| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,073,653 | G→A | 5.9% | intergenic (‑147/+477) | mdtA ← / ← PP_3586 | multidrug transporter membrane fusion protein/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,073,653 | 0 | G | A | 5.9% | 300.0 / 6.5 | 101 | intergenic (‑147/+477) | mdtA/PP_3586 | multidrug transporter membrane fusion protein/transposase |
| Reads supporting (aligned to +/- strand): ref base G (45/50); new base A (2/4); total (47/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
TTGAACGAACCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGG > NC_002947/4073510‑4073799 | ttGAACGAACCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTcc > 1:2384290/1‑150 (MQ=255) gaacgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACACGTTCCgt < 2:1657400/150‑2 (MQ=255) aacgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCggg < 2:2384290/150‑1 (MQ=255) aacgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACACGTTCCggg < 1:2264367/150‑1 (MQ=255) acgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGc > 1:1090017/1‑150 (MQ=255) acgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACACGTTCCGGGc < 2:1019268/150‑1 (MQ=255) gAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAg > 2:1389782/1‑144 (MQ=255) gAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAg < 1:1389782/144‑1 (MQ=255) gAATGACGACTCGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGtt < 1:537722/150‑1 (MQ=255) acgacTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGACCGTTACAGGGTGTTGCTTg > 2:1075073/1‑150 (MQ=255) gacTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGa < 2:2209371/150‑1 (MQ=255) acTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGtt > 1:2193316/1‑122 (MQ=255) acTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGtt < 2:2193316/122‑1 (MQ=255) ggaTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCgg < 1:1335659/150‑1 (MQ=255) gaTGCACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGcc < 1:126308/119‑1 (MQ=255) gaTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGcc > 2:126308/1‑119 (MQ=255) gaTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCggg > 1:840568/1‑150 (MQ=255) gaTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCggg > 2:1074254/1‑150 (MQ=255) tGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGtt > 1:1696681/1‑130 (MQ=255) tGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGtt < 2:1696681/130‑1 (MQ=255) gAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCt > 1:1701039/1‑150 (MQ=255) gAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCt > 2:1281811/1‑150 (MQ=255) cGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGaa < 2:128552/150‑1 (MQ=255) cGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGaa < 2:128657/150‑1 (MQ=255) tAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTg < 1:1714134/128‑1 (MQ=255) tAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTg > 2:1714134/1‑128 (MQ=255) aGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCg > 2:249121/1‑104 (MQ=255) aGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCg < 1:249121/104‑1 (MQ=255) gCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCg > 1:1223597/1‑150 (MQ=255) aCTGCCATCGTTTTAGAAAAGGGCTTTTACCAGAGGTTTACCTTTGCCTAACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCTTTACAGGGTGTTGCTTGTTGCGGTGGCGGGCCTGAAGGTTCGGt < 1:571007/150‑1 (MQ=255) cTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGtt < 1:692213/150‑1 (MQ=255) ccATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGcc > 2:1651284/1‑150 (MQ=255) cATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCGGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGACTGAAGGTTCGGATGccg > 2:1341556/1‑149 (MQ=255) cATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTgg > 2:1722037/1‑127 (MQ=255) cATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTgg < 1:1722037/127‑1 (MQ=255) cATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCt < 2:1090017/150‑1 (MQ=255) gTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTc < 2:1448452/150‑1 (MQ=255) gTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTc > 1:117245/1‑150 (MQ=255) ttttAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCt > 1:559184/1‑150 (MQ=255) ttAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCgg > 1:1928536/1‑90 (MQ=255) ttAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCgg < 2:1928536/90‑1 (MQ=255) ttAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTgg < 2:117245/150‑1 (MQ=255) aaaGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCtt > 1:1569136/1‑150 (MQ=255) aaaGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGGTCCGGGCCGTTAAAGCGTGTTCGTTGGCGCGCGCGCGGGTCGTAAGGTTCGGTTGCCTGGTCTGGCCCtt > 1:1141551/1‑150 (MQ=255) aaGGCCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCttt < 1:2003503/150‑1 (MQ=255) aGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTc > 2:766529/1‑150 (MQ=255) ggCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAgg < 2:2243945/92‑1 (MQ=255) ggCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGAGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAgg > 1:2243945/1‑92 (MQ=255) ggCCATTACCAGAGGTTTACCTTTGCTTGACGTTGCCAAGAGGCGGAATTTTAAATGAAACCGGCCCGGAACGTGTTCCGGTCGGTAACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCTCTTTcgc < 2:584799/150‑1 (MQ=255) ccTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGtt > 2:1983772/1‑123 (MQ=255) ccTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGtt < 1:1983772/123‑1 (MQ=255) ccTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCgg < 2:794651/150‑1 (MQ=255) cTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCt > 2:221328/1‑131 (MQ=255) cTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCt < 1:221328/131‑1 (MQ=255) tttACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGt > 1:810772/1‑150 (MQ=255) tttACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGt < 2:255210/150‑1 (MQ=255) ttACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTg > 1:2177436/1‑150 (MQ=255) cAGAGGTTTACCTTTGCCTGGCGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAAcc > 1:1757108/1‑150 (MQ=255) agagGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAAccc > 2:2388278/1‑150 (MQ=255) gagGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCg > 1:330673/1‑150 (MQ=255) agGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGc < 1:2043302/150‑1 (MQ=255) gTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGTTTGCCTGGTCTGGCCCTTTCGCGGGTGATCCCGCt < 2:2299599/149‑1 (MQ=255) gTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCtt > 2:179080/1‑150 (MQ=255) gTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCtt < 2:1701039/150‑1 (MQ=255) gTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCt > 1:2299599/1‑149 (MQ=255) tttACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTc < 1:244115/150‑1 (MQ=255) tACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGCCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTa < 1:1341556/150‑1 (MQ=255) cTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAAccc < 1:2213519/140‑1 (MQ=255) cTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAAccc > 2:2213519/1‑140 (MQ=255) tttGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTAt > 1:661819/1‑147 (MQ=255) tttGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTAt < 2:661819/147‑1 (MQ=255) gCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGccc < 1:2267370/120‑1 (MQ=255) gCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGccc > 2:2267370/1‑120 (MQ=255) cTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATcaaacaaa > 1:2040736/1‑150 (MQ=255) gACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTc < 2:520976/98‑1 (MQ=255) gACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTc > 1:520976/1‑98 (MQ=255) gACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAg < 1:179080/150‑1 (MQ=255) gCCAAGAGGCAGAATTTTAAATGAAAACGGCTCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGAAGCGGTGGCGGGCCTGAAGGTTCGGCTGCCCGGTCTGGCTCTTTCGCCGGTGAACCCGCTTCTATCAAACAAAAGATAAcc < 1:839941/150‑1 (MQ=39) cAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGt > 2:1222996/1‑101 (MQ=255) cAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGt < 1:1222996/101‑1 (MQ=255) cAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCa > 2:1380300/1‑150 (MQ=255) aaGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCAc < 2:330673/150‑1 (MQ=255) gCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttc < 1:1074254/150‑1 (MQ=255) aaTTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttctttc < 2:1223597/150‑1 (MQ=255) aaTTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttctttc < 2:1757108/150‑1 (MQ=255) ttttAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttctttctt > 1:235320/1‑149 (MQ=255) aaaaCGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa > 1:4721/1‑141 (MQ=255) aaaaCGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa < 2:4721/141‑1 (MQ=255) aaaCGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAGCCCACTGTTCTTTCTAGCGaaaaaaa < 1:2388278/150‑1 (MQ=255) aaCGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAAc > 2:1541794/1‑150 (MQ=255) cGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAg < 1:766529/150‑1 (MQ=255) ggCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTc < 2:641468/86‑1 (MQ=255) ggCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTc > 1:641468/1‑86 (MQ=255) ggCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAgg < 1:1651284/150‑1 (MQ=255) cccGGAACACGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAg > 1:2160483/1‑135 (MQ=255) cccGGAACACGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAg < 2:2160483/135‑1 (MQ=255) cccGGAACACGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgcg > 2:2092033/1‑150 (MQ=255) ccGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCggt < 1:2269435/88‑2 (MQ=255) ccGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCggg > 2:2269435/1‑88 (MQ=255) aaCGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCgg < 1:1281811/150‑1 (MQ=255) | TTGAACGAACCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGG > NC_002947/4073510‑4073799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |