| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,884,682 | C→T | 7.8% | L175L (CTG→TTG) | PP_3429 → | two component system response regulator/sensor histidine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,884,682 | 0 | C | T | 7.8% | 264.1 / 8.2 | 89 | L175L (CTG→TTG) | PP_3429 | two component system response regulator/sensor histidine kinase |
| Reads supporting (aligned to +/- strand): ref base C (40/42); new base T (2/5); total (42/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
CGGCGGCGACAGTACGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATGGGCCGCGAGGCCGTT > NC_002947/3884541‑3884819 | cggcggCGATAGTACGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAGTTGGCcgat < 1:632732/150‑3 (MQ=255)cggcggCGACAGTACGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAGTTGGCcgat > 1:629028/1‑148 (MQ=255)cggcggCGACAGTACGTGACACGTGAATGGCTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCcggc > 1:1643922/1‑150 (MQ=255) ggcggcGACAGTACGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAGTTGGCcgatg < 2:629028/150‑4 (MQ=255) ggcggcGACAGTACGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCcggcg < 2:36365/150‑1 (MQ=255) ggcggcGACAGTACGGGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGAAAGAAGTGCAGGCCAGCTCTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAGTTGGCcgatg < 1:903139/150‑4 (MQ=255) cggcgACAGTACGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCggcggc < 2:1435041/150‑1 (MQ=255) cggcgACAGTACGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCggcggc < 2:1643922/150‑1 (MQ=255) ggcgACAGTACGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGgcggcg > 2:2191225/1‑150 (MQ=255) gACAGTACGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCg > 1:2088054/1‑150 (MQ=255) gTACGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCa < 1:1249617/150‑1 (MQ=255) cGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGa < 1:2039018/150‑1 (MQ=255) cGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGa < 1:1247229/150‑1 (MQ=255) gACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGAGCGTGACtt > 1:1307161/1‑150 (MQ=255) acacGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTc < 2:2088054/150‑1 (MQ=255) acGTGATCATCGCCATGGCAGGCAGGAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCCACATGGCGTTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTcaa < 1:1955479/150‑1 (MQ=255) acGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTcaa < 2:482305/150‑1 (MQ=255) acGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCATTCCACGCAGGAGAAAGTGCAGGACCGCGGGGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTcaa > 1:1499864/1‑150 (MQ=255) aTCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAAcc > 1:1092193/1‑150 (MQ=255) aaCTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAGTTGGCcgatg > 1:1585858/1‑120 (MQ=255) aaCTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAGTTGGCcgatg < 2:1585858/123‑4 (MQ=255) aCTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCAt < 2:692366/133‑1 (MQ=255) aCTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCAt > 1:692366/1‑133 (MQ=255) tCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCa > 1:1193591/1‑150 (MQ=255) ggCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGc < 2:1619481/150‑1 (MQ=255) gCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCa > 2:734967/1‑150 (MQ=255) aTGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGCCCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGAc < 1:900540/126‑1 (MQ=255) aTGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGAc > 2:900540/1‑126 (MQ=255) aTGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATc > 1:52784/1‑150 (MQ=255) tGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCa < 1:2181040/150‑1 (MQ=255) gcagcaGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAg > 1:556172/1‑150 (MQ=255) cagcagCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGc < 2:2146008/150‑1 (MQ=255) agcagcGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGct < 1:1071337/150‑2 (MQ=255) agcagcGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCg > 1:1091765/1‑150 (MQ=255) cTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCaacaac < 2:939119/123‑1 (MQ=255) cTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCaacaac > 1:939119/1‑123 (MQ=255) ggACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCGAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGa < 1:58519/150‑1 (MQ=255) gACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGaa < 1:775330/150‑1 (MQ=255) aGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCg > 2:2348415/1‑136 (MQ=255) aGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCg < 1:2348415/136‑1 (MQ=255) cGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATc < 2:52784/150‑1 (MQ=255) gCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCAc < 2:930997/120‑1 (MQ=255) gCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCAc > 1:930997/1‑120 (MQ=255) gCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCa < 1:384850/150‑1 (MQ=255) ccTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAg > 2:1621708/1‑150 (MQ=255) cTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAga > 1:238003/1‑149 (MQ=255) aCGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGgcgc < 2:152758/150‑1 (MQ=255) gCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCt < 1:1223767/150‑1 (MQ=255) ggAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTgct > 1:533677/1‑149 (MQ=255) aagaagTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGcc > 2:2099489/1‑150 (MQ=255) aagTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAg < 2:2364914/150‑1 (MQ=255) aGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCa < 2:1091765/150‑1 (MQ=255) cgcgGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGAc < 2:262016/150‑1 (MQ=255) cgcgGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGAc > 1:1796409/1‑150 (MQ=255) cgcgGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTAAACAGCATCAGCGTCTGCTTTGAATTCATCTATTTTCGCCTGCGCCAAGGCCGCAGAGAc > 2:2202116/1‑150 (MQ=255) gTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGa > 1:890489/1‑150 (MQ=255) ttCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAgcggc > 1:1930573/1‑118 (MQ=255) ttCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAgcggc < 2:1930573/118‑1 (MQ=255) ttCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGAt > 2:2167517/1‑150 (MQ=255) ttCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGAt > 1:1485929/1‑150 (MQ=255) ttCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTACGCCAAGGCCGCAGCGAAGGCCTGGAt > 1:500598/1‑150 (MQ=255) cccGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCg < 2:2114383/150‑1 (MQ=255) ccGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGt < 1:1526748/150‑1 (MQ=255) cGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGtt > 2:2328501/1‑150 (MQ=255) tGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCtg > 2:819494/1‑150 (MQ=255) aGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCa > 2:493442/1‑150 (MQ=255) aGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCa > 1:167770/1‑150 (MQ=255) aGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCa > 1:1191672/1‑150 (MQ=255) ggCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCAt < 2:1927201/150‑1 (MQ=255) ggCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCAt < 2:1499864/150‑1 (MQ=255) cACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATgg < 1:2191225/150‑1 (MQ=255) cACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATgg < 2:1191672/150‑1 (MQ=255) gCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATGGGcc > 1:1693523/1‑150 (MQ=255) aaGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACgg < 1:235700/122‑1 (MQ=255) aaGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACgg > 2:235700/1‑122 (MQ=255) gATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATGGGCCGCGa > 2:1377866/1‑150 (MQ=255) gATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATGGGCCGCGa > 2:2049802/1‑150 (MQ=255) aTGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATGGGCCGCGAg < 2:1796409/150‑1 (MQ=255) aTGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATGGGCCGCGAg < 2:1307161/150‑1 (MQ=255) tGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGAACTTTTTAACTCATCCATCTGGGCCGGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATGGGCCGCGAgg < 1:2099489/150‑1 (MQ=255) gAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGtt > 2:321698/1‑129 (MQ=255) gAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGtt < 1:321698/129‑1 (MQ=255) gAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATGGGCCGCGAg > 2:2314517/1‑147 (MQ=255) gAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATGGGCCGCGAg < 1:2314517/147‑1 (MQ=255) gAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATGGGCCGCGAGGcc > 1:1949803/1‑150 (MQ=255) ggCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGtt > 1:1567288/1‑127 (MQ=255) ggCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGtt < 2:1567288/127‑1 (MQ=255) gCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATGGGCCGCGAGGCCGtt < 2:401171/150‑1 (MQ=255) cgccGGCCAGTTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGaa < 1:530325/70‑1 (MQ=255) | CGGCGGCGACAGTACGTGACACGTGATCAACTCCATGGCATGCAGCAGCGCCTGGACAGCCGGCCTTCAACGCCGGAAGAAGTGCAGGACCGCGGTGAGTTCGCCCGCTGCCAGGCACGCAAGATGGAGGCCATCGGCCAACTGGCCGGCGGCGTCGCCCATGACTTCAACAACCTGCTCACCAGCATCAGCGGCAGCTTCGAACTCATCCAGCGGCGCCTGCGCCAAGGCCGCAGCGACGGCCTGGATGGCGTTCTGTGCATGGGCCGCGAGGCCGTT > NC_002947/3884541‑3884819 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |