Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,615,435 C→G 5.4% S205R (AGC→AGG)  PP_3186 → transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,615,4350CG 5.4% 295.7 / 5.7 93S205R (AGC→AGG) PP_3186transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base C (40/48);  new base G (2/3);  total (42/51)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.87e-01

TACCGCGAGTGGATTGGCGAGTATGCCGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCT  >  NC_002947/3615289‑3615583
                                                                                                                                                  |                                                                                                                                                    
tACCGCGAGTGGATTGGCGAGTATGCCGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTg                                                                                                                                                   <  2:1514594/150‑1 (MQ=255)
 aCCGCGAGTGGATTGGCGAGTATGCCGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTgg                                                                                                                                                  >  1:436724/1‑150 (MQ=255)
  ccGCGAGTGGATTGGCGAGTATGCCGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGa                                                                                                                                                 <  1:660476/150‑1 (MQ=255)
   cgcgAGTGGATTGGCGAGTATGCCGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAg                                                                                                                                                <  1:283378/150‑1 (MQ=255)
        gTGGATTGGCGAGTATGCCGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGGCTGGAGGcctg                                                                                                                                           <  1:2353126/150‑4 (MQ=255)
        gTGGATTGGCGAGTATGCCGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGa                                                                                                                                           >  1:51464/1‑150 (MQ=255)
             ttGGCGAGTATGCCGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCTTCCAGCCTGGAGGCGGATTTCt                                                                                                                                      >  1:2027592/1‑150 (MQ=255)
               ggCGAGTATGCCGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCCgg                                                                                                                                    <  1:1822287/150‑1 (MQ=255)
                gCGAGTATGCCGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGCGGCGGATTTCCGGc                                                                                                                                   >  2:764529/1‑150 (MQ=255)
                       tGCCGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATggg                                                                                                                            <  1:1857245/150‑1 (MQ=255)
                          cGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGtt                                                                                                                         <  1:815170/150‑1 (MQ=255)
                           ggggAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGACAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTgg                                                                                                                                    >  2:841454/1‑138 (MQ=255)
                           ggggAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGACAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTgg                                                                                                                                    <  1:841454/138‑1 (MQ=255)
                              gAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCCGGCAAATGGGGTTGGAc                                                                                                                     <  1:764529/150‑1 (MQ=255)
                               aGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCACGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACg                                                                                                                    <  2:1745961/150‑1 (MQ=255)
                                gggCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGc                                                                                                                                              <  1:1563022/123‑1 (MQ=255)
                                gggCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGc                                                                                                                                              >  2:1563022/1‑123 (MQ=255)
                                 ggCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATgggg                                                                                                                           >  2:114866/1‑141 (MQ=255)
                                 ggCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATgggg                                                                                                                           <  1:114866/141‑1 (MQ=255)
                                  gCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGGCTGGAGGcct                                                                                                                                            <  2:2245645/123‑3 (MQ=255)
                                  gCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGGCTGGAGGcct                                                                                                                                            >  1:2245645/1‑121 (MQ=255)
                                  gCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTg                                                                                                                                                   >  2:1780813/1‑116 (MQ=255)
                                  gCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTg                                                                                                                                                   <  1:1780813/116‑1 (MQ=255)
                                    tACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGAcc                                                                                                               <  1:1938710/150‑1 (MQ=255)
                                    tACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGAcc                                                                                                               >  1:619656/1‑150 (MQ=255)
                                      ccAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCgt                                                                                                             <  1:379397/150‑1 (MQ=255)
                                             gTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAAcc                                                                                                      >  1:490432/1‑150 (MQ=255)
                                                gCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAAccgcc                                                                                                   >  2:643895/1‑150 (MQ=255)
                                                   gcagcaGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTg                                                                                                                                     <  2:533580/113‑1 (MQ=255)
                                                   gcagcaGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTg                                                                                                                                     >  1:533580/1‑113 (MQ=255)
                                                   gcagcaGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTg                                                                                                >  1:1612554/1‑150 (MQ=255)
                                                    cagcacCGCGCCATCATCTGGCTTCTCTGGCCGAGCGGAGCATGCCCGAGCAGCGGGTCGCCGAACGGGCAGGGATTTTTCGCCAGGCCTCAAGCCGGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTgg                                                                                               <  2:1031659/150‑1 (MQ=255)
                                                     agcagcGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGGCTGGAGGcctgg                                                                                                                                          <  1:1186856/106‑5 (MQ=255)
                                                     agcagcGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGGCTGGAGGcctgg                                                                                                                                          >  2:1186856/1‑102 (MQ=255)
                                                       cagcGCGCAAGCACCTCGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGTCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCt                                                                                            <  1:447476/150‑1 (MQ=255)
                                                         gcgcgcAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCtag                                                                                          <  2:1202538/150‑3 (MQ=255)
                                                          cgcgcAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTggg                                                                                         <  1:2389826/150‑1 (MQ=255)
                                                           gcgcAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGt                                                                                        <  1:728564/150‑1 (MQ=255)
                                                                aGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCCGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGAAGATGTAAACCGCCGTGGGCTGGGTGATta                                                                                   <  1:2244549/150‑1 (MQ=255)
                                                                  cACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGAtt                                                                                    <  1:785460/147‑1 (MQ=255)
                                                                  cACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGAtt                                                                                    >  2:785460/1‑147 (MQ=255)
                                                                  cACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATtact                                                                                 <  2:463144/150‑1 (MQ=255)
                                                                    ccTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATtactac                                                                               <  1:643895/150‑1 (MQ=255)
                                                                    ccTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATtactac                                                                               <  1:2119834/150‑1 (MQ=255)
                                                                     cTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcc                                                                              >  1:1064174/1‑150 (MQ=255)
                                                                       ggATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAccca                                                                            <  2:563682/150‑1 (MQ=255)
                                                                        gATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATtac                                                                                  >  1:723211/1‑143 (MQ=255)
                                                                        gATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATtac                                                                                  <  2:723211/143‑1 (MQ=255)
                                                                        gATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGTGATTACGAcccag                                                                           >  1:2310638/1‑150 (MQ=255)
                                                                               tGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATgg                                                                                                                             >  2:2359919/1‑93 (MQ=255)
                                                                               tGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGAATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATgg                                                                                                                             <  1:2359919/93‑1 (MQ=255)
                                                                                 gCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATg                                                                                                                              <  1:2249685/90‑1 (MQ=255)
                                                                                 gCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATg                                                                                                                              >  2:2249685/1‑90 (MQ=255)
                                                                                      gcgcAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAccca                                                                            >  2:1384577/1‑135 (MQ=255)
                                                                                      gcgcAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAccca                                                                            <  1:1384577/135‑1 (MQ=255)
                                                                                       cgcAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTg                                                            <  1:287761/150‑1 (MQ=255)
                                                                                           gcaTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGc                                                        >  1:101230/1‑150 (MQ=255)
                                                                                            caTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCAAGGCCTCCAGCCTAGAGGCGGATTTCTGGGAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCa                                                       >  1:2101934/1‑150 (MQ=255)
                                                                                             aTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCAt                                                      <  1:1085691/150‑1 (MQ=255)
                                                                                             aTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCAt                                                      >  1:1589698/1‑150 (MQ=255)
                                                                                              tGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATg                                                     <  2:51464/150‑1 (MQ=255)
                                                                                               gACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTgg                                                           >  2:1949374/1‑143 (MQ=255)
                                                                                               gACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTgg                                                           <  1:1949374/143‑1 (MQ=255)
                                                                                               gACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCAt                                                      <  2:688936/148‑1 (MQ=255)
                                                                                               gACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCAt                                                      >  1:688936/1‑148 (MQ=255)
                                                                                               gACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATgg                                                    <  2:1589698/150‑1 (MQ=255)
                                                                                                aCCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGAt                                                                                     >  1:569553/1‑116 (MQ=255)
                                                                                                aCCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGAt                                                                                     <  2:569553/116‑1 (MQ=255)
                                                                                                 ccGAGCAGCGGTTCGCCGAACTGGAAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTTGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTTACCAGTGCAGGGCCGCTTTGGTGCATGGgc                                                  <  2:490432/150‑1 (MQ=255)
                                                                                                      cagcGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGcc                                               >  2:1308125/1‑148 (MQ=255)
                                                                                                      cagcGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGcc                                               <  1:1308125/148‑1 (MQ=255)
                                                                                                             tCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa                                      <  2:2243449/150‑1 (MQ=255)
                                                                                                                ccGAACTGGCAGGGATTTTTTTCTATTTCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGTGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAttc                                   >  2:731995/1‑150 (MQ=255)
                                                                                                                 cGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAgtcg                                  >  1:1887968/1‑150 (MQ=255)
                                                                                                                   aaCTGGCAGGGATTTTTGGCAAGGCCTGCAGCCTAGCGGCAGTAATCTGCTGAGTGTGGGTGGACGGTACCGTGTAAACCGCCGTGGGCTGGGTGATTACTCCCCAGCCAAGGACCGCTTTCGTGCATACGGGCGTCAAAATAAgtcgtc                                <  2:1131232/150‑1 (MQ=255)
                                                                                                                      tGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCg                             >  1:2113203/1‑150 (MQ=255)
                                                                                                                          aGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGcaca                         >  1:1889732/1‑150 (MQ=255)
                                                                                                                                     gCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAACTGGGGTCGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGt              >  2:1039851/1‑150 (MQ=255)
                                                                                                                                     gCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGgc                                                  >  2:863302/1‑114 (MQ=255)
                                                                                                                                     gCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGgc                                                  <  1:863302/114‑1 (MQ=255)
                                                                                                                                     gCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGt              >  1:727340/1‑150 (MQ=255)
                                                                                                                                     gCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTAGGCTGGGTGAGGCGTAACCAGCCCAGGACAGCTTTGGAGCATGGGCACATCACAAGAAGTCTTCCCGCACACTCCGGTTCGt              >  1:1020997/1‑150 (MQ=255)
                                                                                                                                     gCCAGGCCGCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGt              <  2:436724/150‑1 (MQ=255)
                                                                                                                                      ccAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTc             >  2:1047824/1‑150 (MQ=255)
                                                                                                                                        aGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccagcccag                                                                      <  2:718518/91‑1 (MQ=255)
                                                                                                                                        aGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccagcccag                                                                      >  1:718518/1‑91 (MQ=255)
                                                                                                                                          gCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAACCCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGAt         <  2:1647052/150‑1 (MQ=255)
                                                                                                                                            cTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCg       >  2:1001/1‑150 (MQ=255)
                                                                                                                                             tCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAgtcgtc                                <  2:243779/124‑1 (MQ=255)
                                                                                                                                             tCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAgtcgtc                                >  1:243779/1‑124 (MQ=255)
                                                                                                                                               cAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAg    <  2:2027592/150‑1 (MQ=255)
                                                                                                                                                aGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCCCTTTGGGGAATGGGACCCTCAAAATAAGTCTTCCCGCACCCTCAAGATCGTCAGATCGCAGc   >  2:1018965/1‑150 (MQ=255)
                                                                                                                                                 gCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCt  <  2:619656/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
TACCGCGAGTGGATTGGCGAGTATGCCGGGGAGGGCTACCAAGGGGTGGCCGCAGCAGCGCGCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCT  >  NC_002947/3615289‑3615583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑