| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,002,533 | T→C | 8.9% | Y225H (TAC→CAC) | allE → | S‑ureidoglycine aminohydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,002,533 | 0 | T | C | 8.9% | 282.3 / 13.4 | 103 | Y225H (TAC→CAC) | allE | S‑ureidoglycine aminohydrolase |
| Reads supporting (aligned to +/- strand): ref base T (53/40); new base C (4/5); total (58/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.84e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
GAAAACCACCCGTTTTGTCGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCT > NC_002947/4002388‑4002681 | gAAAACCACCCGTTTTGTCGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGTGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCg > 1:1373715/1‑150 (MQ=255) aaaaCCACCCGTTTTGTCGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGc < 2:1645424/150‑1 (MQ=255) accaccCGTTTTGTCGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTACACCGCCtt < 2:1738005/150‑2 (MQ=255) ccaccCGTTTTGTCGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGgtgt > 1:386818/1‑141 (MQ=255) ccaccCGTTTTGTCGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGgtgt < 2:386818/141‑1 (MQ=255) ccaccCGTTTTGTCGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTACACCGCCttg < 2:1350682/150‑3 (MQ=255) accCGTTTTGTCGACATGGCCGACCTGCGCCACGACAGGCACGTGAACATCGTCACCTTCCAGCCGGGCGGCGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGGACGTGCGGGAAGGCAAGGCGGTGTACCGCCTGAAc > 1:1507073/1‑150 (MQ=255) cccGTTTTGTCGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTACGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAAcc > 1:1217566/1‑150 (MQ=255) cGTTTTGTCGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACTTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAg > 2:1160855/1‑150 (MQ=255) gTCGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTg < 1:647207/149‑1 (MQ=255) gTCGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTg > 2:647207/1‑149 (MQ=255) cGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGt < 2:1217566/150‑1 (MQ=255) gACATGGCCGACATTCGCCACGACATGCACGTGAACATCGGCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGAAGTACCGCCTGAACCAGGACTGCGTc > 1:2300291/1‑150 (MQ=255) gACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTAGGTGCTGGAAGGCAAGGCGGTGAACCGCCTGAACCAGGACTGGGTc > 1:775746/1‑150 (MQ=255) aCATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCg > 2:382389/1‑150 (MQ=255) ccACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGaa > 1:943576/1‑142 (MQ=255) ccACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGa > 2:1904312/1‑150 (MQ=255) tGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCAtgt > 1:1045237/1‑150 (MQ=255) gTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTg > 1:1694782/1‑150 (MQ=255) gTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTg > 2:2227372/1‑150 (MQ=255) gTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTg > 2:1550715/1‑150 (MQ=255) cATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTACACCGCCtt > 2:1770930/1‑99 (MQ=255) cATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTACACCGCCtt < 1:1770930/100‑2 (MQ=255) aTCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGcc > 2:2368457/1‑150 (MQ=255) tCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTgg > 2:1298458/1‑107 (MQ=255) tCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTgg < 1:1298458/107‑1 (MQ=255) tCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCt > 1:1981701/1‑150 (MQ=255) tCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCAGGGTACCCCCTCAACCAGTACTCGGTCGAAGTGGAAGCCGGCCACTTCCTGCGGCTGCCCGCAttgc > 2:747344/1‑148 (MQ=255) tCACATTCCAGCCGGGCGGTGTGATTCCGTTCGTAAAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACGAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCt < 1:707678/150‑1 (MQ=255) cTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGccc > 1:186121/1‑150 (MQ=255) ttCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGaa > 2:698139/1‑114 (MQ=255) ttCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGaa < 1:698139/114‑1 (MQ=255) ttCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCg > 2:1088208/1‑150 (MQ=255) gCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGccc < 2:1612671/144‑1 (MQ=255) gCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGccc > 1:1612671/1‑144 (MQ=255) gCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCG‑‑GTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCt > 1:1626609/1‑150 (MQ=255) tgtgATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGc > 2:2122605/1‑150 (MQ=255) gtgATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTAGCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACggc < 2:1686810/150‑3 (MQ=255) aTTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCcggc > 2:2003872/1‑150 (MQ=255) ttCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGc < 2:1081788/136‑1 (MQ=255) ttCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGc > 1:1081788/1‑136 (MQ=255) ttCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCcggcg < 2:1373715/150‑1 (MQ=255) tCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGGCTAGGTCGAAGTGGAAGCCCCCGACGCTATCTGTCTTGGCTCCTTCTGCCCGCAAGCCTGCTACGCcggcgg < 1:1023474/150‑1 (MQ=255) gTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGccc > 1:1656536/1‑150 (MQ=255) tCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAg < 1:382389/150‑1 (MQ=255) gCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCt < 2:715060/115‑1 (MQ=255) gCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCt > 1:715060/1‑115 (MQ=255) aGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCaa > 2:631383/1‑150 (MQ=255) aGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCaa > 1:1338693/1‑150 (MQ=255) gAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTa > 1:2227998/1‑131 (MQ=255) gAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTa < 2:2227998/131‑1 (MQ=255) aCCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACtt < 2:2052894/92‑1 (MQ=255) aCCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACtt > 1:2052894/1‑92 (MQ=255) aCCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACttt < 1:1531163/150‑1 (MQ=255) cccACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTa < 1:2227372/150‑1 (MQ=255) ccACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAg > 1:1121699/1‑150 (MQ=255) ccACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAg > 2:766527/1‑150 (MQ=255) aCGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCt > 2:1406857/1‑52 (MQ=255) aCGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCt < 1:1406857/52‑1 (MQ=255) aCGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGcc > 2:665099/1‑119 (MQ=255) aCGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGcc < 1:665099/119‑1 (MQ=255) aCGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGAGGCCCAGGCAACTTTAGCt > 2:180315/1‑150 (MQ=255) gTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTAc < 1:608865/150‑1 (MQ=255) gTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGAGGCCCAGGCAACTTTAGCTAc < 1:180315/150‑1 (MQ=255) ggAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGcc < 2:513751/104‑1 (MQ=255) ggAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGcc > 1:513751/1‑104 (MQ=255) ggAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCACGCAAACCTGCTAAGCCGGCGTCTCAGGGAACTTTAGCTACgtgct > 2:1345340/1‑150 (MQ=255) aaCACGGCCTGTACGTGCTGGAAGGCACTGCGTTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGt > 1:1642866/1‑150 (MQ=255) aaCACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGt > 1:179800/1‑150 (MQ=255) acacGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTa > 1:135437/1‑150 (MQ=255) acacGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTa < 1:766527/150‑1 (MQ=255) cGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACaa < 2:1694782/150‑1 (MQ=255) cGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACaa < 1:2122605/150‑1 (MQ=255) cagTACGTGCTGGACCGCAACGCGGTTTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGAc < 2:1121699/148‑1 (MQ=255) cTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCt > 2:2395708/1‑88 (MQ=255) cTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCt < 1:2395708/88‑1 (MQ=255) gTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGAGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGt < 2:1045237/150‑1 (MQ=255) tACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTg > 2:681242/1‑150 (MQ=255) tACGTGCTGGAAGGCAAGGCG‑‑GTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGaa < 2:1626609/150‑1 (MQ=255) cGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGAc > 2:865439/1‑145 (MQ=255) cGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGAc < 1:865439/145‑1 (MQ=255) cGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGaa < 1:1160855/150‑1 (MQ=255) tGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCcgg > 2:1603102/1‑106 (MQ=255) tGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCcgg < 1:1603102/106‑1 (MQ=255) tGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAAcc > 2:627585/1‑150 (MQ=255) cTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCACACCAGTCACGTAAGCGTGCTACGCCGGCGGCGCAGGCACCTTTCGCTACCTGCTGTACAAGGACGTGAACCGt > 1:1251057/1‑150 (MQ=255) tGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTc > 2:1159905/1‑150 (MQ=255) ggAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGa > 2:182790/1‑138 (MQ=255) ggAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGa < 1:182790/138‑1 (MQ=255) ggAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGAc < 2:903580/139‑1 (MQ=255) ggAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGAc > 1:903580/1‑139 (MQ=255) ggAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCa > 2:1967174/1‑150 (MQ=255) ggttcaggcGGTACACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGt > 1:1822275/6‑150 (MQ=255) aggcaaggcGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGt > 1:1170320/1‑150 (MQ=255) gttcaggcGGTACACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGAc < 1:4027/131‑1 (MQ=255) gttcaggcGGTACACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGAc > 2:4027/5‑135 (MQ=255) ttcaggcGGTACACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTac > 1:1635558/4‑150 (MQ=255) caaggcGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTaca < 2:186121/150‑1 (MQ=255) cGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGa < 2:1507073/150‑1 (MQ=255) gtACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCt < 2:919919/150‑1 (MQ=255) | GAAAACCACCCGTTTTGTCGACATGGCCGACATGCGCCACGACATGCACGTGAACATCGTCACCTTCCAGCCGGGCGGTGTGATTCCGTTCGCAGAAACCCACGTGATGGAACACGGCCTGTACGTGCTGGAAGGCAAGGCGGTGTACCGCCTGAACCAGGACTGGGTCGAAGTGGAAGCCGGCGACTTCATGTGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCT > NC_002947/4002388‑4002681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |