Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,630,708 T→A 6.9% L429Q (CTG→CAG)  PP_3200 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,630,7080TA 6.9% 281.5 / 9.0 87L429Q (CTG→CAG) PP_3200hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (43/38);  new base A (3/3);  total (46/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.43e-01

CGGTGAGTTGTCAACCCGCTGGAACCAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTCGAGCCGATG  >  NC_002947/3630562‑3630853
                                                                                                                                                  |                                                                                                                                                 
cGGTGAGTTGTCAACCCGCTGGAACCAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGa                                                                                                                                                <  1:1349223/150‑1 (MQ=255)
cGGTGAGTTGTCAACCCGCTGGAACCAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGGCTCCAGGCTGGCAAGCCAGGa                                                                                                                                                <  2:661802/150‑1 (MQ=255)
       ttGTCAACCCGCTGGAACCAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCAGGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAAc                                                                                                                                         >  1:519744/1‑150 (MQ=255)
       ttGTCAACCCGCTGGAACCAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAAc                                                                                                                                         <  2:2056710/150‑1 (MQ=255)
       ttGTCAACCCGCTGGAACCAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGACACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAAc                                                                                                                                         <  1:1939614/150‑1 (MQ=255)
          tCAACCCGCTGGAACCAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTc                                                                                                                                      >  1:2104322/1‑150 (MQ=255)
            aaCCCGCTGGAACCAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCAt                                                                                                                                    >  2:1650184/1‑150 (MQ=255)
                 gCTGGAACCAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTg                                                                                                                               >  1:1861642/1‑150 (MQ=255)
                  cTGGAACCAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGc                                                                                                                              >  1:488222/1‑150 (MQ=255)
                        ccAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTc                                                                                                                        <  2:488222/150‑1 (MQ=255)
                         cAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCACTGCCGAGTCg                                                                                                                       >  1:1098188/1‑150 (MQ=255)
                          aGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGa                                                                                                                      >  2:2097971/1‑150 (MQ=255)
                           gCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCAGGCTGGCAAGCCAGGAgacgttg                                                                                                                                         >  2:951278/1‑124 (MQ=255)
                           gCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCAGGCTGGCAAGCCAGGAgacgttg                                                                                                                                         <  1:951278/130‑7 (MQ=255)
                              gTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCtt                                                                                                                  >  1:1106415/1‑150 (MQ=255)
                               ttGGCCTCGACCAACCAGCATGCGTTGGCCGTGATCTGGTCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCCGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTc                                                                                                                 <  2:1398635/150‑1 (MQ=255)
                                   ccacGAGCAACCGCCATTCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCg                                                                                                             >  2:2401724/4‑150 (MQ=255)
                                     tCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGc                                                                                                           <  2:136277/150‑1 (MQ=255)
                                     tCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGc                                                                                                           >  1:1343112/1‑150 (MQ=255)
                                         ccaaccaGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGaaa                                                                                                       <  2:1861642/150‑1 (MQ=255)
                                         ccaaccaGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACCTCATCGCTGCCGAGTCGAGCTTCCTCGGCGaaa                                                                                                       >  1:1697261/1‑150 (MQ=255)
                                          caaccaGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAAt                                                                                                      >  1:908653/1‑150 (MQ=255)
                                            accaGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCg                                                                                                    >  1:2161010/1‑150 (MQ=255)
                                            accaGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCGTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGATCTTCCTCGGCGAAATCg                                                                                                    >  1:398827/1‑150 (MQ=255)
                                               agaattcGTTGGCGGTGGCTGAGGCAATCTATAGTGATGATAACCCGGTTTATGCGACCGGCCGCACGCTGCAGGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCGGAGTCGAGCTTCCTCGGCGAAATCGCCt                                                                                                 <  2:141415/144‑1 (MQ=255)
                                                gCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTg                                                                                                <  1:2097971/150‑1 (MQ=255)
                                                       ttGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCgg                                                                                         <  2:418174/150‑1 (MQ=255)
                                                       ttGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCgg                                                                                         <  1:2401724/150‑1 (MQ=255)
                                                       ttGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCgg                                                                                         <  1:131422/150‑1 (MQ=255)
                                                       ttGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACCTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCgg                                                                                         <  2:1697261/150‑1 (MQ=255)
                                                        tGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGTTCGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCggg                                                                                        <  1:637035/150‑1 (MQ=255)
                                                        tGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCggg                                                                                        <  2:2058019/150‑1 (MQ=255)
                                                                ggcgaggcgaTCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGc                                                                                <  2:1343112/150‑1 (MQ=255)
                                                                 gcgaggcgaTCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCg                                                                               >  2:2066397/1‑150 (MQ=255)
                                                                    aggcgaTCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGa                                                                            <  2:2124319/150‑1 (MQ=255)
                                                                      gcgaTCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTTGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGc                                                                          >  2:241154/1‑150 (MQ=255)
                                                                        gaTCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCaa                                                                        <  1:2066397/150‑1 (MQ=255)
                                                                          tCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTg                                                                                                                                                  >  2:281779/1‑74 (MQ=255)
                                                                          tCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTg                                                                                                                                                  <  1:281779/74‑1 (MQ=255)
                                                                          tCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTTGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGa                                                                      <  1:241154/150‑1 (MQ=255)
                                                                          tCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGa                                                                      <  1:1650184/150‑1 (MQ=255)
                                                                            gACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAAc                                                                    <  2:908653/150‑1 (MQ=255)
                                                                                 tGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGc                                                                                >  1:275400/1‑133 (MQ=255)
                                                                                 tGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGc                                                                                <  2:275400/133‑1 (MQ=255)
                                                                                 tGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGa                                                               >  1:2076723/1‑150 (MQ=255)
                                                                                    cGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAATGCCGATGc                                                            <  1:2054673/150‑1 (MQ=255)
                                                                                     gATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGcc                                                           >  2:2172986/1‑150 (MQ=255)
                                                                                     gATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACCCCGATGcc                                                           >  2:2037674/1‑150 (MQ=255)
                                                                                           ccGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGAc                                                     >  1:1786102/1‑150 (MQ=255)
                                                                                            cGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGTCGATCTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGAcc                                                    >  2:2133218/1‑150 (MQ=255)
                                                                                            cGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGAcc                                                    >  1:497245/1‑150 (MQ=255)
                                                                                              gTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGCTTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGTGCAAGAACGCCGATGCCGTTGActct                                                  >  2:839457/1‑150 (MQ=255)
                                                                                                    gCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGcc                                            >  2:2205941/1‑150 (MQ=255)
                                                                                                     ccACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGt                                                                                       <  2:231053/106‑1 (MQ=255)
                                                                                                     ccACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGt                                                                                       >  1:231053/1‑106 (MQ=255)
                                                                                                      cACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGa                                          >  1:2006188/1‑150 (MQ=255)
                                                                                                                        cGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGt                                                                              >  1:1651746/1‑96 (MQ=255)
                                                                                                                        cGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGt                                                                              <  2:1651746/96‑1 (MQ=255)
                                                                                                                           gttcggctcCAGGCTGGCAAGCCAGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTgcg                     >  1:678863/7‑150 (MQ=255)
                                                                                                                               gTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTg                 <  2:113972/150‑1 (MQ=255)
                                                                                                                               gTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTg                 <  2:2104322/150‑1 (MQ=255)
                                                                                                                               gTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCCTCCTCGGCGCAATCGCCTGGACCCGGGTGATGAGCGTAAGCAAGTACGCCGATGCCGTTTTCCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTg                 <  2:2080693/150‑1 (MQ=255)
                                                                                                                                gctcCAGGCTGGCAAGCCAGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTgg                >  1:1274160/2‑150 (MQ=255)
                                                                                                                                  tcCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCgg                                                                                         >  2:891151/1‑75 (MQ=255)
                                                                                                                                  tcCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCgg                                                                                         <  1:891151/75‑1 (MQ=255)
                                                                                                                                  tcCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGc                                 >  1:2140928/1‑131 (MQ=255)
                                                                                                                                  tcCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGc                                 <  2:2140928/131‑1 (MQ=255)
                                                                                                                                  tcCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGgtg              >  1:1337321/1‑150 (MQ=255)
                                                                                                                                  tcCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGgtg              >  1:1322547/1‑150 (MQ=255)
                                                                                                                                    cTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGtt            >  1:1769650/1‑150 (MQ=255)
                                                                                                                                     tGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTc           >  1:1658767/1‑150 (MQ=255)
                                                                                                                                     tGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTc           >  1:2078900/1‑150 (MQ=255)
                                                                                                                                     tGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTc           <  1:2259162/150‑1 (MQ=255)
                                                                                                                                     tGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTc           >  1:254397/1‑150 (MQ=255)
                                                                                                                                     tGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTc           <  2:1322547/150‑1 (MQ=255)
                                                                                                                                     tGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTc           <  2:1337321/150‑1 (MQ=255)
                                                                                                                                         tggcaaGCCAGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTCGAGc       <  2:1274160/145‑1 (MQ=255)
                                                                                                                                           gCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTCGAGCCg     <  2:1098188/150‑1 (MQ=255)
                                                                                                                                            ccAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTCGAGCCGa    <  1:788798/150‑1 (MQ=255)
                                                                                                                                            ccAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCAACCGTGACGCCACCAGCCTGCGCCTGGTGTTCGAGCCGa    >  2:1535090/1‑150 (MQ=255)
                                                                                                                                             cAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGGTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGc                                                            <  2:1565231/93‑1 (MQ=255)
                                                                                                                                             cAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGc                                                            >  1:1565231/1‑93 (MQ=255)
                                                                                                                                             cAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGt                                      <  2:966874/115‑1 (MQ=255)
                                                                                                                                             cAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGt                                      >  1:966874/1‑115 (MQ=255)
                                                                                                                                             cAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTCGAGCCGAt   >  1:717092/1‑150 (MQ=255)
                                                                                                                                              aGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTCGAGCCGATg  >  1:569081/1‑150 (MQ=255)
                                                                                                                                              aGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTCGAGCCGATg  >  1:744891/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
CGGTGAGTTGTCAACCCGCTGGAACCAGCCGTTGGCCTCGACCAACCAGCATGCGTTGGCCGTGGGCGAGGCGATCGACAATGACGATAACCCGGTTTATGCCACCGGCCGCACGCTGCACGCCAACGTCTCCTGGCTTGCCAGCCTGGAGCCGAACTTCATCGCTGCCGAGTCGAGCTTCCTCGGCGAAATCGCCTGGAACCGGGTGATGAGCGTGAGCAAGAACGCCGATGCCGTTGACCCTAACGCCGACCGTGACGCCACCAGCCTGCGCCTGGTGTTCGAGCCGATG  >  NC_002947/3630562‑3630853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑