| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,045,978 | C→A | 5.1% | Q262H (CAG→CAT) ‡ | PP_3567 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,045,978 | 0 | C | A | 5.1% | 312.8 / 4.5 | 97 | Q262H (CAG→CAT) ‡ | PP_3567 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (44/48); new base A (3/2); total (47/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.15e-01 | |||||||||||
GCAATGCGGCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTCCAG > NC_002947/4045830‑4046127 | gcAATGCGGCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCt > 2:90906/1‑150 (MQ=255)gcAATGCGGCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCt > 2:607184/1‑150 (MQ=255) aaTGCGGCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGc < 2:45411/150‑1 (MQ=255) ggCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTc < 1:2174165/150‑1 (MQ=255) ggCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTc > 2:559336/1‑150 (MQ=255) gccttGCGGACTGCGCAACACTAGTGACCGTGGATGAGCAAGTGTTCGCAAAAGTCGAGGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTGGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCg < 1:2040025/147‑1 (MQ=255) tttGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTACCAGTCggg < 1:1460929/150‑1 (MQ=255) aCTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCggg < 2:1926985/143‑1 (MQ=255) aCTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCggg > 1:1926985/1‑143 (MQ=255) aCTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATAtt > 2:978343/1‑150 (MQ=255) aCTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATAtt > 1:1447140/1‑150 (MQ=255) tGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCg < 1:90906/150‑1 (MQ=255) gcgcAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGc > 2:1765284/1‑150 (MQ=255) gcgcAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGc < 2:1934944/150‑1 (MQ=255) cgcAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCt < 1:391144/150‑1 (MQ=255) gcAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTg > 2:1034323/1‑150 (MQ=255) cAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGc < 1:2095307/150‑1 (MQ=255) aaCACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTCGCCTGCCAGTCGGGGAATATTCGCTGCa < 1:89595/150‑1 (MQ=255) gTGACCGTGTATTAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGccc < 1:584816/150‑1 (MQ=255) gTGACCGTGTATGAGCAAATTTTCCCAAAAGTCGATGGATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCAGATACAGGGCGGTGATGATGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGccc < 1:1042933/150‑1 (MQ=255) aCCGTGTATGAGCAACTTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGc > 2:643572/1‑150 (MQ=255) ccGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGcc > 2:2302529/1‑150 (MQ=255) gtgtATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCaa < 1:1765284/150‑1 (MQ=255) gtgtATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCaa < 2:419608/150‑1 (MQ=255) tgtATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAac < 2:1384444/150‑1 (MQ=255) aTGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAAcaca < 2:1546881/150‑1 (MQ=255) aaTTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTcgc < 1:112779/150‑1 (MQ=255) aaTTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGGGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTcgc < 1:1221804/150‑1 (MQ=255) ttCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTTCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGcc > 2:2396716/1‑133 (MQ=255) ttCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTTCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGcc < 1:2396716/133‑1 (MQ=255) gCAAAAGTCGATGAATGCGTTTACCCGCCGTGGGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAccag > 2:212499/1‑150 (MQ=255) gCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCCGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACCCATCCTCGCGCAccag > 2:469411/1‑150 (MQ=255) cAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAccagc > 1:392168/1‑150 (MQ=255) aaaaGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAccagcc > 2:1507722/1‑150 (MQ=255) aaaGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAccagcca < 1:52113/150‑1 (MQ=255) aaaGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAccagcca < 2:500821/150‑1 (MQ=255) aaaGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAccagcca < 2:2246272/150‑1 (MQ=255) tCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCg < 2:1540449/150‑1 (MQ=255) gATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGACCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGc > 2:75891/1‑150 (MQ=255) gATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATAAAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGc < 1:612772/150‑1 (MQ=255) aTGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGc < 2:1260415/105‑1 (MQ=255) aTGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGc > 1:1260415/1‑105 (MQ=255) tGAATGCGTTTACCCGCCGTGAGCCCGGGTGGTTGGGTATATACAGGGCGTTGATGCTGCTATTGGCAGCGCCAGGACTGGCCTGCCAGTCGGTGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCca < 1:469411/150‑1 (MQ=255) gAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCGGGCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTTGCGTACCAGCCAGTCGGCcag > 1:488963/1‑150 (MQ=255) aTGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTTCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCgagatcgg > 1:674249/1‑143 (MQ=255) tGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCcagcag > 2:1229316/1‑150 (MQ=255) gTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGc < 1:196001/150‑1 (MQ=255) gTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGc > 2:1541267/1‑150 (MQ=255) aCCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTACAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATa < 2:532593/150‑1 (MQ=255) ccgccgTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATAcc > 2:31189/1‑150 (MQ=255) cgccgTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCAGGCCAGTcct > 1:2363729/1‑77 (MQ=255) cgccgTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCAGGCCAGTcct < 2:2363729/79‑3 (MQ=255) ccgTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCAct < 1:1034323/150‑1 (MQ=255) gCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCTCCCTGCCAACCCATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcctgc < 2:945477/150‑1 (MQ=255) cccGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCa < 2:2287173/150‑1 (MQ=255) cccGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCa > 1:273660/1‑150 (MQ=255) cccGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACACCATCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCa < 1:559336/150‑1 (MQ=255) ccGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTCCCAg > 2:651480/1‑150 (MQ=255) cGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGt > 2:2025915/1‑150 (MQ=255) cGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAAGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGt < 1:978343/150‑1 (MQ=255) tggtTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGcc < 1:98910/150‑1 (MQ=255) gCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCAc > 1:196348/1‑150 (MQ=255) tataCAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCa > 1:1814865/1‑150 (MQ=255) cAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcct > 1:300554/1‑127 (MQ=255) cAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcct < 2:300554/127‑1 (MQ=255) aGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGGCAGGCAGTggta > 1:197210/1‑133 (MQ=255) ggCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCg < 1:2241868/100‑1 (MQ=255) ggCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCg > 2:406593/1‑100 (MQ=255) ggCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCg < 1:406593/100‑1 (MQ=255) ggCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCg > 2:2241868/1‑100 (MQ=255) gTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGc < 2:1285265/108‑1 (MQ=255) gTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGc > 1:1285265/1‑108 (MQ=255) gTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGc > 1:2014710/1‑150 (MQ=255) gTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGc < 2:2014710/150‑1 (MQ=255) gATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCAtt > 1:49869/1‑150 (MQ=255) tgctATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTcg > 2:118495/1‑74 (MQ=255) tgctATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTcg < 1:118495/74‑1 (MQ=255) tgctATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGgcgc > 1:1971711/1‑150 (MQ=255) tgctATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGgcgc > 2:38579/1‑150 (MQ=255) gctATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCt < 1:643572/150‑1 (MQ=255) tATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTg > 1:950080/1‑96 (MQ=255) tATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTg < 2:950080/96‑1 (MQ=255) ttGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTgcgc > 1:34673/1‑150 (MQ=255) ttGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTgcgc > 2:495436/1‑150 (MQ=255) tGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCa < 1:607184/150‑1 (MQ=255) tGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCAAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCa < 1:2302529/150‑1 (MQ=255) gcgcCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGc > 2:1026450/1‑150 (MQ=255) gcCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGccc < 2:392168/150‑1 (MQ=255) cccgACTGGCAGGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGt > 1:104130/4‑143 (MQ=255) cacgACTGGCAGGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGt < 2:104130/140‑1 (MQ=255) cAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCg > 1:1413463/1‑125 (MQ=255) cAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCg < 2:1413463/125‑1 (MQ=255) tcgACTGGCAGGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTCCCAGCCAGTAGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACt > 1:1552870/3‑150 (MQ=255) gACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTa > 2:1960380/1‑150 (MQ=255) aCTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTAc < 1:31189/150‑1 (MQ=255) gCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTgcgc > 2:1584902/1‑132 (MQ=255) gCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTgcgc < 1:1584902/132‑1 (MQ=255) cTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTCCAg > 2:1545326/1‑150 (MQ=255) cTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTCCAg > 1:622364/1‑150 (MQ=255) | GCAATGCGGCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTCCAG > NC_002947/4045830‑4046127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |