| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,637,785 | A→C | 6.8% | I108L (ATC→CTC) | PP_3204 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,637,785 | 0 | A | C | 6.8% | 272.4 / 12.0 | 104 | I108L (ATC→CTC) | PP_3204 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (47/50); new base C (4/3); total (51/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.02e-02 | |||||||||||
Only 100 of 110 total aligned reads displayed.
CGACCCTGGACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGCGACATC > NC_002947/3637636‑3637934 | tgACCCTGGACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCgaga < 2:351436/149‑1 (MQ=255) ccTGGACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCgg > 2:5965/1‑150 (MQ=255) ccTGGACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGAGTGATTCGCAAACTGGACAGACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCgg > 1:293642/1‑150 (MQ=255) gACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCggcgag > 1:615146/1‑150 (MQ=255) aCAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCggcgagg < 2:2215420/150‑1 (MQ=255) cAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCggcgaggc < 2:1781408/150‑1 (MQ=255) aaCGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGATCTCggcgaagac < 1:641421/150‑5 (MQ=255) aaCGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCggcgaggcg > 1:369191/1‑150 (MQ=255) cGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGgcgaggcgag > 2:757381/1‑150 (MQ=255) ggCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGt < 1:2329171/150‑1 (MQ=255) gatgatCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGcc > 1:253663/1‑150 (MQ=255) gaagagccGAGAGCGCAGCCGCGGCAAGTGAGCCCTGGCGAGGTGGGCAGCGTAATTGGCGTGGTGGACATACCGCCCCACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGcc < 2:455893/144‑1 (MQ=255) gcgcAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCaaa < 1:937381/150‑1 (MQ=255) cgcAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAg < 1:617195/150‑1 (MQ=255) gcAGCCGCTGCAATTGAGCCCTGGCCCTCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCCTCGCCGAGATCggcga < 1:740168/126‑1 (MQ=255) gcAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGc > 1:1170478/1‑150 (MQ=255) gcAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCCTCGCCGAGATCggcga > 2:740168/1‑126 (MQ=255) cAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGcc < 2:615146/150‑1 (MQ=255) aGCCGCTGCAATGGAGCCCTGGCCCGCTGGGCAGCGTGATGCGCGTGGTGGACAGACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCg < 1:127381/150‑1 (MQ=255) aaTTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGc > 1:61174/1‑150 (MQ=255) aaTTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGc > 2:2314949/1‑150 (MQ=255) aTTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGca < 2:1411799/150‑1 (MQ=255) gAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACaa < 2:1918608/150‑1 (MQ=255) gCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGc < 2:369191/150‑1 (MQ=255) cccTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGCCGGTCTCCAGGGCTTCGCCGAGATCGGCGCGGCGACAGCCCGCACGGGCAAAGCCGATTCGAAGCACAAGCt > 1:2223271/1‑150 (MQ=255) cccTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGGGCAGAAGCAGGTCAGTGCCGAAGCTCGAATGGTGAACATCTGCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAACGCCGATTCGAAGCACAAGCt > 1:1151142/1‑150 (MQ=255) gtGGCCCGATTGTCAGGGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCGGTGCCAAAGATGAAGCCGCTGTCTTCGCCACGATCGGCGTGGCGAGAGCCGGCACGGGCAATGCCGCTTCGAAACTCAAGCTGa > 2:1737047/2‑150 (MQ=255) cGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGTTgcaca > 2:963528/1‑149 (MQ=255) gCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGaa < 2:358228/132‑1 (MQ=255) gCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGaa > 1:358228/1‑132 (MQ=255) ggCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAAGCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATgcaccgcacc < 1:751825/150‑1 (MQ=255) ggCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGc > 1:823356/1‑136 (MQ=255) ggCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGc < 2:823356/136‑1 (MQ=255) ggCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATgcaccgcacc < 1:381297/150‑1 (MQ=255) gATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCt < 1:1386596/150‑1 (MQ=255) aTTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTg > 1:1794773/1‑150 (MQ=255) aTTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTg > 1:1838264/1‑150 (MQ=255) aTTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTg > 2:1433858/1‑150 (MQ=255) gtggACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGTGACGACCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGc > 1:42927/1‑150 (MQ=255) gtggACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGc > 1:2245922/1‑150 (MQ=255) gACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATc < 2:293642/150‑1 (MQ=255) gACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGAAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCGTGGACTACGGCATc > 1:499089/1‑150 (MQ=255) aTACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCt < 1:2238846/134‑1 (MQ=255) aTACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCt > 2:2238846/1‑134 (MQ=255) tccGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTAc > 2:1008230/2‑150 (MQ=255) cGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCaaa < 1:186279/89‑1 (MQ=255) cGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCaaa > 2:186279/1‑89 (MQ=255) cGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGa < 1:1900161/133‑1 (MQ=255) cGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCg > 1:1087365/1‑150 (MQ=255) cGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTGCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGa > 2:1900161/1‑133 (MQ=255) gCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGATATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCt > 2:823956/1‑129 (MQ=255) gCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCt < 1:823956/129‑1 (MQ=255) gCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGa > 2:345410/1‑150 (MQ=255) ccGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAgg < 1:479518/150‑1 (MQ=255) aCAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCg > 1:1797089/1‑150 (MQ=255) cAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATAGGCGCGGCGAGAACCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGa < 2:1279108/150‑1 (MQ=255) aGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGGAACCCTGGACTCCGGGAGCGTTTCCGTGGGCGAg < 2:92089/150‑1 (MQ=255) tGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTct > 2:1692941/1‑150 (MQ=255) gCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctg < 1:757381/150‑1 (MQ=255) cAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctgg < 2:2245922/150‑1 (MQ=255) aaGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTCATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctgg < 1:963528/149‑1 (MQ=255) aaCCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctggctg < 2:1151142/150‑1 (MQ=255) aaCCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctggctg < 1:345410/150‑1 (MQ=255) aaCCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctggctg < 1:1008230/150‑1 (MQ=255) aCCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctggctgg < 1:521514/150‑1 (MQ=255) cAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctgg > 1:104217/1‑144 (MQ=255) cAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctgg < 2:104217/144‑1 (MQ=255) cAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTg < 2:1622615/150‑1 (MQ=255) aGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCGCGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTgg > 2:89803/1‑149 (MQ=255) ggTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCt > 2:778961/1‑150 (MQ=255) gTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACg > 1:222947/1‑150 (MQ=255) ccGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATgcac < 2:513424/86‑1 (MQ=255) ccGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATgcac > 1:513424/1‑86 (MQ=255) ccGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATg < 2:222947/150‑1 (MQ=255) ccGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATg < 1:1692941/150‑1 (MQ=255) gAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGc > 2:211144/1‑150 (MQ=255) gATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGaa < 1:211144/150‑1 (MQ=255) ccGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCCGCACGCGCAGAGCGGACTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCAcc > 1:1622860/1‑150 (MQ=255) cGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCt > 2:2312919/1‑150 (MQ=255) actcgcctCGCCGATCTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTc > 1:7723/8‑150 (MQ=255) cTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctgg < 1:415443/119‑1 (MQ=255) cTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctgg > 2:415443/1‑119 (MQ=255) tCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGa < 2:944433/103‑1 (MQ=255) tCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGa > 1:944433/1‑103 (MQ=255) gcctCGCCGATCTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGa > 1:972247/4‑109 (MQ=255) gcctCGCCGATCTCGGCGAGGCGAGTGCCGGCACAGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAGCCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAAc > 1:1996536/4‑150 (MQ=255) ttCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGa > 1:2197693/1‑150 (MQ=255) ctCGCCGATCTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGa < 1:906365/100‑1 (MQ=255) ctCGCCGATCTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGa > 2:906365/2‑101 (MQ=255) tCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAg < 1:1350084/150‑1 (MQ=255) gCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGc < 1:2314949/150‑1 (MQ=255) ccGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGCg > 2:2366344/1‑150 (MQ=255) ccGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGCg > 2:2364627/1‑150 (MQ=255) cGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATgg > 1:2214747/1‑126 (MQ=255) cGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATgg < 2:2214747/126‑1 (MQ=255) gagaTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGCTTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGCCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGCGAc > 1:1945898/1‑150 (MQ=255) gaTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGCGACAt > 1:976516/1‑150 (MQ=255) aTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATgg < 1:1388980/122‑1 (MQ=255) aTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATgg > 2:1388980/1‑122 (MQ=255) aTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGCGACATc > 1:1500104/1‑150 (MQ=255) | CGACCCTGGACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGCGACATC > NC_002947/3637636‑3637934 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |