BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	4,044,721	C→G	8.8%	G344A (GGG→GCG) ‡	PP_3566 ←	MFS transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,044,721	0	C	G	8.8%	313.0 / 16.1	103	G344A (GGG→GCG) ‡	PP_3566	MFS transporter
Reads supporting (aligned to +/- strand): ref base C (47/46); new base G (6/3); total (53/50)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01

Only 100 of 108 total aligned reads displayed.

ACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGCAACAAGGCCGCCGG  >  NC_002947/4044578‑4044866

acacAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCgg                                                                                                                                              <  2:408364/149‑1 (MQ=255)

acacAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCgg                                                                                                                                              >  1:408364/1‑149 (MQ=255)

 cacaACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCt                                                                                                                                            >  2:1781706/1‑150 (MQ=255)

  acaACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTg                                                                                                                                           <  2:1415874/150‑1 (MQ=255)

    aaCCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGccgcccgc                                                                                                                                                >  1:840267/1‑143 (MQ=255)

    aaCCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGccgcccgc                                                                                                                                                <  2:840267/143‑1 (MQ=255)

     aCCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCCCCCGCGGCTGGcc                                                                                                                                        >  1:112360/1‑150 (MQ=255)

        aGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCGGGCGGCTgaatgcg                                                                                                                                     <  2:2290034/150‑7 (MQ=255)

        aGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCggg                                                                                                                                     >  2:1373136/1‑150 (MQ=255)

             cacaCCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAg                                                                                                                                >  2:546049/1‑150 (MQ=255)

                agccGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGc                                                                                                                             >  2:706736/3‑150 (MQ=255)

                acCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTTGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGc                                                                                                                             <  1:559251/150‑1 (MQ=255)

                   cGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATTTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTa                                                                                                                          <  2:185848/150‑1 (MQ=255)

                   cGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTa                                                                                                                          <  1:378055/150‑1 (MQ=255)

                      cAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTCCACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTacac                                                                                                                       <  1:1373136/150‑1 (MQ=255)

                       aaCCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACt                                                                                                                      >  2:2092010/1‑150 (MQ=255)

                          cccGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCGGGCGGCTga                                                                                                                                          >  2:692804/1‑126 (MQ=255)

                          cccGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCGGGCGGCTga                                                                                                                                          <  1:692804/127‑2 (MQ=255)

                          cccGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTcc                                                                                                                   >  1:1514748/1‑149 (MQ=255)

                          cccGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCa                                                                                                                   >  2:97788/1‑150 (MQ=255)

                           ccGCCCCCACCAGTGCCACGCCTTTCCAGCCAAACTGGCTAAACAGCGCACTGGCCACCGCCGACCCCAGCCCCCCGCCGAGGAAGCTGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCAc                                                                                                                  <  1:493818/150‑1 (MQ=255)

                             gCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGc                                                                                                                <  1:266861/150‑1 (MQ=255)

                                cccACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTgg                                                                                                             >  2:1527737/1‑150 (MQ=255)

                                 ccaccaGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGTCGCCCGCGGCTgaatgcg                                                                                                                                     >  2:1020346/1‑119 (MQ=255)

                                 ccaccaGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGTCGCCCGCGGCTgaatgcg                                                                                                                                     <  1:1020346/125‑7 (MQ=255)

                                    ccaGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGa                                                                                                         <  1:625979/150‑1 (MQ=255)

                                        tGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGAc                                                                                                     <  2:2167772/150‑1 (MQ=255)

                                          ccACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTa                                                                                                                          <  1:1889652/127‑1 (MQ=255)

                                          ccACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTa                                                                                                                          >  2:1889652/1‑127 (MQ=255)

                                                cTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCa                                                                                             >  1:1553875/1‑150 (MQ=255)

                                                 ttGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGt                                                                                                <  2:1029861/146‑1 (MQ=255)

                                                 ttGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGt                                                                                                >  1:1029861/1‑146 (MQ=255)

                                                  tGCCATCAAAACTGGCTGAACAGCGCACTGCCCACCGCCTACCCCACCGCCCCGCCGAGCAAGATGCTGGTCCTGTCCACTGCATTCAGCCGCCCGCGGCTGNCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATc                                                                                           <  1:1143553/150‑1 (MQ=255)

                                                    ccagccaAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGa                                                                                                      <  2:1108775/137‑1 (MQ=255)

                                                    ccagccaAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACAATTCACGCTGGCCGATGa                                                                                                      >  1:1108775/1‑137 (MQ=255)

                                                      agccaAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTg                                                                                                                              >  2:1923972/1‑111 (MQ=255)

                                                      agccaAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTg                                                                                                                              <  1:1923972/111‑1 (MQ=255)

                                                       gccaAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAGGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCAc                                                                                      <  1:2080623/150‑1 (MQ=255)

                                                       gccaAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCAc                                                                                      <  1:2092010/150‑1 (MQ=255)

                                                         caAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCg                                                                                    >  1:1461428/1‑150 (MQ=255)

                                                          aaaCTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGc                                                                                   >  1:1861493/1‑150 (MQ=255)

                                                           aaCTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCa                                                                                  >  1:534094/1‑150 (MQ=255)

                                                              tGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAg                                                                               >  2:1542399/1‑150 (MQ=255)

                                                                gCTGAACACCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGATGATGCTGGTAATGTACACCGCCTTCAGCAGACCGCGCCTCGCAGCCTACCGTGCCGATCCTTCAGCCGGGCCGATGACCGGTTGCAGCTTCACCGCAAAGTc                                                                             <  2:635826/150‑1 (MQ=255)

                                                                  tGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCa                                                                           >  1:185550/1‑150 (MQ=255)

                                                                  tGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCa                                                                           >  1:326476/1‑150 (MQ=255)

                                                                   gAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGt                                                                                                >  2:664842/1‑128 (MQ=255)

                                                                   gAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGt                                                                                                <  1:664842/128‑1 (MQ=255)

                                                                   gAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAg                                                                          <  1:393387/150‑1 (MQ=255)

                                                                    aaCAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGCGAGCAATGCGGGTCATATAGACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGc                                                                         >  2:695606/1‑150 (MQ=255)

                                                                      cAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCaa                                                                       <  1:1443375/150‑1 (MQ=255)

                                                                        gcgcACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAaca                                                                     >  1:339951/1‑150 (MQ=255)

                                                                             cTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGccc                                                                >  2:1210475/1‑149 (MQ=255)

                                                                             cTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCg                                                                <  2:339951/150‑1 (MQ=255)

                                                                             cTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCg                                                                <  1:546049/150‑1 (MQ=255)

                                                                                gCCACCGCCGACCCCAGCGCCCCGACGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTa                                                             >  1:829615/1‑150 (MQ=255)

                                                                                 ccACCGCCGACCCCAGCGCGCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCCTGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTaa                                                            <  2:1156075/150‑1 (MQ=255)

                                                                                 ccACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCa                                                                           >  2:78298/1‑135 (MQ=255)

                                                                                 ccACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCa                                                                           <  1:78298/135‑1 (MQ=255)

                                                                                 ccACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTaa                                                            >  1:1417785/1‑150 (MQ=255)

                                                                                  cACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCa                                                                                                   >  2:1154010/1‑110 (MQ=255)

                                                                                  cACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCa                                                                                                   <  1:1154010/110‑1 (MQ=255)

                                                                                  cACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTcc                                                                            <  2:762374/133‑1 (MQ=255)

                                                                                  cACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAg                                                           >  1:2380053/1‑150 (MQ=255)

                                                                                     cgccgAACCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGcc                                                        <  1:1107929/150‑1 (MQ=255)

                                                                                      gccgACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGccc                                                       >  2:2125249/1‑150 (MQ=255)

                                                                                          aCCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAgga                                                   <  2:1553875/150‑2 (MQ=255)

                                                                                            cccAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCa                                                 >  2:1559035/1‑150 (MQ=255)

                                                                                            cccAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCa                                                 >  1:490155/1‑150 (MQ=255)

                                                                                              cAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCTCGCTTCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAAt                                               <  1:760120/150‑1 (MQ=255)

                                                                                              cAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGa                                                                                                      >  2:1432687/1‑95 (MQ=255)

                                                                                              cAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGa                                                                                                      <  1:1432687/95‑1 (MQ=255)

                                                                                                    cccGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCt                                         <  2:1461428/150‑1 (MQ=255)

                                                                                                        ccgAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTaa                                     <  1:1519679/150‑1 (MQ=255)

                                                                                                           aGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAAccc                                  <  2:1861493/150‑1 (MQ=255)

                                                                                                            ggAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCg                                 <  1:980007/150‑1 (MQ=255)

                                                                                                             gAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCgg                                <  2:534094/150‑1 (MQ=255)

                                                                                                               aGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCa                              <  1:1559035/150‑1 (MQ=255)

                                                                                                                 aTGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAATCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACt                            <  1:1158861/150‑1 (MQ=255)

                                                                                                                   gCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGt                          <  2:829615/150‑1 (MQ=255)

                                                                                                                   gCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGt                          >  2:1055961/1‑150 (MQ=255)

                                                                                                                     tGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCa                        >  2:2187882/1‑150 (MQ=255)

                                                                                                                      ggTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAg                       <  2:1592761/150‑1 (MQ=255)

                                                                                                                       gTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGc                      <  1:1055961/150‑1 (MQ=255)

                                                                                                                          aTGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGcccc                   >  2:1636790/1‑150 (MQ=255)

                                                                                                                          aTGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGc                      <  1:1333819/147‑1 (MQ=255)

                                                                                                                             tACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGc                >  1:1944802/1‑150 (MQ=255)

                                                                                                                               cacCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGcaa              >  2:388782/1‑150 (MQ=255)

                                                                                                                                acCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGcaac             >  1:1774241/1‑150 (MQ=255)

                                                                                                                                 ccGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACCCGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGcaaca            <  1:1164462/150‑1 (MQ=255)

                                                                                                                                   ccggccAGCCGCGGGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGc                <  2:1279476/139‑1 (MQ=255)

                                                                                                                                   ccggccAGCCGCGGGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGc                >  1:1279476/6‑144 (MQ=255)

                                                                                                                                   ccggccAGCCGCGGGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGCAACAAg          >  1:125205/6‑150 (MQ=255)

                                                                                                                                   ccggccAGCCGCGGGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGCAACAAg          >  1:363628/6‑150 (MQ=255)

                                                                                                                                     ggccAGCCGCGGGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGCAACAAGgc        >  1:2149521/4‑150 (MQ=255)

                                                                                                                                     ggccAGCCGCGGGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGCAACAAGgc        >  1:119980/4‑150 (MQ=255)

                                                                                                                                     aTTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGCAACAAGgc        >  2:2191953/1‑150 (MQ=255)

                                                                                                                                           ccgcccgcGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGCAACAAGGCCGCCgg  <  2:1490605/150‑1 (MQ=255)

                                                                                                                                               ccgcGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGc                                                                  >  2:1211745/1‑82 (MQ=255)

                                                                                                                                               ccgcGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGc                                                                  <  1:1211745/82‑1 (MQ=255)

ACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCACCGCCGACCCCAGCGCCCCGCCGAGGAAGATGCTGGTCATGTACACCGCATTCAGCCGCCCGCGGCTGGCCGGGTCCAGTGCGTACACTTCACGCTGGCCGATGACCATGTTCATCTGCACCGCAAAGTCCAGCAACACGCCGGTAAGGCCCAGGCCAATCACGCTGTAACCCGGCACTGTCAGCCCCAGCAACAAGGCCGCCGG  >  NC_002947/4044578‑4044866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`