | Mn(II) copper oxidase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,612,162 | 0 | A | T | 6.8% | 251.4 / 7.0 | 84 | I522N (ATT→AAT) | mcoA | Mn(II) copper oxidase A |
| Reads supporting (aligned to +/- strand): ref base A (39/39); new base T (2/4); total (41/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.68e-01 | |||||||||||
CGGGCCTTTGAACTCACCGCTGTTACCGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAGGCATGGCTGAACCGCTTGGGAAGCGCAGGTT > NC_002947/3612017‑3612307 | cGGGCCTTTGAACTCACCGCTGTTACCGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTg < 2:1371248/150‑1 (MQ=255) gCCTTTGAACTCACCGCTGTTACCGGCAATCTCTCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTc > 1:915195/1‑150 (MQ=255) ccTTTGAACTCACCGCTGTTACCGGCAATCTCCCGCACCACGGCGAACTTGAAGTATCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCCCCTTGAGCCTGGTCTAGTACTGACAGTTGACCAGAATCtcggca > 2:858218/1‑145 (MQ=255) ccTTTGAACTCACCGCTGTTACCGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCa > 2:412278/1‑150 (MQ=255) ttGAACTCACCGCTGTTACCGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGATTCTGGTCaact < 2:1566988/150‑4 (MQ=255) tCACCGCTGTTACCGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAg > 2:2040390/1‑150 (MQ=255) tCACCGCTGTTACCGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAg > 2:161090/1‑150 (MQ=255) tCACCGCTGTTACCGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAg < 2:2342141/150‑1 (MQ=255) aCCGCTGTTACCGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGcc > 1:930578/1‑150 (MQ=255) aCCGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCAAACACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGtt > 1:410564/1‑150 (MQ=255) ccGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGAAACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTg > 1:650469/1‑150 (MQ=255) cGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGa > 2:1455898/1‑150 (MQ=255) cGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGa > 2:655050/1‑150 (MQ=255) cGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGa > 1:392167/1‑150 (MQ=255) aaTCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACgg < 1:412278/150‑1 (MQ=255) aaTCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACgg < 1:1126142/150‑1 (MQ=255) tctcCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGc > 1:1063705/1‑124 (MQ=255) tctcCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGc < 2:1063705/124‑1 (MQ=255) ccGCACCACGTCAAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGaa < 1:1012141/150‑1 (MQ=255) ccGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGtt > 2:1696549/1‑138 (MQ=255) ccGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGtt < 1:1696549/138‑1 (MQ=255) ccGCACCACGGCGAAATTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGaa < 2:182826/150‑1 (MQ=255) gCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGt < 1:2235328/144‑1 (MQ=255) gCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGt > 2:2235328/1‑144 (MQ=255) ggCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTg > 2:1690493/1‑150 (MQ=255) gCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCCCGCACCTTGAGCCTGGGCTTGTCCTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTgg < 2:1463896/150‑1 (MQ=255) gCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTgg > 2:956830/1‑150 (MQ=255) ttGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTg < 1:2040390/150‑1 (MQ=255) ttGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTg < 1:655050/150‑1 (MQ=255) aGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAgg > 2:66902/1‑104 (MQ=255) aGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAgg < 1:66902/104‑1 (MQ=255) gTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGccgtcc < 2:1751764/112‑1 (MQ=255) gTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGccgtcc > 1:1751764/1‑112 (MQ=255) gTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATc > 1:402284/1‑150 (MQ=255) gcgACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGaa > 1:1121849/1‑100 (MQ=255) gcgACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGaa < 2:1121849/100‑1 (MQ=255) gACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGATTCTGGTCaa < 1:118736/91‑2 (MQ=255) gACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGATTCTGGTCaa > 2:118736/1‑90 (MQ=255) acCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTg > 1:387911/1‑150 (MQ=255) gAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCg < 2:915195/150‑1 (MQ=255) gAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCg > 1:1226425/1‑150 (MQ=255) aGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATcc < 2:387922/137‑1 (MQ=255) aGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATcc > 1:387922/1‑137 (MQ=255) aGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTAAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCgg < 2:839490/150‑1 (MQ=255) ttGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATc < 1:2004457/150‑1 (MQ=255) ggagACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCa < 1:1720610/150‑1 (MQ=255) gaCGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGc < 2:498548/73‑1 (MQ=255) gaCGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGc > 1:498548/1‑73 (MQ=255) gaCGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGt > 2:461356/1‑150 (MQ=255) aCGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGtt < 1:1186884/150‑1 (MQ=255) ggAAACGGTAACTGCGCGCACGCACGTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTGGTCGGCAATCACCAGGTTGa > 1:529763/1‑150 (MQ=255) gAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGAc < 1:461356/150‑1 (MQ=255) aaaCGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAg > 1:249317/1‑71 (MQ=255) aaaCGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAg < 2:249317/71‑1 (MQ=255) gTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGa < 1:1514620/65‑1 (MQ=255) gTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGa > 2:1514620/1‑65 (MQ=255) gTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGGTTTGTCGGCAATCACCAGGTTGACGTCATa > 2:332662/1‑150 (MQ=255) gTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATa < 1:1690493/150‑1 (MQ=255) gcgcACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGt < 1:699338/150‑1 (MQ=255) cacgcacCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTAc < 1:453333/150‑1 (MQ=255) gcacCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGc < 1:2388487/115‑1 (MQ=255) gcacCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGc > 2:2388487/1‑115 (MQ=255) acCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGATGAAGCTGTCCGTGTTGAACGGGTTGAGCCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCaa < 1:161090/150‑1 (MQ=255) acCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGc < 2:2101238/88‑1 (MQ=255) acCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGc > 1:2101238/1‑88 (MQ=255) ccTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAg < 2:930578/150‑1 (MQ=255) cTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAgg > 1:2263543/1‑150 (MQ=255) ttGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCGGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAGGc > 1:174413/1‑150 (MQ=255) tGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAGGCa < 2:2263543/150‑1 (MQ=255) gAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTa < 2:2101243/139‑1 (MQ=255) gAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTa > 1:2101243/1‑139 (MQ=255) gAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAGGCAt < 2:392167/150‑1 (MQ=255) gAGCCTGGGCTTGTACGCCCAGTTGACGAGGTTCTGGTCGGAGCCGCTGGCAGACCTGGTGAACGTGTTGAACCACATCTGGCCACTGGCATCCCAGGCCTTGCCCGCACTAACCAGGTTGACGTCATAGTCACGGTTACCCCAAGGCAt < 2:529763/150‑1 (MQ=255) ggCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAGGCATGGCTGaa < 2:402284/150‑1 (MQ=255) aCTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAGGCATGGCTGAACCGCTTg < 1:956830/150‑1 (MQ=255) ccAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAGGCATGGCTGAACCGCTTGGGaa > 2:230113/1‑150 (MQ=255) aGTTGACCAGAATTTGGTCAGCGAGGAAGCCGTCCGTGTTGAAGGTGTTGAACCACACCTGGCCATTAGCATCCCAGGCTTTGTCGTCAATCACCAGGTTGACGGCATAATCACAGTTACACCAAGGCATAGCTGAACCGATTGGGAAgc > 2:1071766/1‑150 (MQ=255) tGACCAGATTCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGt > 2:7016/1‑45 (MQ=255) tGACCAGATTCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGt < 1:7016/45‑1 (MQ=255) gACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAGGCATGGCTGAACCGCTTGGGAAGCGCAg > 1:2138451/1‑150 (MQ=255) aCCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAGGCATGGCTGAACCGCTTGGGAAGCGCAgg < 2:1250115/150‑1 (MQ=255) cAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGAc > 1:943846/1‑96 (MQ=255) cAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGAc < 2:943846/96‑1 (MQ=255) cAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAGGCATGGCTGAACCGCTTGGGAAGCGCAGGtt > 1:1036808/1‑150 (MQ=255) | CGGGCCTTTGAACTCACCGCTGTTACCGGCAATCTCCCGCACCACGGCGAACTTGAAGTAGCGCGACACCGAGCCGTTGAGGAGACGGAAACGGTAACTGCGCGCACGCACCTTGAGCCTGGGCTTGTACTGCCAGTTGACCAGAATCTGGTCAGCGAGGAAGCCGTCCGTGTTGAACGGGTTGAACCACAGCTGGCCATTGGCATCCCAGGCTTTGTCGGCAATCACCAGGTTGACGTCATAGTCACGGTTACCCCAAGGCATGGCTGAACCGCTTGGGAAGCGCAGGTT > NC_002947/3612017‑3612307 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |