| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,851,001 | A→C | 11.3% | N147H (AAT→CAT) | PP_3398 → | curli fiber surface‑exposed nucleator CsgB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,851,001 | 0 | A | C | 11.3% | 233.3 / 20.5 | 90 | N147H (AAT→CAT) | PP_3398 | curli fiber surface‑exposed nucleator CsgB |
| Reads supporting (aligned to +/- strand): ref base A (38/41); new base C (4/6); total (43/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01 | |||||||||||
TCAGCCAACAGGGAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTCCCAGACCCAGGA > NC_002947/3850855‑3851144 | tcaGCCAACAGGGAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATg < 1:102187/150‑1 (MQ=255)tcaGCCAACAGGGAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGACTCAACAGCTCCGTGACCCAGGCTGGCAATg < 2:2258266/150‑1 (MQ=255) aGCCAACAGGGAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGGGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGc > 1:253219/1‑150 (MQ=255) acacGGAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCa < 1:191155/150‑1 (MQ=255) gggAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCCATTGCCAGCCTgg < 1:415823/150‑2 (MQ=255) gggAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCCATTGCCAGCCTgg < 2:319166/150‑2 (MQ=255) gggAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCCATTGCCAGCCTgg < 2:302463/150‑2 (MQ=255) ggAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACCGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGtt > 1:151109/1‑150 (MQ=255) gAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTc < 1:951112/150‑1 (MQ=255) aTGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGa < 1:554400/150‑1 (MQ=255) gCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCCATTGCCAGCCTgg > 1:1616329/1‑141 (MQ=255) gCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCCATTGCCAGCCTgg < 2:1616329/142‑2 (MQ=255) cAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCAc < 2:2297375/150‑1 (MQ=255) cAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCAc > 1:1896900/1‑150 (MQ=255) aCAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCAccc < 1:495278/150‑1 (MQ=255) cAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCa > 1:1627797/1‑150 (MQ=255) tGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATa < 2:151109/150‑1 (MQ=255) tCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGa > 1:2255494/1‑150 (MQ=255) gATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATa > 2:1944078/1‑150 (MQ=255) cGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGAcc < 2:1223879/150‑1 (MQ=255) gCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCt > 2:325397/1‑150 (MQ=255) gCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCt > 2:169752/1‑150 (MQ=255) ccAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCCCGGCGGGGCTCAACAGCTCCGTGACCCCGCCACGCGTCCACCAGCATGTTCAGATCACCCAATACCGATAGACCTg > 1:2340405/1‑150 (MQ=255) cAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCAcc > 1:812589/1‑132 (MQ=255) cAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCAcc < 2:812589/132‑1 (MQ=255) agagCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGa < 1:1513612/150‑1 (MQ=255) agagCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGa < 2:833128/150‑1 (MQ=255) agCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAgg < 2:188647/150‑1 (MQ=255) agcagcaACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGAAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGcaccac < 1:1340976/150‑1 (MQ=255) gcagcaACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCaccacc < 1:1194947/150‑1 (MQ=255) agcaACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCAt < 1:2004273/150‑1 (MQ=255) aacaacGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAg > 1:1652261/1‑129 (MQ=255) aacaacGCCGCCATCGAGCACATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAg < 2:1652261/129‑1 (MQ=255) aacGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACaa > 1:831462/1‑150 (MQ=255) ccgccATCGGGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAgctc < 2:253219/150‑1 (MQ=255) cgccATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTACAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAgctcg > 1:1011722/1‑150 (MQ=255) tCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTGAGGTCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCg > 2:340955/1‑150 (MQ=255) gAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCCATTGCCAGcctgg > 1:1331570/1‑88 (MQ=255) gAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCCATTGCCAGCCTgg < 2:1331570/92‑2 (MQ=255) gAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGtt < 2:2340405/150‑1 (MQ=255) aTCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGc > 1:708044/1‑150 (MQ=255) tCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGtt < 1:2219116/143‑1 (MQ=255) tCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGtt > 2:2219116/1‑143 (MQ=255) gCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCt > 2:1161556/1‑150 (MQ=255) gCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCATTATGCACCACCATGTACAAGCTCGCTCCGTTACGTGCCgat > 2:999789/1‑148 (MQ=255) cAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTa > 1:552965/1‑150 (MQ=255) acaacaGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTc < 2:2087877/150‑1 (MQ=255) aacaGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCt > 2:1394643/1‑150 (MQ=255) acaGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGCGGAACCACGATGTGCAAGCTCGTTCCGTTGAGTGCCGCTATCGTCCTg < 2:1835780/150‑1 (MQ=255) caGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTgg > 1:1067363/1‑150 (MQ=255) tcgcCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCCCTCCGTTAAGTGCACCTATCGTCCtatcc > 2:410925/2‑146 (MQ=255) cgcCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGccc > 2:231051/1‑150 (MQ=255) cgcCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGccc < 1:416461/150‑1 (MQ=255) cAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCg > 1:435575/1‑150 (MQ=255) cATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAg < 2:1896900/150‑1 (MQ=255) tCGTGCACTCCGGCTCAGGGCTCAACAGCACCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGt < 1:169752/150‑1 (MQ=255) gTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCa < 1:1944078/150‑1 (MQ=255) tGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAg > 2:1574705/1‑150 (MQ=255) gCAGTCCGGATCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAgg < 2:925811/150‑1 (MQ=255) gTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCa < 1:591521/150‑1 (MQ=255) tCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCAt < 2:1780830/150‑1 (MQ=255) cGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATgg < 2:708044/150‑1 (MQ=255) ggCTCAGGGCTAAACAGCTCCGTGACCCAGGCTGGCAATGGCAAGCATGTTCAGATCACCCAACACCACTACCCCAGTATGCACCACCATGGACAAGCTCGCTCCGTTAAGTGCCGCTAGCGTCCTGGCCCTCGCAGGTCAGGCCATGgc < 1:900304/150‑1 (MQ=255) cTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGgctg < 2:1067363/150‑1 (MQ=255) tCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTAt < 2:1307141/117‑1 (MQ=255) tCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTAt > 1:1307141/1‑117 (MQ=255) gggCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAgct < 1:1138933/93‑1 (MQ=255) gggCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAgct > 2:1138933/1‑93 (MQ=255) cTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAg > 2:444726/1‑150 (MQ=255) tCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGc > 2:1981073/1‑150 (MQ=255) aaCAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCg > 1:702411/1‑110 (MQ=255) aaCAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCg < 2:702411/110‑1 (MQ=255) aaCAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCAc > 2:458993/1‑150 (MQ=255) aCAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCAcc > 2:1743155/1‑150 (MQ=255) cTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAg < 2:2063700/120‑1 (MQ=255) cTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAg > 1:2063700/1‑120 (MQ=255) tCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTc > 2:1356986/1‑150 (MQ=255) tCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTc < 2:1627797/150‑1 (MQ=255) ccGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTcc < 1:1161556/150‑1 (MQ=255) cGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTccc > 1:1810297/1‑150 (MQ=255) gTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTCCCa < 2:1810297/150‑1 (MQ=255) cccAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTCCCAGAcc > 2:1579947/1‑150 (MQ=255) ccAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTCCCAGAccc > 1:1248364/1‑150 (MQ=255) catgCTGGCCATTGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTCCCAGACCCa > 2:1489307/4‑150 (MQ=255) cAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTCCCAGACCCa < 2:2352328/150‑1 (MQ=255) atgCTGGCCATTGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTCCCAGACCCa > 2:208058/3‑149 (MQ=255) atgCTGGCCATTGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTCCCAGACCCa < 1:208058/147‑1 (MQ=255) gCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTCCCAGACCCAGGa > 1:1559830/1‑150 (MQ=255) cAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCt < 1:1165145/91‑1 (MQ=255) cAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCt > 2:1165145/1‑91 (MQ=255) aaTGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTaa < 1:983130/74‑1 (MQ=255) aaTGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTaa > 2:983130/1‑74 (MQ=255) | TCAGCCAACAGGGAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCCAGCATCGTGCAGTCCGGCTCAGGGCTCAACAGCTCCGTGACCCAGGCTGGCAATGGCCAGCATGTTCAGATCACCCAATACCGATAGACCTGGAGGCACCACCATGTACAAGCTCGCTCCGTTAAGTGCCGCTATCGTCCTGGCCCTCGCAGGTCAGGCCATGGCTGCTGACAGCACCTCGTCCCAGACCCAGGA > NC_002947/3850855‑3851144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |