| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,165,671 | C→T | 11.6% | G159R (GGG→AGG) | PP_3666 ← | MHS family metabolite MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,165,671 | 0 | C | T | 11.6% | 220.3 / 18.5 | 86 | G159R (GGG→AGG) | PP_3666 | MHS family metabolite MFS transporter |
| Reads supporting (aligned to +/- strand): ref base C (38/38); new base T (6/4); total (44/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.02e-01 | |||||||||||
CGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGTG > NC_002947/4165522‑4165819 | cgccgcCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGccc < 1:133939/150‑1 (MQ=255) gccAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAggc < 2:1237044/150‑1 (MQ=255) gAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTa > 2:1793559/1‑150 (MQ=255) aaCGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTAc < 1:629057/150‑1 (MQ=255) aCGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACt > 2:1451313/1‑150 (MQ=255) ttcAGCCGCCAGCCCCACCCCTGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCg < 2:998137/148‑1 (MQ=255) aGGCGCCAGCCCCACTCATGCAGGGCTTAACTGCTGAGCAGCTCATGCAGCAACGCGACGAACGCCGCCCCGAACAACAACCCCGCCGCCGTGCTGGCCGGCCCGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGAGGGTACTCggag > 1:998137/1‑148 (MQ=255) ggCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCa < 1:983261/150‑1 (MQ=255) gcgcCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAg > 1:907383/1‑150 (MQ=255) ccAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCGCATGCAGCACCGCGACGAACGCCGCACCGAACAACAGCCCCGCCGCCGTGCTGGCCGGCACGAGGCTGGTGTACAACCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGaa < 1:107807/150‑1 (MQ=255) cAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAAc < 1:1506036/150‑1 (MQ=255) cACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCg < 1:1451313/150‑1 (MQ=255) cACTCATGCAGGGCTTCACGTTCGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACACCCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCg < 1:1328849/150‑1 (MQ=255) cTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGc > 1:139113/1‑150 (MQ=255) tCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCTGGgcggcgtggc < 1:1127089/128‑5 (MQ=255) tCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCTGGgcggcgtggc > 2:1127089/1‑124 (MQ=255) tCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCACTCGCCGTGCTGGCCCGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGcc > 1:1976266/1‑150 (MQ=255) tGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCg < 1:2322543/150‑1 (MQ=255) gggCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGt > 2:1674634/1‑150 (MQ=255) ttCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTc > 1:1004230/1‑150 (MQ=255) ttCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTc > 1:444808/1‑150 (MQ=255) cACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCAc > 2:1840805/1‑150 (MQ=255) ctgctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCAccc < 1:1690908/150‑1 (MQ=255) tgctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCTGGgcggcgtgg < 2:1063940/111‑4 (MQ=255) tgctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCTGGgcggcgtgg > 1:1063940/1‑108 (MQ=255) tgctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCg > 1:1037719/1‑150 (MQ=255) tgctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCg > 1:1477214/1‑150 (MQ=255) ctgAGCAGCTCTTGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAg < 2:1358246/150‑1 (MQ=255) gAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGc < 1:1068498/150‑1 (MQ=255) cATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAAcc < 1:175240/150‑1 (MQ=255) cATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAAcc < 2:444808/150‑1 (MQ=255) tGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCTGGgcggcgtg > 1:1279581/1‑94 (MQ=255) tGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCTGGgcggcgtg < 2:1279581/96‑3 (MQ=255) gcagcaCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCt < 2:144748/150‑1 (MQ=255) gcagcaCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCCGCGTACTCACCCGAGGCGGAAAACCCCt < 1:222736/150‑1 (MQ=255) gcaCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTa > 2:1974521/1‑150 (MQ=255) caCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTAc < 1:1674634/150‑1 (MQ=255) caCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTAc < 2:1976266/150‑1 (MQ=255) ccGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCa < 2:914298/150‑1 (MQ=255) ccGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCa > 1:2346118/1‑150 (MQ=255) ccGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCa > 1:158921/1‑150 (MQ=255) gtacggACGCCGCGCCGAACAACGAGCGCGCCGCCGTGGTGGCCGGCACGATGCTGGTGTACGAGCCACGCGGCCCAGGCGGCGCGTACTCGGGCAGGAACGCAGCGGGCCCGGCGTGCTCACCCGAGGCGGAAAACCCCTGTACCAGGc < 2:260680/148‑1 (MQ=255) acgaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCgg > 2:2248479/1‑150 (MQ=255) cgaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCgta > 2:1433111/1‑148 (MQ=255) gaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGAt < 2:1004230/150‑1 (MQ=255) aCGCCGCACCGAACAACACCCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCAACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATca < 1:2306808/150‑1 (MQ=255) aCGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCgg < 2:466298/126‑1 (MQ=255) aCGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCgg > 1:466298/1‑126 (MQ=255) aCGCAGCACCCAACAAAAACCCCGCCGCCGTGCTTGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGACGGaaga < 2:139113/150‑4 (MQ=255) cgcACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcagcaa < 1:2173686/150‑1 (MQ=255) aCCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcagcaacag > 2:694555/1‑150 (MQ=255) aCCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcagcaa > 2:2195303/1‑147 (MQ=255) aCCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcagcaa < 1:2195303/147‑1 (MQ=255) cGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCAGCCCAGGCGGCGCGTACTGGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcagcaacagca > 1:1176403/1‑150 (MQ=255) aacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGc < 1:345426/86‑1 (MQ=255) aacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGc > 2:345426/1‑86 (MQ=255) aacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGcc > 1:1564395/1‑150 (MQ=255) acaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCg < 1:694555/150‑1 (MQ=255) caacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATc > 2:823938/1‑133 (MQ=255) caacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATc < 1:823938/133‑1 (MQ=255) aacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGt > 2:1991486/1‑150 (MQ=255) ccccGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGTACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGc > 2:2326180/1‑150 (MQ=255) cccGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCATGAAAGCAGCAGCGCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCGGGGGcc > 1:549432/1‑150 (MQ=255) ccgccgccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGccc > 1:2159409/1‑150 (MQ=255) cgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGAGGATCAGCAACAGCAAGGCCGGTGCCCACAGccc > 2:499586/1‑150 (MQ=255) gCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTgc > 2:1076361/1‑150 (MQ=255) ccGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGTACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTgcg < 1:2326180/150‑1 (MQ=255) ccGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGa < 2:2025676/91‑1 (MQ=255) ccGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGa > 1:2025676/1‑91 (MQ=255) cGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTgcgc > 1:1675472/1‑150 (MQ=255) ggCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCa < 2:2346118/150‑1 (MQ=255) gtgtACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAg < 2:876396/92‑1 (MQ=255) gtgtACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAg > 1:876396/1‑92 (MQ=255) gtgtACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCa < 2:1939735/138‑1 (MQ=255) gtgtACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCa > 1:1939735/1‑138 (MQ=255) gtgtACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGcaac < 1:1840805/150‑1 (MQ=255) aCAAGACACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGc > 2:1699787/1‑150 (MQ=255) gtacACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCg < 1:1066559/135‑1 (MQ=255) gtacACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCg > 2:1066559/4‑138 (MQ=255) tacgcgccgcCTGGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGAt > 1:1997766/5‑150 (MQ=255) tacgcgccgcCTGGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGAt > 2:1910296/5‑150 (MQ=255) cgcgccgcCTGGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCt > 1:1824961/3‑75 (MQ=255) cgcgccgcCTGGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCt < 2:1824961/73‑1 (MQ=255) aCGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTgc > 1:153851/1‑124 (MQ=255) aCGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTgc < 2:153851/124‑1 (MQ=255) cgccCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGc < 1:64821/111‑1 (MQ=255) cgccCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGc > 2:64821/1‑111 (MQ=255) cccAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGt < 2:1564395/150‑1 (MQ=255) ccAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGTg < 2:2159409/150‑1 (MQ=255) | CGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGTG > NC_002947/4165522‑4165819 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |