| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 334,605 | A→T | 11.3% | L28* (TTG→TAG) ‡ | PP_0276 ← | Cro/CI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 334,605 | 0 | A | T | 11.3% | 219.0 / 13.9 | 78 | L28* (TTG→TAG) ‡ | PP_0276 | Cro/CI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (38/31); new base T (5/4); total (43/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
CCAGCATGTCCATCATGGCGTCCAAGGTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAA > NC_002947/334456‑334754 | ccAGCATGTCCATCATGGCGTCCAAGGTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCCTCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACa < 1:1543467/150‑1 (MQ=255) gCATGTCCATCATGGCGTCCAAGGTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGt > 2:1499520/1‑150 (MQ=255) gCATGTCCATCATGGCGTCCAAGGTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGAAAAGt > 1:447322/1‑150 (MQ=255) gTCCATCATGGCGTCCAAGGTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCAt > 1:1912175/1‑150 (MQ=255) tCCATCATGGCGTCCAAGGTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGATGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCAtt < 1:1499520/150‑1 (MQ=255) atcatGGCGTCCAAGGTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGGGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTc > 1:227920/1‑150 (MQ=255) catGGCGTCCAAGGTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCaa < 1:1388825/150‑1 (MQ=255) atGGCGTCCAAGGTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAg < 1:1462249/150‑1 (MQ=255) tGGCGTCCAAGGTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCACATGGT‑AAAATGGACAAGTCCATTTTCAAgg < 1:1643921/150‑1 (MQ=255) aGGTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGTCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGc < 2:42990/150‑1 (MQ=255) ggTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCt > 2:2127059/1‑150 (MQ=255) tGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACTTGTCCAttt > 2:441001/1‑132 (MQ=255) tGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACTTGTCCAttt < 1:441001/132‑1 (MQ=255) gAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGc > 1:668785/1‑150 (MQ=255) ctcGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGTCATTTTTCTGGCGGTAtt > 2:972126/1‑149 (MQ=255) ctcGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATc > 2:142101/1‑150 (MQ=255) ctcGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATc > 2:1532864/1‑150 (MQ=255) cATTTGCAAGCTCGGATAGGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCgtggg > 1:2012139/1‑150 (MQ=255) aTTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCgtgggt > 1:870060/1‑150 (MQ=255) tttGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCgtgggtg < 1:1532864/150‑1 (MQ=255) cAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCTTCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTTCTGGCGGTATCTGCGTCGTGGGTGGCGt > 2:1825339/1‑150 (MQ=255) cAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGt > 1:1648451/1‑150 (MQ=255) aaGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACTTGTCCAttt > 1:1624465/1‑107 (MQ=255) aaGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACTTGTCCAttt < 2:1624465/107‑1 (MQ=255) aaGCTCGGATATGAGGGATTGGGTTACGTTCAGTTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGTAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTg < 1:1148722/150‑1 (MQ=255) gCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGa > 1:999858/1‑150 (MQ=255) tCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTTGTGCGTGGCGTGGaaa < 2:227920/150‑1 (MQ=255) tCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTAAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGaaa > 1:1717982/1‑150 (MQ=255) cGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAg < 2:1912175/150‑1 (MQ=255) ggATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAga < 2:1648451/150‑2 (MQ=255) gggATTGGGTTACGTTCAGCTTGGCTGCGGCTTCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTTCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGt < 1:1825339/150‑1 (MQ=255) gTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCTTCGTGGTTTGCGTGGAAAGGGCTTTCGTGGTATTGa > 2:339793/1‑150 (MQ=255) gTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCA‑TTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGaaa < 1:267085/131‑1 (MQ=255) gTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCA‑TTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGaaa > 2:267085/1‑131 (MQ=255) ttACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGaa > 1:2250861/1‑150 (MQ=255) aCGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAgc < 2:2250861/150‑1 (MQ=255) tCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCa < 1:2127059/150‑1 (MQ=255) gCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCt < 2:314708/101‑1 (MQ=255) gCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCt > 1:314708/1‑101 (MQ=255) gCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAgc < 1:1178883/143‑1 (MQ=255) gCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAgc > 2:1178883/1‑143 (MQ=255) cTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACaa < 2:1063128/66‑1 (MQ=255) cTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACaa > 1:1063128/1‑66 (MQ=255) cTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCgg < 2:668785/150‑1 (MQ=255) ttGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGc > 1:5156/1‑150 (MQ=255) ttGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGAAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGc > 2:33059/1‑150 (MQ=255) tGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGaaa > 2:2127516/1‑150 (MQ=255) gCTGTTTGAGGCCCATTTTTTTGATGCATTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTTTCGGTATCTGCGTCGTGGGTGGCTTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCTGCTTGCCTCGGCAGaact > 2:180546/1‑148 (MQ=255) gCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCt > 1:887762/1‑73 (MQ=255) gCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCt < 2:887762/73‑1 (MQ=255) cccATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAggg < 2:76157/96‑1 (MQ=255) cccATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAggg > 1:76157/1‑96 (MQ=255) ccATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAGAATTTg > 1:1176728/1‑150 (MQ=255) ccATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTg < 2:447322/150‑1 (MQ=255) cATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATATAAAATTTGc > 1:115433/1‑150 (MQ=255) tgttgttGATGCAGTCA‑GTGATGAAAATGGAAAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGa < 2:395662/145‑1 (MQ=255) ttGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTGTCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATGGAAGCGCCATCGGGTTGCCGCGGCAGAAATAGCTGAAATTTGCGATAAAt > 2:177570/1‑150 (MQ=255) gATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGc < 1:2308064/63‑1 (MQ=255) gATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCg > 1:1294611/1‑150 (MQ=255) gATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGAGGTATATGc > 2:2308064/1‑63 (MQ=255) tca‑gtGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGGGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCAt > 1:1499892/1‑101 (MQ=255) tca‑gtGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCAt < 2:1499892/101‑1 (MQ=255) gtGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGAt < 1:33059/150‑1 (MQ=255) ggatgaAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGAtt > 1:117631/2‑150 (MQ=255) cttgaAAATGGACTTGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGaaa > 1:2227357/3‑70 (MQ=37) cttgaAAATGGACTTGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGaaa < 2:2227357/68‑1 (MQ=37) cttgaAAATGGACTTGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCgg < 2:1442108/107‑1 (MQ=255) cttgaAAATGGACTTGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCgg > 1:1442108/3‑109 (MQ=255) cttgaAAATGGACAAGTCCATTTTCAAGGCCGTTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGa > 2:2211763/3‑131 (MQ=255) cttgaAAATGGACAAGTCCATTTTCAAGGCCGTTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGa < 1:2211763/129‑1 (MQ=255) atgaAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGAttgg < 1:142101/150‑1 (MQ=255) tgaAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGAttggt > 2:394620/1‑150 (MQ=255) tgaAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGAttg > 1:1629590/1‑148 (MQ=255) tgaAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGAttg < 2:1629590/148‑1 (MQ=255) aaaaTGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGAttggttg < 2:117631/150‑1 (MQ=255) aaaTGGACTTGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGAttggttgg > 1:116992/1‑150 (MQ=255) aaaTGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGAttggttgg > 2:843148/1‑150 (MQ=255) tgtaCAAGTCCATTTTCAAGGCCATTTTGTTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGa < 2:999858/147‑1 (MQ=255) tGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGAAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGa < 1:972126/150‑1 (MQ=255) gACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGt < 2:1294611/150‑1 (MQ=255) aCAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTc > 1:1057326/1‑150 (MQ=255) aaGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCaa > 2:46192/1‑150 (MQ=255) | CCAGCATGTCCATCATGGCGTCCAAGGTGAATTTCTCGATCTTGCCATTTGCAAGCTCGGATATGCGGGATTGGGTTACGTTCAGCTTGGCTGCGGCATCATGCTGTTTGAGGCCCATTTTTTTGATGCAGTCA‑GTGATGAAAATGGACAAGTCCATTTTCAAGGCCATTTTGCTGGCGGTATCTGCGTCGTGGGTGGCGTGGAAAGGGCTTTCGTGGAATTGAAGCGCCATCGGCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAA > NC_002947/334456‑334754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |