| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,908,460 | A→G | 6.8% | N122S (AAC→AGC) | PP_3450 → | TPR repeat‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,908,460 | 0 | A | G | 6.8% | 256.3 / 6.7 | 88 | N122S (AAC→AGC) | PP_3450 | TPR repeat‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (40/42); new base G (4/2); total (44/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.55e-01 | |||||||||||
ACAGGCCAGTTGCCTGCCCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGAG > NC_002947/3908321‑3908607 | acaGGCCAGTTGCCTGCCCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCAtt < 2:1861539/150‑1 (MQ=255) aGGCCAGTTGCCTGCCCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGc > 1:110516/1‑150 (MQ=255) ggCCAGTTGCCTGCGCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGCCGCGGCTGGCCATGGCCAACCGCGCCATTGcc < 2:11100/150‑1 (MQ=255) gCCAGTTGCCTGCCCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCg > 1:1316063/1‑150 (MQ=255) gCCAGTTGCCTGCCCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGAATGTGCTGCTTGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCg > 1:1142342/1‑150 (MQ=255) ctgccCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGccacc > 1:2077053/1‑150 (MQ=255) tgccCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGccacca > 2:1509465/1‑150 (MQ=255) cccAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGTAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGccaccacc > 1:2008389/1‑150 (MQ=255) ccAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGccaccacca < 2:110516/150‑1 (MQ=255) ccAGGACTGGCAACGCCCGGCCAATGGCTATATCCAGCAATTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGccaccacca < 1:2221566/150‑1 (MQ=255) gACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGACAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCACAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACcagcag < 2:1737292/150‑1 (MQ=255) tGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGcc > 2:2267076/1‑150 (MQ=255) gCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCa > 1:628806/1‑150 (MQ=255) aaCGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGccaccacca > 2:478285/1‑139 (MQ=255) aaCGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGccaccacca < 1:478285/139‑1 (MQ=255) aaCGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAAc > 2:1675202/1‑150 (MQ=255) gCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgct > 2:640847/1‑150 (MQ=255) gCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgct < 1:2251533/150‑1 (MQ=255) gCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAAGGCCTGACTGCGCTGCTGGCCCGCGCCCCCTCCCCGGCCGCGCCTAACAGCTCTCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgct > 1:782269/1‑150 (MQ=255) ccTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgcgg < 2:628806/150‑3 (MQ=255) cTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCgcgc < 1:784210/113‑1 (MQ=255) cTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCgcgc > 2:784210/1‑113 (MQ=255) cTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgctgg < 1:39443/150‑1 (MQ=255) cTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgctgg < 2:1316063/150‑1 (MQ=255) cTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGACCACGCCCCCTCCAAACAATCGCGCAGCCGGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgctgg > 1:1497026/1‑150 (MQ=255) gCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgctggctg < 2:261508/150‑1 (MQ=255) ccAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGc > 1:178010/1‑150 (MQ=255) aaTGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAg < 1:1778028/150‑1 (MQ=255) tGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGGCTACCTCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTc < 2:2392881/150‑1 (MQ=255) tCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGc < 1:2138596/150‑1 (MQ=255) ccAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCGCGCCGCGGCACACCAGACGAGGCTAGCCGTGGCCAACCGCGCCAGCGCCGTCGGCCACCTCCAGCAGGCCCTACGCTGGCTGCCTTTGCTACCGcc > 2:175825/1‑150 (MQ=255) ccAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGcc < 1:640847/150‑1 (MQ=255) cAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGAt < 1:1675202/150‑1 (MQ=255) gTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGTTGGCCATGGCCAGCcgc > 1:694728/1‑87 (MQ=255) gTCGACGAAAAGGGCCGGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGTTGGCCATGGCCAGCcgc < 2:694728/87‑1 (MQ=39) gacgaAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTg > 2:506149/1‑150 (MQ=255) cgaAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTgca < 2:2077053/150‑1 (MQ=255) gaAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTgcag > 2:1155153/1‑150 (MQ=255) aaaGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCa > 1:229466/1‑123 (MQ=255) aaaGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCa < 2:229466/123‑1 (MQ=255) gCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCg > 1:614865/1‑150 (MQ=255) gACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGagca < 1:927333/150‑1 (MQ=255) cTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGagcagc < 1:954490/150‑1 (MQ=255) tGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCa < 2:988675/111‑1 (MQ=255) tGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCa > 1:988675/1‑111 (MQ=255) tGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGACATTGCCGTCGGCCACCACAAGCGGAATGCAGGCATGCGGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAgcg > 2:63569/1‑150 (MQ=255) ctgctgGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAg < 1:1877905/150‑1 (MQ=255) ctgGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCACGCCCAACGCTGGCTGCAGCCGCCACCGCCTGACCAACCGCAGCAACCCGAGCAGCGCCCGCaa > 2:249877/1‑150 (MQ=255) tgGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAAc > 2:1985518/1‑150 (MQ=255) gCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGGTCAACTGCAGCAACCCGAGCAGCGCCAGCAACtt < 2:1425772/150‑1 (MQ=255) ccACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTg < 1:1960803/150‑1 (MQ=255) ccACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTg < 2:1142342/150‑1 (MQ=255) ccACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTg > 2:1960803/1‑150 (MQ=255) ccACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTg > 1:1924283/1‑150 (MQ=255) cACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTgg < 2:31081/150‑1 (MQ=255) aCGCCCCCTCCCCCGCAGCGTCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGc > 1:292189/1‑150 (MQ=255) aCGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGagc > 2:470473/1‑132 (MQ=255) aCGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGagc < 1:470473/132‑1 (MQ=255) aCGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGc > 1:1924597/1‑150 (MQ=255) aCGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGc > 2:2302323/1‑150 (MQ=255) ccccTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgctgg > 1:2333813/1‑88 (MQ=255) ccccTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgctgg < 2:2333813/88‑1 (MQ=255) tCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGcc > 1:2384772/1‑150 (MQ=255) tCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGcc > 2:2370654/1‑150 (MQ=255) ccGCAGCGGCCAACCAGCCGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCcgcg < 1:819041/150‑1 (MQ=255) gCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGc < 2:1924283/150‑1 (MQ=255) ccAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGcgacg < 1:1509465/150‑1 (MQ=255) cAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCTGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGcgacga > 2:1748237/1‑150 (MQ=255) aatggcgcgGTTGGCCATGGCCAGCCGCGTCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGc > 2:1282418/6‑150 (MQ=255) gcgGTTGGCCATGGCCAGCCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGagca < 1:1030388/102‑1 (MQ=255) gcgGTTGGCCATGGCCAGCCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGagca > 2:1030388/1‑102 (MQ=255) cgGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTg < 2:782269/150‑1 (MQ=255) gCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGt < 1:1985518/150‑1 (MQ=255) cTGGCCATGGCCAACCGGGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTg > 2:1235410/1‑150 (MQ=255) tggccatggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTgc < 2:1497026/150‑1 (MQ=255) ggccatggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTgcg < 1:1155153/150‑1 (MQ=255) gccatggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTgcgg > 1:1247802/1‑150 (MQ=255) ccatggccaGCCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAACGCCAGCAACTTTGGCATCGTGCCCGCGAAGTCGACGATGCAGCGCTGGTccgga > 2:1600148/1‑149 (MQ=255) catggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACttt > 2:1385378/1‑107 (MQ=255) catggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACttt < 1:1385378/107‑1 (MQ=255) catggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTgcggc < 1:821001/149‑1 (MQ=255) catggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTgcggc > 2:821001/1‑149 (MQ=255) atggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGgcgc < 1:1235410/150‑1 (MQ=255) ccaACCGCGCCATTGCCGTTGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGa < 1:406907/150‑1 (MQ=255) ccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGa < 2:1924597/150‑1 (MQ=255) ccaACCGCGCCATTGCCGGCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCTCCAGCAACTTTGGCAACTGTCCCGCGAAGACGACAATGCAGCGCTGGTGCGGCGCCTGa > 2:496993/1‑150 (MQ=255) caACCGCGCCATTGCCGTCGGCCACCCCCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGAg < 1:249877/150‑1 (MQ=255) caACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGACCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGAg > 1:1465974/1‑150 (MQ=255) | ACAGGCCAGTTGCCTGCCCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCTGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGAG > NC_002947/3908321‑3908607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |