Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,025,169 C→T 9.7% V192M (GTG→ATG) ‡ emrA ← multidrug transporter membrane fusion protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,025,1690CT 9.7% 195.6 / 10.7 73V192M (GTG→ATG) ‡emrAmultidrug transporter membrane fusion protein
Reads supporting (aligned to +/- strand):  ref base C (36/29);  new base T (2/5);  total (39/34)
Fisher's exact test for biased strand distribution p-value = 2.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.21e-01

CCCGGCTGCAGGCGCTGGCCCAACTGGACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGTTGAA  >  NC_002947/4025024‑4025316
                                                                                                                                                 |                                                                                                                                                   
cccGGCTGCAGGCGCTGGCCCAACTGGACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGgtg                                                                                                                                                 <  1:1336388/150‑1 (MQ=255)
cccGGCTGCAGGCGCTGGCCCAACTGGACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGgtg                                                                                                                                                 >  2:1993467/1‑150 (MQ=255)
  cGGCTGCAGGCGCTGGCCCAACTGGACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTgtc                                                                                                                                               <  1:1356744/150‑1 (MQ=255)
   ggCTGCAGGCGCTGGCCCAACTGGACGGTACGATTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGCAACCACGGTgtcg                                                                                                                                              >  1:2175229/1‑150 (MQ=255)
     cTGCAGGCGCTGGCCCAACTGGACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCGTGGTgtcctc                                                                                                                                            <  1:605992/150‑1 (MQ=255)
     cTGCAGGCGCTGGCCCAACTGGACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGACGACACCGTGGTgtcctc                                                                                                                                            <  2:2274490/150‑1 (MQ=255)
     cTGCAGGCGCTGGCCCAACTGGACGGTACGCTTGGCGACGTAGCCGGTCACCGGCGCGACCAACGTGGTGCGGGCGTGCTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTgtcgtc                                                                                                                                            <  2:1817711/150‑1 (MQ=255)
     cTGCAGGCGCTGGCCCAACTGGACGGTACGCTTGGAAGTGGAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGACGACACCGTGGTgtcctc                                                                                                                                            <  1:1331467/150‑1 (MQ=255)
       gCAGGCGCTGGCCCAACTGGACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGa                                                                                                                                          <  2:1986809/150‑1 (MQ=255)
         aGGCGCTGGCCCAACTGGACGGTACGCTTGACGCCGTAGCCGGTGACCCGCGCGACTAACGTCGGACGGGCGAGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGGCATGACATCGGGGTGCGAGGACACCACGGTTTCGTTGAcc                                                                                                                                        >  1:973925/1‑150 (MQ=255)
          ggCGCTGGACCTACTGGAGGTTACGCGTGGCTACGTAGCCGTTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGGGGTTGGCTTGGCGCTTGTCGGCCGCTGCAGCCATGACAGCGGTGTGCGTGGACTCCACGGTGTCGTAGCCCa                                                                                                                                       <  2:969460/150‑1 (MQ=255)
               tGGCCCAACTGGACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAgcgcg                                                                                                                                  >  1:1190476/1‑150 (MQ=255)
                       cTGGACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGt                                                                                                                          <  1:2052161/150‑1 (MQ=255)
                          gACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGt                                                                                                                          <  2:2346320/147‑1 (MQ=255)
                          gACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGt                                                                                                                          >  1:2346320/1‑147 (MQ=255)
                          gACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGGCGTCGACCAGCGCGCTGCTGGTGCt                                                                                                                       <  1:1644803/150‑1 (MQ=255)
                             ggTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCATCGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAg                                                                                                                    >  2:1391522/1‑150 (MQ=255)
                                 cGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGt                                                                                                                <  1:523040/150‑1 (MQ=255)
                                  gCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGtt                                                                                                               >  1:583324/1‑150 (MQ=255)
                                  gCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGtt                                                                                                               >  1:137045/1‑150 (MQ=255)
                                      ggCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCcg                                                                                                           <  1:2143351/150‑1 (MQ=255)
                                       gCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCcgc                                                                                                          <  2:1781521/150‑1 (MQ=255)
                                         gACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCcgcgc                                                                                                        >  1:1653860/1‑150 (MQ=255)
                                         gACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGACGACACCGTGGTgtcctc                                                                                                                                            <  2:1997899/114‑1 (MQ=255)
                                         gACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGACGACACCGTGGTgtcctc                                                                                                                                            >  1:1997899/1‑111 (MQ=255)
                                               gCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGtt                                                                                                  <  2:2251354/150‑1 (MQ=255)
                                                ccGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTg                                                                                                 >  1:1713226/1‑150 (MQ=255)
                                                 cGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGa                                                                                                >  1:893807/1‑150 (MQ=255)
                                                 cGGTGACCGGCGCGACCAACGTGGTACGGGCGAGGTCGAGGTAGGACTGGCGGAGGGCGGCAGCGGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGa                                                                                                >  2:276869/1‑150 (MQ=255)
                                                     gACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGACGACACCGTGGTgtcctc                                                                                                                                            >  1:2337837/1‑99 (MQ=255)
                                                     gACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGACGACACCGTGGTgtcctc                                                                                                                                            <  2:2337837/102‑1 (MQ=255)
                                                          gcgcGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCt                                                                                       >  1:1129290/1‑150 (MQ=255)
                                                           cgcgACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTg                                                                                      <  1:1993467/150‑1 (MQ=255)
                                                             cgACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTggg                                                                                    <  2:1190476/150‑1 (MQ=255)
                                                                  aaCGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACg                                                                               >  2:2359799/1‑150 (MQ=255)
                                                                  aaCGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGAGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACg                                                                               >  1:483760/1‑150 (MQ=255)
                                                                     gtggtgCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTc                                                                            >  2:254343/1‑150 (MQ=255)
                                                                              gCGTGGTCGAGGTCGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCa                                                                   >  1:709535/1‑150 (MQ=255)
                                                                               cGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCAc                                                                  <  2:1129290/150‑1 (MQ=255)
                                                                                       aGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGACATGACATCGGGGTTCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTgg                                                          <  1:771367/150‑1 (MQ=255)
                                                                                         gTAGGCCTGGCGCAGCTCGGCAGCTGCAGTCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGa                                                        <  2:1675788/150‑1 (MQ=255)
                                                                                           aGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACa                                                      <  1:710022/150‑1 (MQ=255)
                                                                                               cTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAggctgccg                                                                   >  1:2000321/1‑127 (MQ=255)
                                                                                               cTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAggctgccg                                                                   <  2:2000321/133‑7 (MQ=255)
                                                                                                tGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGttct                                                 >  2:2409423/1‑150 (MQ=255)
                                                                                                   cgcAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTtcttct                                              <  2:1884915/150‑1 (MQ=255)
                                                                                                    gcAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTg                                             >  2:98206/1‑150 (MQ=255)
                                                                                                            gCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATc                                     >  1:1405268/1‑150 (MQ=255)
                                                                                                              aGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGc                                   >  1:431416/1‑150 (MQ=255)
                                                                                                                 tGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACa                                                      >  1:35095/1‑128 (MQ=255)
                                                                                                                 tGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACa                                                      <  2:35095/128‑1 (MQ=255)
                                                                                                                 tGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCAcc                                >  1:1752177/1‑150 (MQ=255)
                                                                                                                  gCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCg                               >  2:1661532/1‑150 (MQ=255)
                                                                                                                   cAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGtt                                                                                                  >  2:1400955/1‑82 (MQ=255)
                                                                                                                   cAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGtt                                                                                                  <  1:1400955/82‑1 (MQ=255)
                                                                                                                      ccATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGt                                                                                                                          >  2:1253812/1‑55 (MQ=255)
                                                                                                                      ccATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGt                                                                                                                          <  1:1253812/55‑1 (MQ=255)
                                                                                                                      ccATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTtcttct                                              >  2:2184777/1‑131 (MQ=255)
                                                                                                                      ccATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTtcttct                                              <  1:2184777/131‑1 (MQ=255)
                                                                                                                      ccATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGt                           >  2:392831/1‑150 (MQ=255)
                                                                                                                        aTGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTca                         >  1:1322296/1‑150 (MQ=255)
                                                                                                                         tGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTcag                        >  2:462860/1‑150 (MQ=255)
                                                                                                                          gACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTcagc                       >  2:998077/1‑150 (MQ=255)
                                                                                                                            cATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTcagcca                     <  2:431416/150‑1 (MQ=255)
                                                                                                                             aTCGGGGTGAGAGGACCCCCGGTTGGCGTGGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTcagccag                    >  2:215840/1‑150 (MQ=255)
                                                                                                                                     gCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGAAATCGCACCGCTGTCAGCCAGCACCTTgc            <  1:2246093/150‑1 (MQ=255)
                                                                                                                                      cGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTg                                                                                                    >  2:2371842/1‑61 (MQ=255)
                                                                                                                                      cGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTg                                                                                                    <  1:2371842/61‑1 (MQ=255)
                                                                                                                                       gAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCAAGCACCTTgcgc          >  2:1220126/1‑150 (MQ=255)
                                                                                                                                       gAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCATAAACAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTgcgc          >  1:2097921/1‑150 (MQ=255)
                                                                                                                                        aGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGcc         >  1:1178549/1‑150 (MQ=255)
                                                                                                                                          gACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTgcttcgg       <  2:973925/150‑6 (MQ=255)
                                                                                                                                           acacCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGt      <  1:2359799/150‑1 (MQ=255)
                                                                                                                                            caccacGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGtt     <  2:1322296/150‑1 (MQ=255)
                                                                                                                                             accacGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGttcttc                                               <  2:1982636/107‑1 (MQ=255)
                                                                                                                                             accacGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGttcttc                                               >  1:1982636/1‑107 (MQ=255)
                                                                                                                                             accacGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGTTg    >  1:522952/1‑150 (MQ=255)
                                                                                                                                             accacGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGTTg    >  1:2179478/1‑150 (MQ=255)
                                                                                                                                             accacGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGTTg    >  2:2251273/1‑150 (MQ=255)
                                                                                                                                              ccacGCTTTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGTTGa   >  2:645301/1‑150 (MQ=255)
                                                                                                                                               cacGGTGTGGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGGGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGTTGaa  >  1:1342788/1‑150 (MQ=255)
                                                                                                                                               cacGGTGTCGTCGACCAGCGGGCTGCTGGTGCTGAGCTGTTGCCGCTCGCGGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGTTGaa  <  2:483760/150‑1 (MQ=255)
                                                                                                                                               cacGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGTTGaa  <  1:254343/150‑1 (MQ=255)
                                                                                                                                               cacGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGTTGaa  <  2:709535/150‑1 (MQ=255)
                                                                                                                                               cacGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGTTGaa  <  2:893807/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
CCCGGCTGCAGGCGCTGGCCCAACTGGACGGTACGCTTGGCGACGTAGCCGGTGACCGGCGCGACCAACGTGGTGCGGGCGTGGTCGAGGTAGGCCTGGCGCAGGTCGGCAGCTGCAGCCATGACATCGGGGTGCGAGGACACCACGGTGTCGTCGACCAGCGCGCTGCTGGTGCTGAGCTGTTGCCGCGCGCTGTTGACGGCAGCCTGGGCAACGCTCAGGTCGTCACGGGCGTGGGACAGTTCTTCTGCGGCAATCGCACCGCTGTCAGCCAGCACCTTGCGCCGGTTGAA  >  NC_002947/4025024‑4025316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: