| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,645,945 | A→T | 5.6% | L32Q (CTG→CAG) | PP_3212 ← | Rieske 2Fe‑2S family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,645,945 | 0 | A | T | 5.6% | 348.8 / 8.8 | 108 | L32Q (CTG→CAG) | PP_3212 | Rieske 2Fe‑2S family protein |
| Reads supporting (aligned to +/- strand): ref base A (50/52); new base T (3/3); total (53/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.32e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
AGTCGTATTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCTGCCGACC > NC_002947/3645796‑3646093 | aGTCGTATTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCca < 1:1485435/150‑1 (MQ=255)aGTCGTATTCCCAGCCGTGATACCCGCAGGCGATATGGCCCTCAGCACTGACGAAGCCTTTGGACAGGGTGCCGGTGCGGTGCCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAAAACGAGCGCTTCACCca > 1:1977036/1‑150 (MQ=255) tCGTATTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCcagc > 1:1830692/1‑150 (MQ=255) cGTATGCCCAGCCGTGATCCCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGACTTCCCAACGGTGTACCATCGCTACGCTGCCACAACACCAGCGCTTCACCcagca < 2:26784/150‑1 (MQ=255) tATTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCTGCTgg < 2:1088650/150‑1 (MQ=255) tATTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAgg < 1:95854/150‑1 (MQ=255) tATTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAgg < 1:177579/150‑1 (MQ=255) aTTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGAACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAggg > 2:2082533/1‑150 (MQ=255) ccAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGaa > 1:403538/1‑150 (MQ=255) ccAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGaa > 2:584612/1‑150 (MQ=255) tGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTg < 2:1850396/150‑1 (MQ=255) tGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTg < 2:837683/150‑1 (MQ=255) aTACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTggg < 2:182498/150‑1 (MQ=255) aTACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTggg > 1:434136/1‑150 (MQ=255) tACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTgggg < 2:403538/150‑1 (MQ=255) cccGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGcc < 2:2149169/150‑1 (MQ=255) cGATATTGCCCTCAGCACTGACGAAGCACCTGGACCATCTGGCTGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGa < 2:804241/150‑1 (MQ=255) ttGCCCTCAGCACTGACGAAGCCTTTGGACTGTTTGGCGGTGCGGCGACAGCAGCGGTCCCGCATTCCCACCCGGGTACCCTCGGGACCCTTCCACAACACCAGCGCTTGACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCt < 2:131146/150‑1 (MQ=255) ttGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCt > 2:2025647/1‑150 (MQ=255) ttGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCt < 1:354880/150‑1 (MQ=255) tCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATa > 1:849609/1‑150 (MQ=255) aGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAgg < 2:857878/150‑1 (MQ=255) aGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAgg < 1:1427977/150‑1 (MQ=255) cACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGt < 1:359362/112‑1 (MQ=255) cACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGt > 2:359362/1‑112 (MQ=255) tGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTggg < 2:255570/121‑1 (MQ=255) tGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTggg > 1:255570/1‑121 (MQ=255) tGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCa > 1:1510768/1‑150 (MQ=255) aCGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGATGAATGGCTTGGGGCCGTCTTCTAGGGCTGTCATAGGGAGCacg > 2:768203/1‑148 (MQ=255) gAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGc > 1:1263068/1‑150 (MQ=255) gAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGc > 2:105388/1‑150 (MQ=255) cTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAg < 1:2181315/124‑1 (MQ=255) cTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAg > 2:2181315/1‑124 (MQ=255) tttGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCa < 1:1760548/150‑1 (MQ=255) tttGGACAGTTTGGCGCTGCGGCGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGCGACGCTTCCACAACACCAGCGTTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCa < 1:10780/150‑1 (MQ=255) gACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGaaa > 1:1573767/1‑150 (MQ=255) tttGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGgcg > 1:2153182/1‑150 (MQ=255) ggCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCaa < 2:1689491/150‑1 (MQ=255) tgcggtgGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAg < 1:2025647/150‑1 (MQ=255) tgcggtgGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAg < 2:499594/150‑1 (MQ=255) tgcggtgGCAGCAGCGGTCCCGCATTGCCACCGCGGCCGCGGCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAg < 1:126592/150‑1 (MQ=255) cggtgGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGgt < 1:584612/150‑1 (MQ=255) gtgGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCt < 2:1474757/106‑1 (MQ=255) gtgGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCt > 1:1474757/1‑106 (MQ=255) gcagcaGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGttt < 2:1573767/150‑1 (MQ=255) cagcagCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTg > 1:1800419/1‑150 (MQ=255) agcagcGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTgg > 2:1661830/1‑150 (MQ=255) gcagcGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGt > 2:732548/1‑150 (MQ=255) gcGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAAc < 2:1830692/150‑1 (MQ=255) tCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAAc > 2:811811/1‑150 (MQ=255) cccGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAg < 2:924594/106‑1 (MQ=255) ccGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAAAAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACAt > 1:263726/1‑150 (MQ=255) cGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACg > 2:2399199/1‑119 (MQ=255) cGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACg < 1:2399199/119‑1 (MQ=255) gCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATaa > 2:116874/1‑150 (MQ=255) cATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGt > 1:1357877/1‑138 (MQ=255) cATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGt < 2:1357877/138‑1 (MQ=255) ccACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGa < 1:435708/150‑1 (MQ=255) ccACCGGGGTACCATCGGGACGAAACCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGa > 1:933449/1‑150 (MQ=255) aCCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCa < 1:30849/145‑1 (MQ=255) aCCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCa > 2:30849/1‑145 (MQ=255) gTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTcac > 1:763278/1‑150 (MQ=255) tACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTcaca < 1:811811/150‑1 (MQ=255) aTCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGt > 1:1743659/1‑150 (MQ=255) gACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCa > 2:1405304/1‑88 (MQ=255) gACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCa < 1:1405304/88‑1 (MQ=255) gCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAAcc < 2:580520/116‑1 (MQ=255) gCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAAcc > 1:580520/1‑116 (MQ=255) cTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGt < 2:347669/150‑1 (MQ=255) ttCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCt > 1:60577/1‑60 (MQ=255) ttCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCt < 2:60577/60‑1 (MQ=255) ttCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGtt > 2:1747017/1‑150 (MQ=255) cacaACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATg < 2:1977036/150‑1 (MQ=255) cacaACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGGCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAAACAACATAATCAGGATTCCTCACAACGTTGAGCTTGTTAtt > 2:1084844/1‑149 (MQ=255) acaacaCCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAgg < 2:942288/71‑1 (MQ=255) acaacaCCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAgg > 1:942288/1‑71 (MQ=255) acaacaCCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATgg > 1:1347709/1‑150 (MQ=255) caacaCCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTcaca < 2:102920/131‑1 (MQ=255) caacaCCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTcaca > 1:102920/1‑131 (MQ=255) acacCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGgtgt < 1:1159289/150‑1 (MQ=255) acacCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGgtgt > 2:1690804/1‑150 (MQ=255) cacCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGTCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTTAGCGGATTATGGTGtt > 1:498271/1‑150 (MQ=255) acCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCa < 2:423678/64‑1 (MQ=255) acCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCa > 1:423678/1‑64 (MQ=255) cAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAg < 2:1263068/150‑1 (MQ=255) accgcTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTTCTCCCTATCTCTCATTGGGTGTAGGTCATACCAAACATCACGCAATACATGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGc < 1:542137/148‑1 (MQ=255) aGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGgtgt > 2:223715/1‑145 (MQ=255) aGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGgtgt < 1:223715/145‑1 (MQ=255) cattCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGgt > 1:690709/3‑140 (MQ=255) cattCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGgt < 2:690709/138‑1 (MQ=255) cTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGGATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCt < 2:933449/150‑1 (MQ=255) cTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCt < 2:1743659/150‑1 (MQ=255) attCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGttt > 1:1287823/2‑91 (MQ=255) attCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGttt < 2:1287823/90‑1 (MQ=255) attCACCCTGCTGGGAGAATGGCTTGGGGCCGTCTTCGCAAACACAGATTGTGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCGCACATCGTTTAGCTTGTTATGGGGTGCGGCGGCt > 2:944343/2‑150 (MQ=255) ttCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGgt < 1:1596361/85‑1 (MQ=255) ttCACCCAGCAGGGTCAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGa < 1:1934960/126‑1 (MQ=255) aCCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCTGCCg > 1:455850/1‑150 (MQ=255) cccAGCAGGGCGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCTGCCGa > 2:314640/1‑150 (MQ=255) cagcagGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCTGCCGAcc > 1:1788202/1‑150 (MQ=255) | AGTCGTATTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCTGCCGACC > NC_002947/3645796‑3646093 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |