| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,079,214 | T→A | 7.1% | E9D (GAA→GAT) ‡ | sdaC ← | serine:H+ symport permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,079,214 | 0 | T | A | 7.1% | 260.5 / 9.4 | 85 | E9D (GAA→GAT) ‡ | sdaC | serine:H+ symport permease |
| Reads supporting (aligned to +/- strand): ref base T (34/45); new base A (4/2); total (38/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.99e-01 | |||||||||||
AGCAGCGGCCAGAAGCCGCCAAGGCCGGCGTTGATCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCT > NC_002947/4079065‑4079363 | agcagcGGCCAGAAGCCGCCAAGGCCGGCGTTGATCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCgttgt > 2:1079964/1‑150 (MQ=255) cAGAAGCCGCCAAGGCCGGCGTTGATCGGCAGGAACAGTGTCCCGGCGCCGATTGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCtt < 1:1132158/150‑1 (MQ=255) aGAAGCCGCCAAGGCCGGCGTTGATCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTg < 1:129930/150‑1 (MQ=255) gAAGCCGCCAAGGCCGGCGTTGATCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGAACAACGCtttg < 2:632362/150‑3 (MQ=255) aaGCCGCCAAGGCCGGCGTTGATCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTggg > 1:578729/1‑150 (MQ=255) ccgccAAGGCCGGCGTTGATCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGcc > 1:609598/1‑150 (MQ=255) aaGGCCGGCGTTGATCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCtc > 2:1417183/1‑150 (MQ=255) ggCCGGCGTTGAACGACATGAATGGTGTCCCGGCGCGGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCtcat < 1:533472/150‑1 (MQ=255) ttGATCGGCAGGAACAGTGTCCCGGCACCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCCGCTCATTCATTCCg < 1:1134151/150‑1 (MQ=255) tGATCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCgg < 2:1245223/150‑1 (MQ=255) tGATCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCgg < 1:935719/150‑1 (MQ=255) tGATCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCgg < 1:1417183/150‑1 (MQ=255) aTCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGt > 2:2121955/1‑150 (MQ=255) aTCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGt < 2:1380277/150‑1 (MQ=255) gCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAg < 1:1535361/150‑1 (MQ=255) cAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGc < 1:2121955/150‑1 (MQ=255) aGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCt < 2:1510151/150‑1 (MQ=255) aGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCt > 1:1447944/1‑150 (MQ=255) ggAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGGCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTc > 1:662895/1‑150 (MQ=255) gAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGTTGGCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTcc > 1:1750784/1‑150 (MQ=255) gAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTcc > 2:132142/1‑150 (MQ=255) gAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTcc > 2:1014381/1‑150 (MQ=255) aaCAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCa < 1:1404422/150‑1 (MQ=255) aGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTCGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTc < 1:1161753/150‑1 (MQ=255) tgtCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCtt > 2:1806127/1‑112 (MQ=255) tgtCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCtt < 1:1806127/112‑1 (MQ=255) cccGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAg > 1:1091524/1‑150 (MQ=255) cGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGAc < 2:1627772/150‑1 (MQ=255) ggCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACt < 1:2263763/150‑1 (MQ=255) gATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACa < 2:609598/150‑1 (MQ=255) aTGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAg > 1:346276/1‑150 (MQ=255) tGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAgg < 2:346276/150‑1 (MQ=255) gCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCCCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCt < 1:430003/150‑1 (MQ=255) tgtgCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTgg < 2:564100/96‑1 (MQ=255) tgtgCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTgg > 1:564100/1‑96 (MQ=255) ccGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAAt > 1:889469/1‑150 (MQ=255) cGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAgg > 1:590318/1‑141 (MQ=255) cGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAgg < 2:590318/141‑1 (MQ=255) gAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATgg > 1:1290857/1‑150 (MQ=255) aaCAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACTGGCTGAGAATGGc < 2:600861/150‑1 (MQ=255) aaCAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGGTGAGAATTGc < 2:599898/150‑1 (MQ=255) aaCAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGc < 1:558756/150‑1 (MQ=255) aaCAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGACGGGGCCAAGTGCCACCCGGCATGGTTCAACGCTTTGGTCCTGCTCCTTCCTTACGGGTTTAGTGTCGCTCTCAAGACTGCAACAGGCTGAGAATGGc < 1:551428/150‑1 (MQ=255) cccAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATa > 2:764434/1‑150 (MQ=255) cccAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATa < 1:519009/150‑1 (MQ=255) ccAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAg > 2:2044543/1‑150 (MQ=255) cAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGa > 1:464318/1‑150 (MQ=255) aTCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGAc < 1:1925419/147‑1 (MQ=255) aTCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGAc > 2:1925419/1‑147 (MQ=255) tCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTg < 2:315486/119‑1 (MQ=255) tCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTg > 1:315486/1‑119 (MQ=255) ccAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTc > 1:745591/1‑150 (MQ=255) aGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGc > 1:2402191/1‑150 (MQ=255) gtggtgTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGccc < 2:1447944/150‑1 (MQ=255) ggtgTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCaa < 2:578729/150‑1 (MQ=255) gTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCaa < 1:117598/56‑1 (MQ=255) gTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCaa > 2:117598/1‑56 (MQ=255) gTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAAc > 1:1120637/1‑150 (MQ=255) gTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAAc > 2:2200296/1‑150 (MQ=255) tGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAAcc < 1:132142/150‑1 (MQ=255) aCGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGc > 1:1028087/1‑67 (MQ=255) aCGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGc < 2:1028087/67‑1 (MQ=255) gcCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGaaaa > 2:1630710/1‑150 (MQ=255) gcCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGaaaa > 1:1386262/1‑150 (MQ=255) ccAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGGTAAGCTCCACTCGCAAGACTGCAACTGACTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGaaagag > 1:162310/1‑147 (MQ=255) gTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAgggg < 1:2200296/150‑1 (MQ=255) cggGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCAc < 2:1750784/150‑1 (MQ=255) gggggTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGc < 1:799821/97‑1 (MQ=255) gggggTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGc > 2:799821/1‑97 (MQ=255) gTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGa < 2:1760280/137‑1 (MQ=255) gTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGa > 1:1760280/1‑137 (MQ=255) cGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAgg < 1:458606/150‑1 (MQ=255) gATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGaaaa > 1:1175373/1‑123 (MQ=255) gATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGaaaa < 2:1175373/123‑1 (MQ=255) gATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGt < 1:1630710/150‑1 (MQ=255) gATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGt < 1:1079964/150‑1 (MQ=255) aTTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGtt < 2:1763786/150‑1 (MQ=255) aTTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGtt < 2:1290857/150‑1 (MQ=255) ttCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTg < 2:889469/150‑1 (MQ=255) cTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCa < 1:742720/150‑1 (MQ=255) cccaaGCGTTGAACAACGCTTTGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAAATCACCCGGAAAAGAGGGGCTCTATTGTGCACGGGAAGGTTGCACt > 2:1599323/4‑150 (MQ=255) ccaaGCGTTGAACAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGATCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACtt > 1:1042443/3‑150 (MQ=255) caaGCGTTGAACAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGcc > 2:1442098/2‑99 (MQ=255) caaGCGTTGAACAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGcc < 1:1442098/98‑1 (MQ=255) caaGCGTTGAACAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAGCTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTg > 1:1145195/2‑150 (MQ=255) aGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTACGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGACAAGAGGGGAGTGATTGGGCACGGAAATGTTGCACTTGCg > 2:1162311/1‑150 (MQ=255) gttgttCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAg > 2:2397645/1‑150 (MQ=255) ttCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCt > 1:411534/1‑150 (MQ=255) ttCAACGCTTGGGGCCTGCTCATTCATTCCCGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGCAATAGACGTTTCGCCCAACTCAACCGGACAAGAGGGGCGCGATTGTGCCAGGAAAGGTTGCCCTTGCGAGCCCCt > 2:107460/1‑150 (MQ=255) | AGCAGCGGCCAGAAGCCGCCAAGGCCGGCGTTGATCGGCAGGAACAGTGTCCCGGCGCCGATGGCTGTGCCGAACAGGCCCAGCATCCAGGTGGTGTCGTGACGCGCCCAGGTGCCGAGGGCGGCGGGGGTCGATTCTGCAAAGCGTTGTTCAACGCTTGGGGCCTGCTCATTCATTCCGGGTGAAGCTCCACTCGCAAGACTGCAACAGGCTGAGAATGGCGAAATAGACGTTTCGCCCAACTCAACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCT > NC_002947/4079065‑4079363 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |