| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,042,365 | C→A | 8.4% | L137I (CTC→ATC) ‡ | PP_3563 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,042,365 | 0 | C | A | 8.4% | 284.9 / 9.6 | 92 | L137I (CTC→ATC) ‡ | PP_3563 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (41/43); new base A (4/4); total (45/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCAGCCTGTCGGGGCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTGCCGCCGCCCCGCCACTAAGCTGGAGCACAGTGCTGGCCGGG > NC_002947/4042219‑4042508 | tCAGCCTGTCGGGGCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGTTGGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCa > 1:552088/1‑150 (MQ=255)tCAGCCTGTCGGGGCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGCCACGGCCGCTGCTCa > 2:912928/1‑150 (MQ=255) aGCCTGTCGGGGCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGc < 1:566756/150‑1 (MQ=255) aGCCTGTCGGGGCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGc < 2:1487039/150‑1 (MQ=255) gCCTGTCGGGGCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCg > 1:839143/1‑150 (MQ=255) gCCTGTCGGGGCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCg < 2:1018740/150‑1 (MQ=255) gCCTGTCGGGGCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCg > 2:1322136/1‑150 (MQ=255) gCCTGTCGGGGCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCg > 1:1533220/1‑150 (MQ=255) tGTCGGGGCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGgcc > 1:1274031/1‑150 (MQ=255) ggCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTgg < 2:1234903/150‑1 (MQ=255) ggCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTgg < 1:155633/150‑1 (MQ=255) ggCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTgg > 2:719357/1‑150 (MQ=255) gCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTggg < 1:2228169/150‑1 (MQ=255) ccACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGc < 2:630489/150‑1 (MQ=255) cgcgACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGAc > 1:597096/1‑150 (MQ=255) cgcgACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATGCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGAc > 2:16824/1‑150 (MQ=255) cgACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTg < 1:854613/150‑1 (MQ=255) cgcacgcGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCa < 2:839143/150‑1 (MQ=255) cgcacgcGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCa < 2:1533220/150‑1 (MQ=255) tcgcgCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCa > 2:584073/2‑147 (MQ=255) tcgcgCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCa < 1:584073/146‑1 (MQ=255) cgccATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAggg > 2:2358127/1‑150 (MQ=255) gccATGCATGTCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGa < 1:189719/150‑1 (MQ=255) catgcatgCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACa < 1:1285887/150‑1 (MQ=255) atgcatgcCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAg > 2:2182507/1‑150 (MQ=255) tgcatgcCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGa > 2:1750308/1‑150 (MQ=255) gcatgcCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCTGCCTGGGCGACTGGCAGGCCGAGGGACAGaa > 2:2369151/1‑150 (MQ=255) gcatgcCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGaa < 1:856832/150‑1 (MQ=255) gcaagcGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGtg < 2:552088/145‑1 (MQ=255) ccATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCTGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGtgc < 2:597096/150‑1 (MQ=255) cATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGtgct > 1:199398/1‑150 (MQ=255) aTCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGtgctg > 2:2293219/1‑150 (MQ=255) gAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCag < 2:1802310/150‑1 (MQ=255) gAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCag > 2:1456737/1‑150 (MQ=255) ggAAGGATTCTGTCAGGTGGTGCTCGACCCGCAATTTGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCGCATCAGCAGCGGCGGCCTGGGCGACTGGCAGGCCTAGGGACAGAAGGTGCTGCagga < 2:338623/150‑1 (MQ=255) ggAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGc > 2:1427773/1‑115 (MQ=255) ggAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGc < 1:1427773/115‑1 (MQ=255) ggAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCagga < 1:376306/150‑1 (MQ=255) gAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCaggag < 1:2162854/150‑1 (MQ=255) gAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCaggag < 1:943397/150‑1 (MQ=255) aaGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGt < 2:46670/150‑1 (MQ=255) cgaGGTGGTGCTCGACCCGCCATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGGCTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAAcgccgc < 2:654056/148‑1 (MQ=255) ccAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCgctgct < 2:75513/87‑1 (MQ=255) ccAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCgctgct > 1:75513/1‑87 (MQ=255) aGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCcgcgc < 1:2293219/150‑1 (MQ=255) tggtgCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCa > 1:1928344/1‑150 (MQ=255) tgCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCcgcgc < 2:944862/144‑1 (MQ=255) tgCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCcgcgc > 1:944862/1‑144 (MQ=255) cTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGAGCAGCGgccgt > 1:867917/1‑86 (MQ=255) cTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGAGCAGCGgccgt < 2:867917/87‑2 (MQ=255) gACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCa < 1:78984/150‑1 (MQ=255) ccGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACgg > 1:1617612/1‑150 (MQ=255) ccGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACgg > 1:2073086/1‑150 (MQ=255) cGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGAGCAGCGgccgtgc > 1:1235963/1‑79 (MQ=38) cGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGAGCAGCGgccgtgc < 2:1235963/82‑4 (MQ=39) tcgtcgATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCaa > 2:2294895/1‑146 (MQ=255) tcgtcgATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCaa < 1:2294895/146‑1 (MQ=255) gtcgATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATgcggc > 1:1751057/1‑150 (MQ=255) tcgATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGAc < 1:757879/80‑1 (MQ=255) tcgATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGAc > 2:757879/1‑80 (MQ=255) gATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCggcggc < 2:199398/150‑1 (MQ=255) gATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCggcggc < 1:2279390/150‑1 (MQ=255) tCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGgcc < 1:1119585/63‑1 (MQ=255) tCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGgcc > 2:1119585/1‑63 (MQ=255) tCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGt < 1:641691/127‑1 (MQ=255) tCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGt > 2:641691/1‑127 (MQ=255) gCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGt > 1:726708/1‑150 (MQ=255) cGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGtt < 1:1456737/150‑1 (MQ=255) gTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCagga < 2:386991/101‑1 (MQ=255) gTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCagga > 1:386991/1‑101 (MQ=255) aGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTgcc < 2:1751057/150‑1 (MQ=255) gCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTgccg > 1:2275701/1‑150 (MQ=255) gCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGAGCAGCGgccg < 2:503482/55‑1 (MQ=38) gCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGAGCAGCGgccg > 1:503482/1‑55 (MQ=38) ccAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGttt < 1:72493/145‑1 (MQ=255) ccAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGttt > 2:72493/1‑145 (MQ=255) cAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTgccgcc > 1:1131797/1‑150 (MQ=255) cAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTgccgcc > 1:1701484/1‑150 (MQ=255) gaggGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGgcc > 2:1654713/1‑49 (MQ=255) gaggGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGgcc < 1:1654713/49‑1 (MQ=255) gcgcATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTGCCGCCGCCCCGCCACTAAGCTg > 1:2036783/1‑150 (MQ=255) gcgcATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGAAGGCCGAGGGAAAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTGCCGCCGCCCCGCCACTAAGCTg < 1:16824/150‑1 (MQ=255) tGCTGGCACGGCCGCTGCTCAGCGGCTGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGAAAGGTGCCACGGCAATGCGGGGGCCAGCGTTTTGCCGCCGCCCCGCCACTAAGCTGGAGCACAg < 1:2369151/150‑1 (MQ=255) cccaggcGGCCGCTGAGCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACATAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTGCCGCCGCCCCGCCACTAAGCTGGAGCACAGTg > 1:552564/7‑150 (MQ=255) cTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCGGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTGCCGCCGCCCCGCCACTAAGCTGGAGCACAGTg < 2:726708/150‑1 (MQ=255) gCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTGCCGCCGCCCCGCCACTAAGCTGGAGCACAGTGCTg > 2:922454/1‑150 (MQ=255) aCGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCACTGCGGCGGCCAGCCGTTTGCCGCCGCCCCGCCACTAAGCTGGAGCACAGTGCTGGc > 1:183431/1‑150 (MQ=255) aCGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTGCCGCCGCCCCGCCa < 2:2228712/127‑1 (MQ=255) aCGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTGCCGCCGCCCCGCCa > 1:2228712/1‑127 (MQ=255) cGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGTACAGATGGTGCTGCAGAGGGTCATCGCAGCGCGCAAGGTGCCACAGCAATGCCGCGGCCAGCCGTTTGCCGCCGCCCCGCCACTAAGCTAGAGCACAGTGCCGGcc > 2:84541/1‑150 (MQ=255) gCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGt > 2:211339/1‑81 (MQ=255) gCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGt < 1:211339/81‑1 (MQ=255) ccGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTGCCGCCGCCCCGCCACTAAGCTGGAGCACAGTGCTGGCCggg > 1:222727/1‑150 (MQ=255) ccGCGGCTCAGCGGCCCCCTGGGCGCCTGCCCGGCCGAGGAATAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTGCCGCCGCCCCGCCACTAAGCTGGAGCACAGTGCTGGCCggg < 1:1812901/150‑1 (MQ=255) | TCAGCCTGTCGGGGCCACGCGACGCACGCGCCGCCATGCATGCCATCGAGGAAAGCTTCTGCCAGGTGGTGCTCGACCCGCAATTCGTCGATATCGGCGTCAGCCAGGAGGGCCGCGACTGGCGCATCGTGCTGGCACGGCCGCTGCTCAGCGGCCGCCTGGGCGACTGGCAGGCCGAGGGACAGAAGGTGCTGCAGGAGGTCAACGCCGCGCGCAAGGTGCCACGGCAATGCGGCGGCCAGCCGTTTGCCGCCGCCCCGCCACTAAGCTGGAGCACAGTGCTGGCCGGG > NC_002947/4042219‑4042508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |