| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,731,889 | A→G | 5.8% | R465R (CGT→CGC) | PP_3299 ← | lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,731,889 | 0 | A | G | 5.8% | 265.4 / 4.3 | 88 | R465R (CGT→CGC) | PP_3299 | lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (45/37); new base G (3/2); total (48/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.67e-01 | |||||||||||
ACTTGGATTACGCGGTATGAGCCCAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACGAACGTCGTGCTCGCTCCAGGGATACCTCACCG > NC_002947/3731742‑3732036 | aCTTGGATTACGCGGTATGAGCCCAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCAcg > 2:1205183/1‑150 (MQ=255) ttGGATTACGCGGTATGAGCCCAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCAcgcg > 2:1820619/1‑150 (MQ=255) gATTACGCGGTATGAGCCCAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCgctg > 2:121070/1‑150 (MQ=255) ttACGCGGTATGAGCCCAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCgctgct > 1:2315870/1‑150 (MQ=255) cgcgGTATGAGCCCAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCGCGTgctgctatt < 1:2336651/150‑4 (MQ=255) gcgGTATGAGCCCAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAg > 2:2229360/1‑150 (MQ=255) tATGAGCCCAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTg < 1:121070/150‑1 (MQ=255) aTGAGCCCAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTAACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTgc < 1:350375/150‑1 (MQ=255) aTGAGCCCAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGCCCTCTTTGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTgc < 1:149975/150‑1 (MQ=255) cccAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCTCAAc > 1:2210591/1‑150 (MQ=255) cccAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAAc < 2:2195261/150‑1 (MQ=255) aaTCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGt < 2:2235057/138‑1 (MQ=255) aaTCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGt > 1:2235057/1‑138 (MQ=255) ccTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCg > 1:1053683/1‑150 (MQ=255) ccTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCg > 1:373966/1‑150 (MQ=255) tCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCa > 2:971615/1‑131 (MQ=255) tCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCa < 1:971615/131‑1 (MQ=255) gAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCTCAACTGCTCGGAAATcc < 2:2210591/150‑1 (MQ=255) aGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGa < 2:181496/150‑1 (MQ=255) tACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTg > 1:2045477/1‑150 (MQ=255) tACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAAATACAAGACGGGGTGCTTTAGTTTTGGCAACTTCCTGGAAATCCGGTGTCCtt > 1:1282388/1‑149 (MQ=255) cttctGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAg < 1:659187/150‑1 (MQ=255) tGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAgctgc < 2:2315870/150‑1 (MQ=255) gCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTc > 2:1648672/1‑123 (MQ=255) gCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTc < 1:1648672/123‑1 (MQ=255) cAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATc < 2:928455/150‑1 (MQ=255) ttttACGCAGCCCCATCATCGCTGGGCCAAACCTGAGTCAGTTGCCCACCGGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGtt < 2:1282388/149‑1 (MQ=255) aTTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGtt < 2:1053683/150‑1 (MQ=255) aTTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGtt > 2:1518467/1‑150 (MQ=255) aCGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGa < 1:1820619/150‑1 (MQ=255) cGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGaa < 1:1205183/150‑1 (MQ=255) gCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCGCGTgctgctat > 1:82990/1‑88 (MQ=255) gCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCGCGTgctgctat < 2:82990/90‑3 (MQ=255) aGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGt < 2:1362889/150‑1 (MQ=255) ccATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCt > 2:388630/1‑117 (MQ=255) ccATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCt < 1:388630/117‑1 (MQ=255) ccATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTAt > 1:1867179/1‑150 (MQ=255) catcatCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATc < 1:2229360/150‑1 (MQ=255) atcatcGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCa > 2:2037890/1‑150 (MQ=255) atcatcGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCa > 2:2037960/1‑150 (MQ=255) cTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACCGGc < 2:2253220/150‑1 (MQ=255) tgtgCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACt > 2:1988051/1‑146 (MQ=255) tgtgCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACt < 1:1988051/146‑1 (MQ=255) gtgCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTga < 1:1307504/108‑1 (MQ=255) gtgCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTga > 2:1307504/1‑108 (MQ=255) ccACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCa > 2:1791497/1‑71 (MQ=255) ccACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCa < 1:1791497/71‑1 (MQ=255) ccACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGc < 1:2195976/145‑1 (MQ=255) ccACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGc > 2:2195976/1‑145 (MQ=255) ccACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTacac > 2:2043368/1‑150 (MQ=255) acaTCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCg > 2:630122/1‑150 (MQ=255) acaTCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCg > 2:2271275/1‑150 (MQ=255) aTCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGtt > 1:85408/1‑150 (MQ=255) aTCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTACTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACAGCGtt > 1:534538/1‑150 (MQ=255) tCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGCTCTGCGTTCAGAACGTCTATCAAACTTGCTACACCGTTc < 2:799361/150‑1 (MQ=255) tCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTc > 1:816679/1‑150 (MQ=255) cTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCg > 1:1850848/1‑82 (MQ=255) cTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCg < 2:1850848/82‑1 (MQ=255) tGAGTCAGTTGACCACCCGCCGCCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTg < 2:2045477/150‑1 (MQ=255) tGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTg < 2:1867179/150‑1 (MQ=255) gTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGaa < 1:2271275/150‑1 (MQ=255) tCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTc > 2:2151942/1‑122 (MQ=255) tCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTc < 1:2151942/122‑1 (MQ=255) cAGTTGACTACCCTCCACCCAGGGCGCGGTAGGCAGCACTAGCGGTACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGCTGTCCTGAGACGCTGCTGATTTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATg < 1:1121964/150‑1 (MQ=255) gTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGtt < 1:1420671/110‑1 (MQ=255) gTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGtt > 2:1420671/1‑110 (MQ=255) gACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCCGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACg > 1:2302202/1‑150 (MQ=255) ccaccCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGaa > 1:1551682/1‑150 (MQ=255) caccCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGc < 2:117430/101‑1 (MQ=255) caccCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGc > 1:117430/1‑101 (MQ=255) caccCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAg > 2:718861/1‑150 (MQ=255) caccCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAg > 1:1472090/1‑150 (MQ=255) acacGCCACCCAGGGCGAGGTAGGCAGCAATAGAAGAACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCTATGTCTTGAACAGCTGGTGATCTGCGTTCAGAACGTCGATCAAACGGGCGACACCGTTCTGGAATTCGACGAAgg > 2:190836/4‑150 (MQ=255) ccGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGAc > 1:1917944/1‑150 (MQ=255) ccGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGAc > 2:2258787/1‑150 (MQ=255) cGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACg > 1:828791/1‑150 (MQ=255) cAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACGAAcgtcg < 2:828791/150‑1 (MQ=255) gggCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACGAACGTCGTg > 1:879480/1‑150 (MQ=255) aGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACGAACGTCGTgctcgc > 1:1462907/1‑150 (MQ=255) tAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACGAACGTCGTGCTCGCTcc > 2:917895/1‑150 (MQ=255) gcggcaATAGCGGCTCGCGCTGCTTCAGTTTGTGCAACTGCTCGGAAATCCGATGTTCTGAGAAGCTGCTCATCTTCGTTCAGTACGTCTATAAACCTGGCTCCACCGTTCTGTAATGCTACGAAGGACGAATGTCGTTCTCGCTCCAgg < 2:624189/147‑1 (MQ=255) gcagcaATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACGAACGTCGTGCTCGCTCCAgg < 1:718861/150‑1 (MQ=255) tggagcagcGCGTGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACGAACGTCGTGCTCGCTCCAGGGATAc > 1:2404444/4‑150 (MQ=255) aaTAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACGAAcgtc > 1:499509/1‑131 (MQ=255) aaTAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACGAAcgtc < 2:499509/131‑1 (MQ=255) gaagcagcGCGTGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACGAACGTCGTGCTCGCTCCAGGGATAcc > 2:2350518/3‑150 (MQ=255) tAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTg < 2:609920/106‑1 (MQ=255) tAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTg > 1:609920/1‑106 (MQ=255) gcaCGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACt < 2:69779/86‑1 (MQ=255) gcaCGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACt > 1:69779/1‑86 (MQ=255) gcaCGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACGAACGTCGTGCTCGCTCCAGGGATACCTCACcg > 1:55918/1‑150 (MQ=255) | ACTTGGATTACGCGGTATGAGCCCAATCCTCAACGAAGGTGAGTACGTCTTCTGCACCAAGGCATTTACGCAGTCCCATCATCGCTGTGCCACATCTGAGTCAGTTGACCACCCGCCACCCAGGGCGAGGTAGGCAGCAATAGCAGCACGCGCTGCTTCAGTTTGCGCAACTGCTCGGAAATCCGATGTCCTGAGAAGCTGCTGATCTGCGTTCAGAACGTCTATCAAACTGGCTACACCGTTCTGGAATGCTACGAAGGACGAACGTCGTGCTCGCTCCAGGGATACCTCACCG > NC_002947/3731742‑3732036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |