| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,008,805 | A→C | 6.2% | I137S (ATC→AGC) | PP_3536 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,008,805 | 0 | A | C | 6.2% | 240.6 / 6.2 | 82 | I137S (ATC→AGC) | PP_3536 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (30/46); new base C (2/3); total (33/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.91e-01 | |||||||||||
TCGCGGGGGAAAGTATATCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGTCTGTAAGATCTGCTTTGGCGTGTCTG > NC_002947/4008661‑4008954 | tcGCGGGGGAAAGTATATCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGGTCTTg > 1:1390878/1‑150 (MQ=255) cgcgGGGGAAAGTATATCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGa < 2:1545378/150‑1 (MQ=255) gcgGGGGAAAGTATATCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGAt < 1:1809821/150‑1 (MQ=255) cgGGGGAAAGTATATCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGATCGACGCTCTTGagc < 1:1421711/150‑3 (MQ=255) cgGGGGAAAGTATATCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCATATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGAtt < 2:2276665/150‑1 (MQ=255) gggggAAAGTATATATATTGTCATTCTCAATCACATTTTTTTCCTCGCTGAGGTCCTTGACTGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGAttt < 2:265897/150‑1 (MQ=255) tgAAAGTATATCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGaa < 1:1307530/149‑1 (MQ=255) ggAAAGTATATCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGaa < 1:1288123/150‑1 (MQ=255) gAAAGGATATTTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTCGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTTTAGATCAAGAGTTTTGATCATGATTTGAAg > 2:2117924/1‑150 (MQ=255) gTATATCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGcc < 1:1147534/150‑1 (MQ=255) tataTCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCt > 2:1590349/1‑150 (MQ=255) atatCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTc < 2:1009249/150‑1 (MQ=255) tCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCAc > 1:1876647/1‑150 (MQ=255) tAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCt > 1:121299/1‑150 (MQ=255) tGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAg < 2:1405741/150‑1 (MQ=255) tGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAg > 2:1193871/1‑150 (MQ=255) tATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAgc < 1:1618572/135‑1 (MQ=255) tATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAgc > 2:1618572/1‑135 (MQ=255) cTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGgaga < 1:1136000/150‑1 (MQ=255) aGCATCATCTTTATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGActc < 1:463820/150‑1 (MQ=255) catcatCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTg < 2:2043784/150‑1 (MQ=255) catcatCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTg > 2:1812949/1‑150 (MQ=255) atcatcTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTgg < 1:356333/150‑1 (MQ=255) tcatcTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGgt < 1:2009135/150‑1 (MQ=255) ttCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGATCGACGCTCTTGa > 2:1039534/1‑110 (MQ=255) ttCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGATCGACGCTCTTGa < 1:1039534/110‑1 (MQ=255) ttCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGtctc < 1:1635640/150‑1 (MQ=255) gcTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCaa > 1:506448/1‑150 (MQ=255) gcTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCaa < 2:1876647/150‑1 (MQ=255) gggCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAg < 1:471842/103‑1 (MQ=255) gggCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAg > 2:471842/1‑103 (MQ=255) gggCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCAt < 2:58076/150‑1 (MQ=255) ccTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAg < 1:1590349/150‑1 (MQ=255) tGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGc < 2:1827871/150‑1 (MQ=255) ggCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACt > 2:1009406/1‑150 (MQ=255) ttGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGATCGACGCTCTTGagc > 2:901871/1‑83 (MQ=255) ttGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGATCGACGCTCTTGagc < 1:901871/85‑3 (MQ=255) gAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGga < 2:2171225/107‑1 (MQ=255) gAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGga > 1:2171225/1‑107 (MQ=255) gAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGcaa < 1:2357553/150‑1 (MQ=255) gAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGaaa > 1:925350/1‑150 (MQ=255) gAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGaaa < 1:2155315/150‑1 (MQ=255) gAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTAGTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGaaa < 1:538133/150‑1 (MQ=255) gACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGa < 1:1259360/150‑1 (MQ=255) gACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGa < 2:121299/150‑1 (MQ=255) gACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGa < 1:1009406/150‑1 (MQ=255) cTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTTACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATAc < 2:1646264/150‑1 (MQ=255) tCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACtt < 2:833100/135‑1 (MQ=255) tCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACtt > 1:833100/1‑135 (MQ=255) cGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAAc > 2:630528/1‑150 (MQ=255) gagaTTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGa < 1:1596461/63‑1 (MQ=255) gagaTTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGa > 2:1596461/1‑63 (MQ=255) tATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCa > 1:1199357/1‑150 (MQ=255) tCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGca < 2:2212695/114‑1 (MQ=255) tCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGca > 1:2212695/1‑114 (MQ=255) tCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACg > 2:929569/1‑150 (MQ=255) gCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACggg > 2:995381/1‑150 (MQ=255) cTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGc < 2:506448/150‑1 (MQ=255) cTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGa > 1:1758256/1‑118 (MQ=255) cTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGa < 2:1758256/118‑1 (MQ=255) aCGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGtc > 2:1605862/1‑80 (MQ=255) aCGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGtc < 1:1605862/80‑1 (MQ=255) tATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTcaca > 2:2184721/1‑150 (MQ=255) ttGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGa < 2:533815/108‑1 (MQ=255) ttGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGa > 1:533815/1‑108 (MQ=255) gACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAg > 1:804459/1‑147 (MQ=255) gACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAg < 2:804459/147‑1 (MQ=255) cGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGTCt < 1:1193871/150‑1 (MQ=255) gggCCTGTCGCTCAAGAGCGTCGATCTTTATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGTCTg < 1:1812949/150‑1 (MQ=255) ccTGTCGCTCAAGATGATCGATCTTGATTTGACGCGCCTCCACCTCAGCTAGAGACTCTGGTGTCTCAGGCTCCAAATCCTGCGGCACACTTCAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACACGGTCTGTaa < 2:1199357/150‑1 (MQ=255) tGTCGCTCAAGAGCGTCGATCTTGATTTGCAGCGCATCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGTCTGTAAGa > 1:2268872/1‑150 (MQ=255) gCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGaaa < 1:2252226/90‑1 (MQ=255) gCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGaaa > 2:2252226/1‑90 (MQ=255) aaGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGTCTGTAAGATCTGCttt > 1:2260984/1‑150 (MQ=255) aaGAGCGGCGATCTTGATTTGAATCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGTTCCAAGTCATGAGGCACACTTGACTTAGCTCCAGTCCTCAACCCTCGCGACGGGCCACACTCACTCACAGGGCCTGTAAGATCTGCctt < 2:695396/150‑1 (MQ=255) agagCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGTCTGTAAGATCTGCTTTg < 1:630528/150‑1 (MQ=255) agagCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTAGAGACTCTCGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGTCTGTAAGATCTGCTTTg < 1:2069766/150‑1 (MQ=255) gagCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGAt < 2:180800/89‑1 (MQ=255) gagCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGAt > 1:180800/1‑89 (MQ=255) gTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGTCTGTAAGATCTGCTTTGGCgtg > 1:1605661/1‑150 (MQ=255) cGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGTCTGTAAGATCTGCTTTGGCGTGTc < 2:1390878/150‑1 (MQ=255) gATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGTCTGTAAGATCTGCTTTGGCGTGTCt > 1:849878/1‑150 (MQ=255) aTCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGt < 2:38952/124‑1 (MQ=255) aTCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGt > 1:1996035/1‑124 (MQ=255) aTCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGt > 1:38952/1‑124 (MQ=255) aTCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGt < 2:1996035/124‑1 (MQ=255) aTCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGTCTGTAAGATCTGCTTTGGCGTGTCTg < 1:2184721/150‑1 (MQ=255) | TCGCGGGGGAAAGTATATCTAATGTATTTCTGAGCATCATCTTCATCGGCGCTGAGGGCCTGGACGGCTTGAACGACCTCGTCCAAACGAGATTCTATCGCTGGATCTAACGCGTATTGACGGGCCTGTCGCTCAAGAGCGTCGATCTTGATTTGAAGCGCCTCCACCTCAGCTGGAGACTCTGGTGTCTCAGGCTCCAAGTCATGAGGCACACTTGAAATAGATACATTCCTCAACTCGCCCCACGGGCCCCACTCACTCACAGGGTCTGTAAGATCTGCTTTGGCGTGTCTG > NC_002947/4008661‑4008954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |