| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,138,324 | T→C | 6.9% | intergenic (‑95/‑222) | PP_3641 ← / → PP_3643 | cytosine/purine/uracil/thiamine/allantoin permease family protein/oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,138,324 | 0 | T | C | 6.9% | 213.3 / 3.6 | 72 | intergenic (‑95/‑222) | PP_3641/PP_3643 | cytosine/purine/uracil/thiamine/allantoin permease family protein/oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (39/28); new base C (2/3); total (41/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01 | |||||||||||
CGTAATCGACCGTGTGATTCTCGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAATTCCGCTTGCA > NC_002947/4138175‑4138466 | cGTAATCGACCGTGTGATTCTCGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACtttt > 2:1575139/1‑150 (MQ=255)cGTAATCGACCGTGTGATTCTCGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACtttt < 1:1562519/150‑1 (MQ=255)cGTAATCGACCGTGTGATTCTCGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGAATTCCAAACtttt < 1:1988580/150‑1 (MQ=255) gTAATCGACCGTGTGATTCTCGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTg < 1:2151577/150‑1 (MQ=255) tAATCGACCGTGTGATTCTCGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGa < 1:856186/150‑1 (MQ=255) tAATCGACCGTGTGATTCTCGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGa < 1:206814/150‑1 (MQ=255) tAATCGACCGTGTGATTCTCGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTCGa < 2:1597662/150‑1 (MQ=255) cGACCGTGTGATTCTCGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGacaac > 1:1246843/1‑150 (MQ=255) cGTGTGATTCTCGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTg < 1:1575139/150‑1 (MQ=255) ttCTCGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGAGCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCa > 1:2319364/1‑150 (MQ=255) ctcGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATg > 1:27600/1‑150 (MQ=255) tcGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGa > 1:1816971/1‑150 (MQ=255) aCAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGaaaa > 1:2407758/1‑150 (MQ=255) acgacgGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCg > 1:1059146/1‑150 (MQ=255) cgacgGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAacac < 2:806217/118‑1 (MQ=255) cgacgGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAacac > 1:806217/1‑118 (MQ=255) acgGTTGGGACATGATTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCtt < 2:1020765/150‑1 (MQ=255) ttGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCATTGTAAGGAAACCGCATCAAGGCGACCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCaa > 2:1390474/1‑150 (MQ=255) gggACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCaaaa < 2:2407758/150‑1 (MQ=255) ggACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACTTCCACTGATCCGCTTGCAAAAc < 2:1836036/150‑1 (MQ=255) ggACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGc < 1:145099/130‑1 (MQ=255) ggACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGc > 2:145099/1‑130 (MQ=255) ggACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAAc < 1:1390474/150‑1 (MQ=255) aCATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAAccc > 2:880057/1‑150 (MQ=255) aTGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCt > 1:778068/1‑150 (MQ=255) tGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCa < 2:466341/113‑1 (MQ=255) tGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCa > 1:466341/1‑113 (MQ=255) tCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGc < 2:1246843/150‑1 (MQ=255) tCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGc < 1:880057/150‑1 (MQ=255) tCGAAAGGTCGTTTTTATCTTTGTAAGGAAAACGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACaaagctc > 1:962474/1‑146 (MQ=255) tttttATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTCGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCa > 2:2188272/1‑150 (MQ=255) tttttATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTCGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCa > 2:2184959/1‑150 (MQ=255) tttATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAg < 1:1393954/150‑1 (MQ=255) aTCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGcc > 2:406632/1‑150 (MQ=255) tCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGGTGCGGACCATATTATGGTATTCTGAACTTTTGACAACACTGATCCTCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCa > 1:577242/1‑150 (MQ=255) tttGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACg > 2:829459/1‑150 (MQ=255) tttGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATAAAAAAACGGCCACTGATCCGCTCGCAAAACCCCTGCGACAAAACGCCCCACCCCTCAAGGCCACg > 2:70339/1‑150 (MQ=255) aGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTc > 1:712718/1‑150 (MQ=255) aaCCGCATCAAGGCTGCCTCTCACCTGCGGACCTTATTATGGTATTCCAAACTTTTCACAACACTCATCCGCATGAAAAAACGGCCACTGATCCGCTTGCATAACCCCTCCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCgg < 2:962474/150‑1 (MQ=255) ccGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGc > 2:41872/1‑109 (MQ=255) ccGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGc < 1:41872/109‑1 (MQ=255) gCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTGTTCGCGGCttt < 2:712718/150‑1 (MQ=255) gCATCAAGGCGGCCTCTCAGCTGCGGAACATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCttt > 1:289146/1‑150 (MQ=255) tCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTg < 2:895608/148‑1 (MQ=255) tCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTg > 1:895608/1‑148 (MQ=255) gcggcCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCGCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGtt > 1:1837763/1‑150 (MQ=255) gcggcCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGtt > 1:392934/1‑150 (MQ=255) cggcCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTc < 2:778068/150‑1 (MQ=255) ggcCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCa < 2:1059146/150‑1 (MQ=255) ctctCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATcg > 2:619767/1‑150 (MQ=255) gCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCACGaaaa < 1:2092465/150‑1 (MQ=255) cTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTgg > 1:2384691/1‑132 (MQ=255) cTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTgg < 2:2384691/132‑1 (MQ=255) cTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAAc < 2:1816971/150‑1 (MQ=255) ggACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAg < 2:27600/150‑1 (MQ=255) ccATATTATGGTATTCCAAACTTTCGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGt < 1:2188272/150‑1 (MQ=255) ccATATTATGGTATTCCAAACTTTCGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGt < 1:2184959/150‑1 (MQ=255) tattatGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCg > 2:703798/1‑86 (MQ=255) tattatGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCg < 1:703798/86‑1 (MQ=255) ttatGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGaaa > 2:1649645/1‑150 (MQ=255) tatGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGaaaa > 2:2177164/1‑150 (MQ=255) atGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAAt > 1:1943111/1‑150 (MQ=255) atGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAAt > 2:540552/1‑150 (MQ=255) atGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAAt > 1:2183518/1‑150 (MQ=255) tATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACAGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAATTCCg > 1:292997/1‑150 (MQ=255) aTTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAATTCCGc < 2:289146/150‑1 (MQ=255) tCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAATTCCGCtt < 2:292997/150‑1 (MQ=255) cAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAACCCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCATTCATCGCGAAAACGCAGGGATGAAAATTGGGCTTGc > 2:137640/1‑150 (MQ=255) cAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAATTCCGCtcgc > 1:889600/1‑147 (MQ=255) cAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAATTCCGCTTGc > 2:623609/1‑150 (MQ=255) cAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAATTCCGCTTGc > 2:895335/1‑150 (MQ=255) aaaCTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTgg < 1:1715562/108‑1 (MQ=255) aaaCTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTgg > 2:1715562/1‑108 (MQ=255) aaaCTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAATTCCGCTTGCa > 2:115875/1‑150 (MQ=255) aaaCTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTAGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAATTCCGCTTGCa > 1:1352297/1‑150 (MQ=255) | CGTAATCGACCGTGTGATTCTCGACAAACTGGTGTTGCGACGACGGTTGGGACATGGTTTTCAGCTCGAAAGGTCGTTTTTATCTTTGTAAGGAAACCGCATCAAGGCGGCCTCTCAGCTGCGGACCATATTATGGTATTCCAAACTTTTGACAACACTGATCCGCATGAAAAAACGGCCACTGATCCGCTTGCAAAACCCCTGCGACAAACCGCCTCACCGCTCAAGGCCACGTTTTTCGCGGCTTTGGGCCGTTCATCGCGAAAACGCAGGGTTGAAAATTCCGCTTGCA > NC_002947/4138175‑4138466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |