| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,804,064 | C→G | 6.9% | intergenic (‑105/‑39) | PP_3361 ← / → PP_3362 | aminotransferase/AsnC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,804,064 | 0 | C | G | 6.9% | 277.0 / 8.5 | 87 | intergenic (‑105/‑39) | PP_3361/PP_3362 | aminotransferase/AsnC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (39/42); new base G (2/4); total (41/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
GCTTGCCGAAAACCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTCCCGAAGTGCC > NC_002947/3803918‑3804210 | gCTTGCCGAAAACCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑Ac < 1:2352056/150‑1 (MQ=255)gCTTGCCGAAAACCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑Ac > 1:1911510/1‑150 (MQ=255) gAAAACCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATa > 2:457354/1‑150 (MQ=255) aaaCCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACCCCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTCGGA‑ACCGGCATAAt < 1:250028/150‑1 (MQ=255) ccGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGTCATTATGCCGG‑TCGGAACCGGCATAATgcc < 1:1673098/150‑3 (MQ=255) cGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACg < 2:727494/150‑1 (MQ=255) tGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAg < 1:561804/150‑1 (MQ=255) gcggggTGGGAAAGGTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGTCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGc < 1:27859/147‑1 (MQ=255) gggAAAGGTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACTCTGCATACGGTCGGTCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCaa < 1:1225321/150‑1 (MQ=255) gggAAAGGTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCaa < 2:1403003/150‑1 (MQ=255) ggTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCt < 2:1911510/150‑1 (MQ=255) gTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATTACGGCAAGCTTATCAAGGGGCTg > 1:308019/1‑150 (MQ=255) tCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGc > 2:875954/1‑150 (MQ=255) tCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGc > 1:662583/1‑150 (MQ=255) tGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCaa < 1:2363299/150‑1 (MQ=255) cATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGc < 2:308019/150‑1 (MQ=255) cATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGc < 1:1298555/150‑1 (MQ=255) cATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGc < 2:691343/150‑1 (MQ=255) cATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGc < 1:457354/150‑1 (MQ=255) tatCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGt < 2:306487/150‑1 (MQ=255) tatCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGt < 1:391166/150‑1 (MQ=255) atcatcAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTg > 1:320648/1‑150 (MQ=255) gTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGAc < 1:1626455/150‑1 (MQ=255) gTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGAc > 1:409552/1‑150 (MQ=255) tCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGc < 1:852383/150‑1 (MQ=255) aGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTaaa < 2:1065710/150‑1 (MQ=255) gcTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATcg > 1:2031230/1‑150 (MQ=255) gcTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATcg > 1:1217847/1‑150 (MQ=255) gcTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGAGcg < 2:1137503/150‑1 (MQ=255) tGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGAt > 1:716508/1‑150 (MQ=255) tGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGAt > 1:2052728/1‑150 (MQ=255) ttttCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCt > 2:1669831/1‑150 (MQ=255) tCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGa < 2:409552/150‑1 (MQ=255) gCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACt > 1:2076956/1‑150 (MQ=255) gCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACt > 1:701201/1‑150 (MQ=255) tGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTGGGGCGCAACAGGCATTATGCCGGTGCCG‑ACCGCCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTc > 1:818531/1‑150 (MQ=255) tCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGa > 1:41087/1‑150 (MQ=255) tCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGa > 1:2066465/1‑150 (MQ=255) cATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACATGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGaa < 1:1737178/150‑1 (MQ=255) cATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGaa < 2:2100778/150‑1 (MQ=255) cATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGaa < 2:320648/150‑1 (MQ=255) tGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAgg < 1:875954/150‑1 (MQ=255) cgccgcCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGAc < 1:683142/150‑1 (MQ=255) cgccgAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAg > 1:1515362/1‑132 (MQ=255) cgccgAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAg > 1:1514480/1‑132 (MQ=255) cgccgAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAg < 2:1514480/132‑1 (MQ=255) cgccgAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAg < 2:1515362/132‑1 (MQ=255) cgccgAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGAcgcg > 2:1988435/1‑150 (MQ=255) gAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTa > 1:1505317/1‑150 (MQ=255) cGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTga > 2:1148679/1‑149 (MQ=255) ccTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGa < 1:723798/127‑1 (MQ=255) ccTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGa > 2:723798/1‑127 (MQ=255) ccTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAg > 1:1919462/1‑150 (MQ=255) ccTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAg > 2:1199013/1‑150 (MQ=255) ccTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAg > 2:1990970/1‑150 (MQ=255) ccTGCATACGGGCGGGCGCGACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAg > 2:717123/1‑150 (MQ=255) ccTGCATACGAACGCGCGCAACATTCATTATTCCGGTTCCT‑ACGGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGTACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAg > 2:1926727/1‑150 (MQ=255) tGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGAc < 2:466790/53‑1 (MQ=255) tGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGAc > 1:466790/1‑53 (MQ=255) tGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGc > 1:554607/1‑150 (MQ=255) tACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTa < 2:1919462/150‑1 (MQ=255) cGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGa < 1:1838309/108‑1 (MQ=255) cGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGa > 2:1838309/1‑108 (MQ=255) gcgcAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAgccgg > 2:2348266/1‑146 (MQ=255) gcgcAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAgccgg < 1:2348266/146‑1 (MQ=255) cAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATa < 1:1199013/150‑1 (MQ=255) aaCAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAgccggcctatgcg > 2:2241362/1‑144 (MQ=255) aaCAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAg < 2:2052728/150‑1 (MQ=255) aaCAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAg < 2:662583/150‑1 (MQ=255) aaCAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAg > 1:1680296/1‑150 (MQ=255) cAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGc < 1:1669831/150‑1 (MQ=255) cgtcATTATGCCGG‑TCGGAACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGt < 1:1401176/59‑1 (MQ=17) cgtcATTATGCCGG‑TCGGAACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGt > 2:1401176/4‑62 (MQ=17) aGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCtt < 2:1184827/92‑1 (MQ=255) aGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCtt > 1:1184827/1‑92 (MQ=255) aGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGcc > 1:2288121/1‑150 (MQ=255) tcATTATGCCGGTCGGA‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAg > 1:1930859/2‑76 (MQ=25) tcATTATGCCGG‑TCGGAACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAg < 2:1930859/75‑1 (MQ=25) gCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCtt > 2:289923/1‑150 (MQ=255) cATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCttt > 2:36764/1‑150 (MQ=255) aTTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTc < 1:36764/150‑1 (MQ=255) gCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTCCCGaa > 2:417174/1‑150 (MQ=255) gCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTCCCGaa < 2:716508/150‑1 (MQ=255) ccGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTCCCGAAg < 1:289923/150‑1 (MQ=255) cGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTCCCGAAGt < 2:2076956/150‑1 (MQ=255) gTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTCCCGAAGTGc < 1:1990970/150‑1 (MQ=255) ttCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTCCCGAAGTGcc < 2:1505317/150‑1 (MQ=255) | GCTTGCCGAAAACCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCCGAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCG‑ACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTCCCGAAGTGCC > NC_002947/3803918‑3804210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |