Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,791,453 C→G 6.4% A285G (GCC→GGC)  PP_3353 → sulfatase‑modifying protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,791,4530CG 6.4% 291.3 / 9.2 94A285G (GCC→GGC) PP_3353sulfatase‑modifying protein
Reads supporting (aligned to +/- strand):  ref base C (39/49);  new base G (4/2);  total (43/51)
Fisher's exact test for biased strand distribution p-value = 4.07e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.22e-01

Only 100 of 104 total aligned reads displayed.

TTTTACCGGTACATCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATGACGACCTCGCACGTGG  >  NC_002947/3791304‑3791602
                                                                                                                                                     |                                                                                                                                                     
ttttACCGGTAGATCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAggcccggc                                                                                                                                                       >  2:1297397/1‑150 (MQ=255)
ttttACCGGTACATCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAggcccggc                                                                                                                                                       >  1:370946/1‑150 (MQ=255)
  ttACCGGTACATCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAggcccggccc                                                                                                                                                     <  2:1411261/150‑1 (MQ=255)
     ccGGTACATCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGa                                                                                                                                                  <  2:210969/150‑1 (MQ=255)
     ccGGTACATCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGa                                                                                                                                                  >  2:2151414/1‑150 (MQ=255)
     ccGGTACATCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGACTGTTCGATGCCGGCGGCAATATCGGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGAAGCCAAGCAAGAACCCTCAGGCGCGGCCCTGa                                                                                                                                                  >  1:411310/1‑150 (MQ=255)
       ggTACATCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGt                                                                                                                                                <  2:2246331/150‑1 (MQ=255)
        gTACATCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGGCCGGGCCTGAggg                                                                                                                                               >  1:353163/1‑148 (MQ=255)
         tACATCGCCCGTGGGTTGCTGCCCGGTCAACGGCGTTGGCCTGTGCGATGCTGGCGGTAATGTCTGGGAGCTGCCTCGCCCGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGa                                                                                                                                              <  2:565244/150‑1 (MQ=255)
          aCATCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCATGTTCGGTGACGGCGGCAGTGTCTGGGCGCTGACTAGCGCGGTTTAGCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGAc                                                                                                                                             <  2:273511/150‑1 (MQ=255)
             tCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGc                                                                                                                                          <  1:1534154/150‑1 (MQ=255)
             tCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGc                                                                                                                                          <  2:1254623/150‑1 (MQ=255)
              cGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCt                                                                                                                                         <  2:1235996/150‑1 (MQ=255)
               gCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGGCGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCtt                                                                                                                                        <  2:125619/150‑1 (MQ=255)
                cccGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCCGCATCGCTGCCTTTATCGGCCAGTCCATGATGGGCAACGCGCCCTCTATCGCTACCCCCCAGGCCCGGCCCTGAGTGGCAGCTTc                                                                                                                                       >  1:1141988/1‑150 (MQ=255)
                 ccGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCCTCg                                                                                                                                      >  2:390731/1‑150 (MQ=255)
                   gTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGAc                                                                                                                                    <  1:2151414/150‑1 (MQ=255)
                      ggTTGCTTCCCGTCCAACAGCTTTGGCCTGTTCGATGCGGGCTGCAATGTCTTGGAGCTGACTGGCCAGGGCTATCGGCCCGGCCATGACGCACAACGCGACGCCAAGCTCGACCCCCCAGGCCCTGCCCTGGGGAACAGCTGCGACCCg                                                                                                                                 >  2:836697/1‑150 (MQ=255)
                                cGGCCAACGGCTTTGGCCTGTTCGATGCCGGTGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACCGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCg                                                                                                                       <  2:936855/150‑1 (MQ=255)
                                 ggCCAACGGCTTTGGCCTGTTCAATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCgg                                                                                                                      <  2:1046819/150‑1 (MQ=255)
                                  gCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCACGACGCACAGCGCGACGCAAACATAGCGGACGAGCACCCGTCTCTGAGTGACAGCTTCGACCCGGCAGACCCCGGc                                                                                                                     >  1:542056/1‑150 (MQ=255)
                                   ccAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGGCCGGGCCTGAggg                                                                                                                                               <  2:917385/123‑3 (MQ=255)
                                   ccAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGGCCGGGCCTGAggg                                                                                                                                               >  1:917385/1‑121 (MQ=255)
                                    cAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGt                                                                                                                   <  2:1357829/150‑1 (MQ=255)
                                      aCGGCTTTGGCCTTTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGc                                                                                                                 <  2:1053791/150‑1 (MQ=255)
                                           tttGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTg                                                                                                            >  2:1064760/1‑150 (MQ=255)
                                            ttGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTgg                                                                                                           <  2:1187637/150‑1 (MQ=255)
                                               gCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCGCGGGCTATCGTCCAAGCCATGACGCACAGCTCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGGGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCgg                                                                                                        >  2:1898711/1‑150 (MQ=255)
                                               gCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGAccc                                                                                                                                  <  2:1508803/124‑1 (MQ=255)
                                               gCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGAccc                                                                                                                                  >  1:1508803/1‑124 (MQ=255)
                                                ccTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGGCCGGGCCTGAggg                                                                                                                                               >  2:1790785/1‑108 (MQ=255)
                                                ccTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGGCCGGGCCTGAggg                                                                                                                                               <  1:1790785/110‑3 (MQ=255)
                                                 cTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTa                                                                                                      >  1:1848625/1‑150 (MQ=255)
                                                  tGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTaa                                                                                                     >  2:2227559/1‑150 (MQ=255)
                                                  tGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGACAGACCCCGGCGTACCGGTGGCGGTaa                                                                                                     <  1:1271566/150‑1 (MQ=255)
                                                    ttCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATc                                                                                                   >  2:1860390/1‑150 (MQ=255)
                                                    ttCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATc                                                                                                   <  1:1860390/150‑1 (MQ=255)
                                                         tGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAgg                                                                                              <  1:679840/150‑1 (MQ=255)
                                                         tGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAgg                                                                                              >  2:774525/1‑150 (MQ=255)
                                                          gCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAggc                                                                                             <  2:370946/150‑1 (MQ=255)
                                                            cggcggCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAggcgg                                                                                           >  2:458130/1‑150 (MQ=255)
                                                                  cAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCa                                                                                     <  2:1077790/150‑1 (MQ=255)
                                                                   aaTGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCAc                                                                                    <  1:1922153/150‑1 (MQ=255)
                                                                      gTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCtg                                                                                 >  1:1423673/1‑150 (MQ=255)
                                                                         tGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTgtgt                                                                              <  1:2236076/150‑1 (MQ=255)
                                                                          gggAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGTCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGtt                                                                             >  1:242645/1‑150 (MQ=255)
                                                                              gCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTcggc                                                                         <  1:1297397/150‑1 (MQ=255)
                                                                                 gACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGa                                                                      >  2:1631040/1‑150 (MQ=255)
                                                                                      ccACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCt                                                                 <  1:1555366/149‑1 (MQ=255)
                                                                                        aCGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCa                                                                                     >  2:1991445/1‑128 (MQ=255)
                                                                                        aCGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCa                                                                                     <  1:1991445/128‑1 (MQ=255)
                                                                                          gggCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCAt                                                             <  1:777664/150‑1 (MQ=255)
                                                                                            gCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATgc                                                           <  1:1631040/150‑1 (MQ=255)
                                                                                              tATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCg                                                                                                         >  1:1036124/1‑102 (MQ=255)
                                                                                              tATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCg                                                                                                         <  2:1036124/102‑1 (MQ=255)
                                                                                                 cGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTAc                                                      <  1:989918/150‑1 (MQ=255)
                                                                                                    ccaggccaTGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGc                                                   <  1:458130/150‑1 (MQ=255)
                                                                                                      aggccaTGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCgg                                                                                                        >  1:1046623/1‑95 (MQ=255)
                                                                                                        gccaTGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCt                                               >  2:1987152/1‑150 (MQ=255)
                                                                                                          caTGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCTTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCg                                             <  2:921551/150‑1 (MQ=255)
                                                                                                          caTGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGCCCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGc                                                   <  2:1112276/144‑1 (MQ=255)
                                                                                                          caTGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGc                                                   >  1:1112276/1‑144 (MQ=255)
                                                                                                                 cacaGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGGGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCg                                                                                                         <  2:523849/83‑1 (MQ=255)
                                                                                                                 cacaGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCg                                                                                                         >  1:523849/1‑83 (MQ=255)
                                                                                                                 cacaGCGCGACACCAAGTTCGCCCCCCCAGGCCAGGCCCTAAGGGGCAGCTTCGACCCAGCACACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGCCACGcc                                      >  2:1235076/1‑150 (MQ=255)
                                                                                                                    aGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGAACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCcagc                                   <  2:542056/150‑1 (MQ=255)
                                                                                                                       gcgACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCcagccgc                                >  2:411521/1‑150 (MQ=255)
                                                                                                                         gACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGGGGCGGTAATCAAAGGCGACTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCCCCCCTCGGCACGCcagccgccg                              >  1:981369/1‑148 (MQ=255)
                                                                                                                          aCGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCcagccgcagc                             <  1:390731/150‑1 (MQ=255)
                                                                                                                            gCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCcagccgcagccg                           <  1:774525/150‑1 (MQ=255)
                                                                                                                            gCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCcagccgcagccg                           >  2:2261058/1‑150 (MQ=255)
                                                                                                                            accAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCCCCTGTGTTCGGCGGACCTCTGCATGCGCTACCGCCCCTCGGCACGCcagccgcagccg                           <  1:1502240/149‑1 (MQ=255)
                                                                                                                             ccAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCgg                          >  2:1370936/1‑150 (MQ=255)
                                                                                                                              cAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGTGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGgt                         >  1:1840720/1‑150 (MQ=255)
                                                                                                                               aaGCTCGTCCCTTCAGGCCCGGCCCTAAGTGACATCTTCGTCTCTGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGgtg                        <  1:533757/150‑1 (MQ=255)
                                                                                                                                aGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCg                                             <  1:1276877/128‑1 (MQ=255)
                                                                                                                                aGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCg                                             >  2:1276877/1‑128 (MQ=255)
                                                                                                                                aGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGgtgt                       <  1:1370936/150‑1 (MQ=255)
                                                                                                                                 gCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGtt                      <  2:1455976/150‑1 (MQ=255)
                                                                                                                                  cTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTc                     >  2:1212333/1‑150 (MQ=255)
                                                                                                                                   tCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTATGCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCa                    >  1:2202826/1‑150 (MQ=255)
                                                                                                                                     tgtcacTCAGGGCCGGGCCTGAGGGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATg                  >  1:2213697/6‑150 (MQ=255)
                                                                                                                                     gACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTgtgt                                                                              <  1:392532/90‑1 (MQ=255)
                                                                                                                                     gACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTgtgt                                                                              >  2:392532/1‑90 (MQ=255)
                                                                                                                                      aCCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGTATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATga                 <  2:411310/150‑1 (MQ=255)
                                                                                                                                      aCCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATga                 <  1:2227559/150‑1 (MQ=255)
                                                                                                                                       ccccTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATgac                <  1:1064760/150‑1 (MQ=255)
                                                                                                                                        cccTCAGGCCCGGCCCTGAGGGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGGGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGGTGCATGCGCTACCGCCCCTCGGCACCCCACCCGCAGCGGGTGTTCATgagg               >  1:1958798/1‑148 (MQ=255)
                                                                                                                                         ccTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCCGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATgacga              >  2:775151/1‑150 (MQ=255)
                                                                                                                                           tCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGc                                                   <  1:561903/111‑1 (MQ=255)
                                                                                                                                           tCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGc                                                   >  2:561903/1‑111 (MQ=255)
                                                                                                                                            cAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCCGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATGACGACCt           <  1:398323/150‑1 (MQ=255)
                                                                                                                                             aGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATGACGACCTc          >  2:186551/1‑150 (MQ=255)
                                                                                                                                               gcccggcccTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATGACGACCTCGc        >  1:1647628/1‑150 (MQ=255)
                                                                                                                                                 ccggcccTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATGACGACCTCGCAc      >  1:1733920/1‑150 (MQ=255)
                                                                                                                                                 ccggcccTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATGACGACCTCGCAc      <  1:1883159/150‑1 (MQ=255)
                                                                                                                                                  cggcccTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCg                                                                                       <  2:753853/68‑1 (MQ=255)
                                                                                                                                                  cggcccTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCg                                                                                       >  1:753853/1‑68 (MQ=255)
                                                                                                                                                  cggcccTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATGACGACCTCGCACg     >  2:2031099/1‑150 (MQ=255)
                                                                                                                                                     cccTGAGTGACAGCTTCGACCCGGCAGCCCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCTAGCCGCAGCCGGTGTTCATGACGACCTCGCACGTgg  <  2:276336/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TTTTACCGGTACATCGCCCGTGGGTTGCTTCCCGGCCAACGGCTTTGGCCTGTTCGATGCCGGCGGCAATGTCTGGGAGCTGACTCGCACGGGCTATCGGCCAGGCCATGACGCACAGCGCGACGCCAAGCTCGACCCCTCAGGCCCGGCCCTGAGTGACAGCTTCGACCCGGCAGACCCCGGCGTGCCGGTGGCGGTAATCAAAGGCGGCTCGCACCTGTGTTCGGCGGACCGCTGCATGCGCTACCGCCCCTCGGCACGCCAGCCGCAGCCGGTGTTCATGACGACCTCGCACGTGG  >  NC_002947/3791304‑3791602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: