BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,812,702	A→G	13.9%	D328G (GAC→GGC)	PP_3368 →	MFS transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,812,702	0	A	G	13.9%	260.7 / 27.6	108	D328G (GAC→GGC)	PP_3368	MFS transporter
Reads supporting (aligned to +/- strand): ref base A (56/37); new base G (11/4); total (67/41)
Fisher's exact test for biased strand distribution p-value = 4.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.98e-01

Only 100 of 110 total aligned reads displayed.

CCGCGCCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGACTGCGC  >  NC_002947/3812553‑3812851

ccGCGCCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGa                                                                                                                                                       <  1:1875609/150‑1 (MQ=255)

  gcgcCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGGAACTCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACa                                                                                                                                                     >  1:737194/1‑150 (MQ=255)

  gcgcCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACa                                                                                                                                                     >  1:1115422/1‑150 (MQ=255)

  gcgcCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACa                                                                                                                                                     >  2:2042895/1‑150 (MQ=255)

  gcgcCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACa                                                                                                                                                     <  1:2042895/150‑1 (MQ=255)

      cGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGc                                                                                                                                                 <  2:2077534/150‑1 (MQ=255)

            cTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGa                                                                                                                                           <  2:1115422/150‑1 (MQ=255)

             ttGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGTACATTGcc                                                                                                                                                >  1:1696270/1‑144 (MQ=255)

             ttGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGcc                                                                                                                                                <  2:1696270/144‑1 (MQ=255)

             ttGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAg                                                                                                                                          >  1:1164019/1‑150 (MQ=255)

               ggaaCTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGgc                                                                                                                                        <  1:257432/147‑1 (MQ=255)

               ggTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGGCAATGTCCATGAGgc                                                                                                                                        <  2:734113/150‑1 (MQ=255)

                  aCTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTCCCTTCGCCACAAAGTCTTTGTGTAGCCTGCGGCTGGGCATAGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGcc                                                                                                                                     <  1:1740921/150‑1 (MQ=255)

                   cTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGACCGCCTTGGCGGCACCGCTACA‑CATCCGCCTCATGGACATTGCCCATGAGGCGCCt                                                                                                                                    <  1:1316545/150‑1 (MQ=255)

                      aTGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGAACCATGATCGCCTTCGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCTCCTAGc                                                                                                                                 >  2:148161/1‑150 (MQ=255)

                        gtgGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCt                                                                                                                               <  2:1973282/150‑1 (MQ=255)

                          ggtcggtcGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTgg                                                                                                                             <  2:1164019/150‑1 (MQ=255)

                           gtcggtcgCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCGTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGc                                                                                                                            >  1:18745/1‑150 (MQ=255)

                           gtcggtcgCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGc                                                                                                                            >  1:548832/1‑150 (MQ=255)

                           gtcggtcgCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGc                                                                                                                            >  1:545338/1‑150 (MQ=255)

                            tcggtcgCCGTGCTGCTGTTCTTTACCTTCGCAGCGCGGTCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCa                                                                                                                           >  1:1667008/1‑150 (MQ=255)

                                tcgCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAgcgg                                                                                                                       >  1:2232035/1‑150 (MQ=255)

                                 cgCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAgcggc                                                                                                                      <  2:1067409/150‑1 (MQ=255)

                                    cGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGa                                                                                                                                           >  2:257481/1‑126 (MQ=255)

                                    cGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGa                                                                                                                                           <  1:257481/126‑1 (MQ=255)

                                     gTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTcc                                                                                                                  <  1:1139015/150‑1 (MQ=255)

                                        ctgctgTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCTCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAAc                                                                                                               <  2:287669/150‑1 (MQ=255)

                                        ctgctgTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAAc                                                                                                               <  2:548832/150‑1 (MQ=255)

                                         tgctgTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTg                                                                                                                              >  1:1452796/1‑134 (MQ=255)

                                          gctgTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCa                                                                                                             >  2:118148/1‑150 (MQ=255)

                                             gTTCTTTACCTTCGCCGCCCGGGCGCTGTGGAGCTTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATgc                                                                                                          <  2:1053733/150‑1 (MQ=255)

                                             gTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGGCAATGTCCATGa                                                                                                                                           <  1:2082188/117‑1 (MQ=255)

                                             gTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGGCAATGTCCATGa                                                                                                                                           >  2:2082188/1‑117 (MQ=255)

                                             gTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATgc                                                                                                          <  2:2016315/150‑1 (MQ=255)

                                              ttCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATgcg                                                                                                         <  2:18745/150‑1 (MQ=255)

                                                     ccTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGGCAATGTCCATGAGgcggat                                                                                                                                    >  1:1604579/1‑113 (MQ=39)

                                                     ccTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGGCAATGTCCATGAGgcggat                                                                                                                                    <  2:1604579/116‑4 (MQ=39)

                                                       ttCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAAc                                                                                                >  2:489555/1‑150 (MQ=255)

                                                       ttCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATAGGCTTGGTGACTAGCATGACCTCCTTGGCGGCTCCTCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAAc                                                                                                >  1:1252537/1‑150 (MQ=255)

                                                             gccCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGcc                                                                                          >  1:25546/1‑150 (MQ=255)

                                                              cccAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCa                                                                                         <  2:1667008/150‑1 (MQ=255)

                                                                      cTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTg                                                                                 <  2:2095924/150‑1 (MQ=255)

                                                                        gtgGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTggg                                                                               <  1:353401/150‑1 (MQ=255)

                                                                              cgtgctgctgGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACAATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTg                                                                         >  1:1892860/3‑150 (MQ=255)

                                                                                 gctgctgGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCt                                                                      >  1:1943183/1‑150 (MQ=255)

                                                                                   tgctgGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTgg                                                                    <  2:1498504/150‑1 (MQ=255)

                                                                                   tgctgGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGACTGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGACGTGGCTgg                                                                    >  2:1053846/1‑150 (MQ=255)

                                                                                     ctgGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGa                                                                  <  2:25546/150‑1 (MQ=255)

                                                                                     ctgGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGa                                                                  <  1:2081669/150‑1 (MQ=255)

                                                                                      tgGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGccc                                                                                   <  2:1777748/132‑1 (MQ=255)

                                                                                         gCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCa                                                              <  1:343178/150‑1 (MQ=255)

                                                                                          cATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCAt                                                             <  1:1203100/150‑1 (MQ=255)

                                                                                              ggCCTGGTGGGCACCATGAACGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCg                                                         >  2:640717/1‑150 (MQ=255)

                                                                                               gCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATgg                                                           <  1:374949/147‑1 (MQ=255)

                                                                                               gCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATgg                                                           >  2:374949/1‑147 (MQ=255)

                                                                                                 cTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATc                                                      <  1:1663691/150‑1 (MQ=255)

                                                                                                    gtggGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACt                                                   >  2:251516/1‑150 (MQ=255)

                                                                                                      cggCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGc                                                 >  2:1658139/2‑150 (MQ=255)

                                                                                                       ggCACCATGATCACCTACGCCACACAGC‑ACACGCTCCGCCTACAGGACATTGCTCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGCTCACtcca                                                <  2:737194/150‑4 (MQ=255)

                                                                                                          aCCATGATCGCCGTGGCGGCACCGCGACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGc                                             >  2:1354608/1‑150 (MQ=255)

                                                                                                            cATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGc                                                                                                                            >  1:1744820/1‑69 (MQ=255)

                                                                                                            cATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCAt                                           >  1:354194/1‑150 (MQ=255)

                                                                                                               gATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATggg                                        >  1:1129694/1‑150 (MQ=255)

                                                                                                                 tCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCt                                      >  2:1018907/1‑150 (MQ=255)

                                                                                                                     cTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGAc                                  >  2:368828/1‑150 (MQ=255)

                                                                                                                     cTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGCCGCCGAACCTGCCAGCGGCGTCCAACCATTCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCCGGGAGGCATGGCGATCACTGCCGGCGTGGGCTGGAc                                  >  2:368788/1‑150 (MQ=255)

                                                                                                                        ggcggcACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAg                               >  2:672214/1‑150 (MQ=255)

                                                                                                                              aCCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAAACTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCgg                         >  1:549470/1‑150 (MQ=255)

                                                                                                                                  cTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGa                        <  1:568395/147‑1 (MQ=255)

                                                                                                                                  cTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGa                        >  2:568395/1‑147 (MQ=255)

                                                                                                                                  cTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATAc                     >  2:1688714/1‑150 (MQ=255)

                                                                                                                                    aCA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACAt                   >  2:345855/1‑150 (MQ=255)

                                                                                                                                      a‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCg                 >  1:2172920/1‑150 (MQ=255)

                                                                                                                                         aTCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGgc               >  1:1117806/1‑150 (MQ=255)

                                                                                                                                         aTCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGgc               >  1:1937769/1‑150 (MQ=255)

                                                                                                                                           ccGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGgcgc             >  1:1596565/1‑150 (MQ=255)

                                                                                                                                             gCCTCATGGGCAATGTCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGa                        <  2:595888/137‑1 (MQ=255)

                                                                                                                                             gCCTCATGGGCAATGTCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGa                        >  1:595888/1‑137 (MQ=255)

                                                                                                                                             gCCTCATGGGCAATGTCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGcgccg           >  1:1692002/1‑150 (MQ=255)

                                                                                                                                             gCCTCATGGGCAATGTCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGcgccg           >  2:389/1‑150 (MQ=255)

                                                                                                                                               cTCATGGGCAATGTCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCcgcg         >  1:521940/1‑150 (MQ=255)

                                                                                                                                                tCATGGGCAATGTCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCACTGCCCTGGGGCCTTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGa        >  2:1891003/1‑150 (MQ=255)

                                                                                                                                                tCATGGGCAATGTCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGa        >  1:2220611/1‑150 (MQ=255)

                                                                                                                                                tCATGGGCAATGTCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGa        >  1:1632612/1‑150 (MQ=255)

                                                                                                                                                tCATGGGCAATGTCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGa        >  2:726903/1‑150 (MQ=255)

                                                                                                                                                tCATGGGCAATGTCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGAACAGCACCGGATACATCGGCGCCGCGa        >  1:383036/1‑150 (MQ=255)

                                                                                                                                                tCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTgg                                                                    >  1:379241/1‑90 (MQ=255)

                                                                                                                                                tCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTgg                                                                    <  2:379241/90‑1 (MQ=255)

                                                                                                                                                  aTGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGc                                                               >  2:2109530/1‑93 (MQ=255)

                                                                                                                                                  aTGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGc                                                               <  1:2109530/93‑1 (MQ=255)

                                                                                                                                                  aTGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGACt      >  1:498665/1‑150 (MQ=255)

                                                                                                                                                  aTGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGACt      >  2:1566934/1‑150 (MQ=255)

                                                                                                                                                  aTGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGACt      >  2:1466027/1‑150 (MQ=255)

                                                                                                                                                  aTGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGACAATCACTGCGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGACt      >  1:1852233/1‑150 (MQ=255)

                                                                                                                                                  aTGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCAGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGACt      >  1:1999884/1‑150 (MQ=255)

                                                                                                                                                   tGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGACTg     >  2:1373074/1‑150 (MQ=255)

                                                                                                                                                   tGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGACTg     >  1:144095/1‑150 (MQ=255)

                                                                                                                                                    ggACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGcgccgc          >  2:706907/1‑144 (MQ=255)

                                                                                                                                                     gACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGgc               >  1:163606/1‑138 (MQ=255)

                                                                                                                                                     gACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGgc               <  2:163606/138‑1 (MQ=255)

CCGCGCCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACA‑GATCCGCCTCATGGACATTGCCCATGAGGCGCCTAGCCTGGCAGCGGCGTCCAACCATGCGGCGTTCAACCTGGCCAATGCCCTGGGGCCGTGGCTGGGAGGCATGGCGATCACTGCCGGCATGGGCTGGACCAGCACCGGATACATCGGCGCCGCGACTGCGC  >  NC_002947/3812553‑3812851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`