| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,774,386 | C→T | 6.7% | intergenic (+38/+28) | PP_5743 → / ← PP_3335 | TonB‑dependent receptor protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,774,386 | 0 | C | T | 6.7% | 306.2 / 9.6 | 105 | intergenic (+38/+28) | PP_5743/PP_3335 | TonB‑dependent receptor protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (51/47); new base T (4/3); total (55/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.44e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
GAAACGCTGGCCGTGGTGGTGTCCAGGTATTCGGCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTGGGGCGTGAACGGGGT > NC_002947/3774239‑3774533 | gAAACGCTGGCCGGGGTGGGGTCCAGGTATTCGGCCGCACCAGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGAcggcgg < 2:79189/150‑1 (MQ=255) aCGCTGGCCGTGGTGGTGTCCAGGTATTCGGCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTGACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGcggccg > 2:1739829/1‑150 (MQ=255) gCTGGCCGTGGTGGTGTACAGGTATTCGGCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCGTGTTGGAGCTTGGGCGAAGGGTGCAAGGAAGGagaccggg > 1:408324/1‑149 (MQ=255) gCCGTGGTGGTGTCCAGGTATTCGGCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCAcc > 2:372601/1‑150 (MQ=255) cGTGGTGGTGTCCAGGTATTCGGCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGt > 2:1431486/1‑150 (MQ=255) ggtggtgTCCAGGTATTCGGCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCaa < 2:1929314/150‑1 (MQ=255) gtggtgTCCAGGTATTCGGCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATACATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGTCCGGCCACCGTCAAc > 2:458006/1‑150 (MQ=255) tggtgTCCAGGTATTCGGCCGCACCCGGCAGGCTGCCAGCCTGAACCACGCAGTTGGACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACt > 2:865537/1‑150 (MQ=255) tCCAGGTATTCGGCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCa > 1:1924867/1‑150 (MQ=255) aGGTATTCGGCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCTGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATgg < 1:926253/150‑1 (MQ=255) aGGTATTCGGCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCGAGGACGGCGGCCGGCCACCGTCAACTGATCATgg < 2:450639/150‑1 (MQ=255) gTATTCGGCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGtt > 2:1017658/1‑150 (MQ=255) gCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCgg < 1:1125880/150‑1 (MQ=255) gttCAGGCTGGCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCaa > 2:536619/3‑123 (MQ=255) gttCAGGCTGGCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCaa < 1:536619/121‑1 (MQ=255) gTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGca > 1:2073124/1‑150 (MQ=255) tCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGcag > 2:891342/1‑150 (MQ=255) ggCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGcagcca < 1:396915/150‑1 (MQ=255) cTGCCAGCCTGAACCACGCAGTGGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGcagccagc < 1:946158/150‑1 (MQ=255) ccAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGcc > 2:41905/1‑150 (MQ=255) cAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGTGGCCGGCCGCCGTcctt > 1:1724566/1‑110 (MQ=255) cAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGTGGCCGGCCGCCGTcctt < 2:1724566/113‑4 (MQ=255) cTGAACCACGCAGTTGGACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAg < 1:865537/150‑1 (MQ=255) cTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAg < 1:372601/150‑1 (MQ=255) cTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGAACGGCGGCTGGCCACCGTCAACTGATTATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAg < 1:473742/150‑1 (MQ=255) gAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCt > 1:2191779/1‑150 (MQ=255) cACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGTTAACCTCATGTTGGCGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTAccc > 1:267892/1‑150 (MQ=255) cACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGc > 1:1177225/1‑145 (MQ=255) cACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGc < 2:1177225/145‑1 (MQ=255) cACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTAccc > 1:341132/1‑150 (MQ=255) aCGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCcg > 2:133719/1‑150 (MQ=255) gCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCcgcg > 1:2296161/1‑150 (MQ=255) aGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGcc > 1:202077/1‑150 (MQ=255) ttGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCtt < 1:1169320/150‑1 (MQ=255) tGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCttt < 2:202077/150‑1 (MQ=255) tGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCttt < 1:41905/150‑1 (MQ=255) aaCGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATgg < 2:1809691/102‑1 (MQ=255) aaCGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATgg > 1:1809691/1‑102 (MQ=255) gcgcATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAg > 2:2174294/1‑129 (MQ=255) gcATGGTTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAg > 1:1328292/1‑150 (MQ=255) gcATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTc > 2:389293/1‑83 (MQ=255) gcATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTc < 1:389293/83‑1 (MQ=255) tGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGTAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCgg > 1:948490/1‑150 (MQ=255) ggCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCggg < 2:2296161/150‑1 (MQ=255) ttGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCgg < 1:849398/97‑1 (MQ=255) ttGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCgg > 2:849398/1‑97 (MQ=255) gAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTAc > 1:1090834/1‑122 (MQ=255) gAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTAc < 2:1090834/122‑1 (MQ=255) aaGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAg < 1:1431486/150‑1 (MQ=255) gTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAgcgc < 2:239618/109‑1 (MQ=255) gTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAgcgc > 1:239618/1‑109 (MQ=255) tACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGgag < 1:2305745/150‑1 (MQ=255) aCATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGgaga < 2:1924867/150‑1 (MQ=255) atccatcGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAAc < 2:2182556/70‑1 (MQ=255) atccatcGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAAc > 1:2182556/1‑70 (MQ=255) atccatcGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAAc > 2:2343211/1‑150 (MQ=255) atccatcGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAAc > 1:2106404/1‑150 (MQ=255) atcGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTAGCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTccc > 1:22330/1‑150 (MQ=255) atcGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTccc > 1:1545496/1‑150 (MQ=255) atcGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTccc > 2:1344900/1‑150 (MQ=255) tcgtcgGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCa > 2:1680942/1‑150 (MQ=255) tcgtcgGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCa > 1:798761/1‑150 (MQ=255) tcgtcgGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCa < 2:798761/150‑1 (MQ=255) tcgtcgGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCa < 1:2068931/150‑1 (MQ=255) cgtcgGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAg < 1:1017658/150‑1 (MQ=255) aaCCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACggtg < 2:1814863/150‑1 (MQ=255) ccccATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATc > 1:2401271/4‑60 (MQ=255) ccTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGGCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGGCTTTGCAATCGAGCGGCCTCCACGAGAACTCCCCGGACggttgt < 2:642992/150‑1 (MQ=255) ccTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATc < 2:2401271/60‑1 (MQ=255) cTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGTCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGTGACCGGCAGAACCTGATGG‑‑AAGCGACTCCCTCCGGAGCCATCGAGCGGGCTCCAGGAGAACTCACAGGCCGgtggtg > 1:284931/1‑150 (MQ=255) cTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATg < 2:64955/62‑1 (MQ=255) cTCATGTTGGAGCTTGGGCAAAGGGTGAAAGGACGGCGGCCGGCCACCGTCAACTGATCATg > 1:64955/1‑62 (MQ=255) tCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGtggtgg > 1:1815159/1‑150 (MQ=255) tCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGtggtgg > 1:2294070/1‑150 (MQ=255) aGCTTGGGCAAAGGGTGCAATCACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGccctc < 1:917751/150‑1 (MQ=255) gCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGccctcc < 2:1815159/150‑1 (MQ=255) gCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGccctcc < 2:1328292/150‑1 (MQ=255) ttGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGccctcccc > 1:1639164/1‑150 (MQ=255) ggCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGccctccccctc > 1:1737745/1‑150 (MQ=255) gCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGa > 1:1176579/1‑125 (MQ=255) gCAAAGGGTGCAAGGACGGCGGCCGGCCACAGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGCGGCAAGccctccccctcc > 2:125960/1‑150 (MQ=255) aaaGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTg > 2:808753/1‑150 (MQ=255) aaaCGGGGCAAGGACGGCGACCGGCCACCGTCAACTGATCATGGATTAGCCGGGCACCGGCAGCCAGCGCCGG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCACGACGGTGGTGGCAAGCCCTCCCCCTCCTg > 2:601466/1‑150 (MQ=255) ggggTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTggg < 2:1540262/149‑1 (MQ=255) aGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGCTCCTGGTATAG‑GGCTAAGCGCCTGATAG‑GCATGGCGAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTggg < 1:891342/150‑1 (MQ=255) aGGGTGCAAGGACGGCGCCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGATAACTCCCAGGACGGTGGTGGCAAGCCCTCCCACTCCTggg < 2:408324/150‑1 (MQ=255) gggTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTgggg > 2:1689918/1‑150 (MQ=255) ggTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGc > 2:680494/1‑96 (MQ=255) ggTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTGGGGc > 1:1029907/1‑150 (MQ=255) ggTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTGGGGc < 1:1334960/150‑1 (MQ=255) tGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTGGGGCGt < 1:458006/150‑1 (MQ=255) aaGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTGGGGCGTGaa > 1:2344448/1‑150 (MQ=255) ttgACGGTGGCCGGCCGCCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACggtggt < 2:1843195/118‑1 (MQ=255) ttgACGGTGGCCGGCCGCCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACggtggt > 1:1843195/3‑120 (MQ=255) ggACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTGGGGCGTGAACg > 2:1247412/1‑150 (MQ=255) gACGGTGGCCGGCCGCCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTgg < 2:1560380/139‑1 (MQ=255) gACGGTGGCCGGCCGCCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTACCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTGGGGCGTGAAcag > 1:610719/1‑148 (MQ=255) gACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTGGGGCGTGAACgg < 1:133719/150‑1 (MQ=255) aCGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTGGGGCGTGAACggg < 2:2294070/150‑1 (MQ=255) ggcggcCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTGGGGCGTGAACGGGGt > 2:1116210/1‑150 (MQ=255) | GAAACGCTGGCCGTGGTGGTGTCCAGGTATTCGGCCGCACCCGTCAGGCTGCCAGCCTGAACCACGCAGTTGAACGCGCGCATGGCTTGAAGTACATCCATCGTCGGTAACCTCATGTTGGAGCTTGGGCAAAGGGTGCAAGGACGGCGGCCGGCCACCGTCAACTGATCATGGTTTAGCCGGGCACCGGCAGCCAGCGCCTG‑‑AAGCTACCCGCGCCTTTGCCATCGAGCGGGCTCCAGGAGAACTCCCAGGACGGTGGTGGCAAGCCCTCCCCCTCCTGGGGCGTGAACGGGGT > NC_002947/3774239‑3774533 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |