| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,866,969 | G→A | 9.0% | intergenic (‑48/‑159) | PP_3415 ← / → gnuK | LacI family transcriptional regulator/D‑gluconate kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,866,969 | 0 | G | A | 9.0% | 243.2 / 10.7 | 87 | intergenic (‑48/‑159) | PP_3415/gnuK | LacI family transcriptional regulator/D‑gluconate kinase |
| Reads supporting (aligned to +/- strand): ref base G (34/45); new base A (3/5); total (37/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.58e-01 | |||||||||||
AAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTCATCGGCGAGACAGCGCTATCTCAC > NC_002947/3866827‑3867112 | aaGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCCGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCt < 1:710662/150‑1 (MQ=255) gcgcgcGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGtc < 2:1049740/150‑1 (MQ=255) gcgcgAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGtctc > 1:1555097/1‑150 (MQ=255) gcgcgAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGACCGGGGTTGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGtctc > 1:62122/1‑150 (MQ=255) gcgAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGCACGGCCACTAAGATCGCGCTGTCTCAg < 2:1842871/150‑1 (MQ=255) gcgAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCa > 1:939422/1‑149 (MQ=255) gcgAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCa < 2:939422/149‑1 (MQ=255) gcgAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAg < 2:599711/150‑1 (MQ=255) gcgAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAg < 2:368029/150‑1 (MQ=255) aaGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGAt < 1:1990676/150‑1 (MQ=255) gCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGc < 1:1237978/150‑1 (MQ=255) cGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCa > 1:1591485/1‑150 (MQ=255) cGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCa < 2:1555097/150‑1 (MQ=255) ggTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAg > 2:708272/1‑150 (MQ=255) gTAATCGGGGAAGCCCCGGAAAGCATGGCAAGGTTCCACAGTGTAGGCCGCGTGGTAGTTCGGGAGCTGTGGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGATAGCGCTGTCTCAGGATGCAgg < 2:1728140/150‑1 (MQ=255) gTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAgcg < 1:1649074/133‑1 (MQ=255) gTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAgcg > 2:1649074/1‑133 (MQ=255) cGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATg < 2:3502/150‑1 (MQ=255) ggggAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGt > 1:213701/1‑150 (MQ=255) ggggAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTAC‑GCCCCTGACAAGATAGAGTTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGt > 2:695164/1‑150 (MQ=255) aaaCCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATc < 2:1056889/150‑1 (MQ=255) cccGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTg > 1:536969/1‑150 (MQ=255) cccGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTAAGGATGCAGGCAATGTAATCTTTg > 2:2287367/1‑150 (MQ=255) ccGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTgg < 1:787370/150‑1 (MQ=255) ccGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTgg < 2:536969/150‑1 (MQ=255) ggAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTa < 1:168869/150‑1 (MQ=255) aaGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGACAAGTAATCTTTGGTagca < 1:695164/150‑1 (MQ=255) tGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCttt < 1:259317/138‑1 (MQ=255) tGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCttt > 2:259317/1‑138 (MQ=255) gCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGATAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGccacca > 2:2104291/1‑150 (MQ=255) cTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCAcgcg < 2:1591485/150‑1 (MQ=255) cTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCAcgcg > 1:1098177/1‑150 (MQ=255) ttCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTa > 2:2006911/1‑135 (MQ=255) ttCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTa < 1:2006911/135‑1 (MQ=255) ttCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGcc > 1:989687/1‑141 (MQ=255) ttCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGcc < 2:989687/141‑1 (MQ=255) ttCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACgcgc < 2:372121/150‑1 (MQ=255) gCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGAAATGATGCGACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGc > 1:2100955/1‑150 (MQ=255) cAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGcca < 2:1098177/150‑1 (MQ=255) gggACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGACCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGc < 1:1457618/150‑1 (MQ=255) ggACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCg > 2:740775/1‑150 (MQ=255) gacCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGATAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCa > 2:1615094/1‑150 (MQ=255) cTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTagca < 2:2058507/118‑1 (MQ=255) cTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTagca > 1:2058507/1‑118 (MQ=255) cTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATAc < 1:708272/150‑1 (MQ=255) tGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACt < 2:1628506/150‑1 (MQ=255) gTTCGGGGGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGt > 2:1089726/1‑150 (MQ=255) ttCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTg > 2:76520/1‑106 (MQ=255) ttCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTg < 1:76520/106‑1 (MQ=255) ttCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTa < 1:122238/150‑1 (MQ=255) tCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTaa < 2:610168/150‑1 (MQ=255) tCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTaa < 2:2100955/150‑1 (MQ=255) ggAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTAGTACTTGCAAGGATTGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTAGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGa > 2:2082511/1‑150 (MQ=255) gggCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGAc < 1:1089726/148‑1 (MQ=255) gAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGAc > 2:789081/1‑150 (MQ=255) gAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTAAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGAc < 1:2287367/150‑1 (MQ=255) gCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGATAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACaa < 2:1956899/150‑1 (MQ=255) cGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAAt < 1:740775/150‑1 (MQ=255) cATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAacac < 2:213701/150‑1 (MQ=255) tGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCg < 1:1941606/150‑1 (MQ=255) gA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAAt > 2:2132108/1‑74 (MQ=255) gA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAAt < 1:2132108/74‑1 (MQ=255) atttttgtAATTTTACTACTTGCACGGAGAGGGAACGGCGACTACTGTCGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACACGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGTCCAATAACACCggg < 2:916561/146‑1 (MQ=255) tgttgtAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTgg < 1:646196/82‑1 (MQ=255) tgttgtAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTgg > 2:646196/1‑82 (MQ=255) ttttACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGACTg > 2:1425394/1‑150 (MQ=255) ttACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGtt > 1:388666/1‑150 (MQ=255) tactacTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCCTTCCCCTTGTGGAGGTGGCTGTTc < 2:1419232/150‑1 (MQ=255) tactacTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTc < 2:1416415/150‑1 (MQ=255) actactTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCg > 1:1317104/1‑150 (MQ=255) tactTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTc > 2:781069/1‑150 (MQ=255) ttGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGt > 2:1876394/1‑142 (MQ=255) ttGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGt < 1:1876394/142‑1 (MQ=255) ttGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTCATc > 2:97862/1‑150 (MQ=255) ttGCAAGGAGAGGGAACGGCCACTAAGATAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTCATc > 1:1848346/1‑150 (MQ=255) aaGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTCATCGGCg > 1:696419/1‑150 (MQ=255) ggAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTCATCGGCGAGACAgcg > 2:2132256/1‑150 (MQ=255) aaCGGCCACTAAGATAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTCATCGGCGAGACAGCGCt < 1:2104291/150‑1 (MQ=255) ggCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTCATCGGCGAGACAGCGCTAtc < 2:1317104/150‑1 (MQ=255) gCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCACCACCAGGCGTc > 1:2265825/1‑79 (MQ=255) gCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCACCACCAGGCGTc < 2:2265825/79‑1 (MQ=255) ccACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTCATCGGCGAGACAGCGCTAtctc > 1:1344724/1‑150 (MQ=255) cACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGa > 2:2276935/1‑113 (MQ=255) cACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGa < 1:2276935/113‑1 (MQ=255) aCTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTCATCGGCGAGACAGCGCTATCTCAc < 1:486045/150‑1 (MQ=255) aCTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTCATCGGCGAGACAGCGCTATCTCAc < 1:2132256/150‑1 (MQ=255) aCTAAGATAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTCATCGGCGAGACAGCGCTATCTCAc < 2:1848346/150‑1 (MQ=255) | AAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGACGACCTGTAGTTCGGGAGCCGGTGCGGGACATGA‑ATGTTGTAATTTTACTACTTGCAAGGAGAGGGAACGGCCACTAAGGTAGCGCTGTCTCAGGATGCAGGCAATGTAATCTTTGGTAGCAGCCACCACGCGCTCGCCACCAGGCGTCCATACTGCGTAAGGACAAGACCAATAACACCGGGGAGGTGGCTGTTCGTCATCGGCGAGACAGCGCTATCTCAC > NC_002947/3866827‑3867112 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |