| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,002,728 | C→T | 8.7% | intergenic (+31/‑59) | allE → / → PP_3531 | S‑ureidoglycine aminohydrolase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,002,728 | 0 | C | T | 8.7% | 324.4 / 15.7 | 115 | intergenic (+31/‑59) | allE/PP_3531 | S‑ureidoglycine aminohydrolase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (56/48); new base T (5/5); total (62/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
GCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGACTGGCGCCTGGCCTACGACCGCGAAGGCA > NC_002947/4002583‑4002877 | gCTGCGCGCCTTCTGCCCGCAACCCCGCTACGCCGGCGGCCCAGGGAACTTTAGCTACCTGCTGTACAAGTACGTGATCCGTCACGTACTCCTGACGATG‑ATCCCCAAGCGCTAAGCCCAGGCCGATGCCCGCA‑AGCCCGCCAACCTGGc < 1:747344/150‑1 (MQ=255) tGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCgg > 2:1932388/1‑150 (MQ=255) gcgcgcCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCggg > 2:2150375/1‑150 (MQ=255) cgcgcCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGc < 1:822985/150‑1 (MQ=255) gcgcCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCt < 2:1338693/150‑1 (MQ=255) gcCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCttt < 2:135437/150‑1 (MQ=255) ccTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTc < 2:1656536/150‑1 (MQ=255) ccTTCTGACCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGCCGGTGCAACCACGA‑CGTGAAGCGCATCCGGATGCTCGCA‑AGCCCTCCAGGTTGGCGGGCttgc > 2:2330244/1‑148 (MQ=255) cTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAGGTTGGCGGGCttgcg < 1:2330244/150‑4 (MQ=255) ttCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAGGTTGGCGGGCttgcgg < 2:1251057/150‑5 (MQ=255) ttCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTg > 1:1528814/1‑150 (MQ=255) cTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGtt < 2:179764/150‑1 (MQ=255) cTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAACGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGtt < 1:1345340/150‑1 (MQ=255) cccGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATTCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGc > 1:21882/1‑150 (MQ=255) gCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCAAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCcgc < 1:1159905/150‑1 (MQ=255) aGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGCCACTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCa < 1:1967174/150‑1 (MQ=255) ccTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGAA‑AGCCCGCCAACCTGGCGGGCTTTCTGtt > 2:804211/1‑139 (MQ=255) aCGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGaaa < 2:2162812/150‑1 (MQ=255) gCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATa < 2:179800/150‑1 (MQ=255) cggcCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATacccac < 2:2226168/150‑1 (MQ=255) ggcCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATacccacc < 1:1088208/150‑1 (MQ=255) cccAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCt > 2:2185812/1‑150 (MQ=255) gCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAg < 1:681242/150‑1 (MQ=255) aaCTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAggg > 1:558482/1‑150 (MQ=255) cTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTa > 2:1414124/1‑150 (MQ=255) tttAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTc > 1:2085296/1‑109 (MQ=255) tttAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTc < 2:2085296/109‑1 (MQ=255) tttAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTAc > 2:654209/1‑150 (MQ=255) cTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGcc > 2:559730/1‑150 (MQ=255) cTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGATAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCGTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGcc > 2:175891/1‑150 (MQ=255) tACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCa < 1:2368457/150‑1 (MQ=255) aCCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAGGTTGGCGGGCttgcgg > 2:180484/1‑100 (MQ=38) aCCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAGGTTGGCGGGCttgcgg < 1:180484/104‑5 (MQ=38) ccTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATg > 2:117795/1‑150 (MQ=255) ccTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATg > 1:1391644/1‑150 (MQ=255) tgctgTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAGGTTGGCGGGCttgc > 2:2128750/1‑97 (MQ=39) ctgTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCt < 1:2071003/94‑1 (MQ=255) ctgTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCt > 2:2071003/1‑94 (MQ=255) tACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGct > 2:1385831/1‑150 (MQ=255) tACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGAA‑AGCCCGCCAGGTTGGCGGGCttgcgg < 2:1369219/96‑5 (MQ=37) aaGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAg < 1:945819/127‑1 (MQ=255) gACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGctgcctgc < 2:1391644/150‑1 (MQ=255) gTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGCAG‑CAGCACATCCCGCCAGCAGATGTTGCTGTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCtgctgc > 1:1498988/1‑150 (MQ=255) ccGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAg < 1:159864/116‑1 (MQ=255) ccGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAg > 2:159864/1‑116 (MQ=255) cGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTg < 1:887617/150‑1 (MQ=255) gTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGc > 1:1492346/1‑150 (MQ=255) tCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCa > 2:1722981/1‑124 (MQ=255) tCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCa < 1:1722981/124‑1 (MQ=255) gTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTtgc > 2:259872/1‑150 (MQ=255) gTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCACGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCTTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTtgc > 1:1945152/1‑150 (MQ=255) acCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGctg < 1:683073/126‑1 (MQ=255) acCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTgctgct > 1:1427131/1‑150 (MQ=255) cTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCtgt < 1:117795/150‑1 (MQ=255) cTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCtgt > 2:1008797/1‑150 (MQ=255) cTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCtgt > 1:906784/1‑150 (MQ=255) cTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AACCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGACCATGAACCGCTGCCTGCTGCTCGCTCCCTTgctgctat > 2:1761852/1‑148 (MQ=255) tGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGttt < 2:1914219/71‑1 (MQ=255) tGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGttt > 1:1914219/1‑71 (MQ=255) tGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCAt > 2:744188/1‑114 (MQ=255) tGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCAt < 1:744188/114‑1 (MQ=255) tGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGAGTCTCCTTGAATACCCACCCTTGCAGGGTACCGGCCATGAAACGCTGCCTGGTGCTTCCTTCCTGGCTTCtgtg > 1:1133701/1‑150 (MQ=255) gACGCTG‑AACCCCACGACCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGc < 2:558482/150‑1 (MQ=255) gACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGc > 1:479582/1‑150 (MQ=255) aCGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAgg < 1:1899612/101‑1 (MQ=255) gCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCAcc > 1:1898281/1‑150 (MQ=255) cTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACct < 1:259872/150‑1 (MQ=255) tG‑AACCCCAAGCTCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCt > 2:1899974/1‑61 (MQ=255) tG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCt < 1:1899974/61‑1 (MQ=255) tG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCAGTCAACCTAGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACctc > 2:1892412/1‑150 (MQ=255) aCCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGc < 1:627585/150‑1 (MQ=255) cccAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGACAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGccc > 1:1947051/1‑150 (MQ=255) ccAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCt > 2:1420595/1‑150 (MQ=255) aaGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTgg < 1:1385831/150‑1 (MQ=255) gcTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGgccgc < 2:1427131/150‑1 (MQ=255) gcTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGgccgc > 2:1249563/1‑150 (MQ=255) cTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGcc < 2:698626/141‑1 (MQ=255) cTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGcc > 1:698626/1‑141 (MQ=255) tAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGATGGTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGccgccg > 1:22668/1‑150 (MQ=255) aGCCCAGGCTGATGCCCGCA‑AGCCCGCCACCCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGAt < 2:1498988/150‑1 (MQ=255) cccAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGa > 1:2139672/1‑150 (MQ=255) ccAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGAc < 2:1898281/150‑1 (MQ=255) ccAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGAc > 2:1869923/1‑150 (MQ=255) cAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCa < 2:299537/75‑1 (MQ=255) cAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCa > 1:299537/1‑75 (MQ=255) aGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTTTTTGCCGCGCATACt < 2:908514/56‑1 (MQ=255) aGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTTTTTGCCGCGCATACt > 1:908514/1‑56 (MQ=255) ggCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGACTgg > 1:2198123/1‑150 (MQ=255) tGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAg < 2:2203273/71‑1 (MQ=255) tGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAg > 1:2203273/1‑71 (MQ=255) aTGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGACTGGCGCCt < 2:2139672/150‑1 (MQ=255) tGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCCGACTCCCCAGCCTACTGAAAGGCCCACCCTTGCAGGGAAACCGCTATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGACTGGCGCCTg < 1:541219/150‑1 (MQ=255) ccGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGACTGGCGCCTGGcc > 2:684297/1‑150 (MQ=255) ccGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGACTGGCGCCTGGcc > 1:688472/1‑150 (MQ=255) agaa‑aGCCCGCCAGGTTGGCGGGCTTGCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGACTGGCGCCTGGCCt > 1:1321271/4‑150 (MQ=255) gCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGACTGGCGCCTGGCCTACGAc > 2:2104130/1‑150 (MQ=255) ccGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAACTACCCACCCTTGCAGGGTACCGGACATGAACCGCTTCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGACTGGCGCCTGGCCTACGACcg > 2:847730/1‑150 (MQ=255) ccGCCAACCTGGCGGGCTCTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGACTGGCGCCTGGCCCACGACcg > 1:104371/1‑150 (MQ=255) cgcgAACCTTGCGGGCTCTCGGTTTGCCCCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTCCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCCCCGGTGACTGCCGCCTGGCCTACGACagc > 2:1757495/1‑150 (MQ=255) cTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGACTGGCGCCTGGCCTAAGACCGCGAAGGCa > 2:1339625/1‑150 (MQ=255) | GCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCAGGCAACTTTAGCTACCTGCTGTACAAGGACGTGAACCGTCACGTACACCTGACGCTG‑AACCCCAAGCGCTAAGCCCAGGCTGATGCCCGCA‑AGCCCGCCAACCTGGCGGGCTTTCTGTTTGCCGCGCATACTGAAATACCCACCCTTGCAGGGTACCGGCCATGAACCGCTGCCTGCTGCTCGCTGCCTTGCTGCTGTGCACCTCTGCCCTGGCCGCCGATGACTGGCGCCTGGCCTACGACCGCGAAGGCA > NC_002947/4002583‑4002877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |