Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	4,170,224	T→G	7.0%	intergenic (‑288/‑99)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,170,224	0	T	G	7.0%	183.3 / 4.9	69	intergenic (‑288/‑99)	katG/PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (38/26);  new base G (2/3);  total (40/29)
Fisher's exact test for biased strand distribution p-value = 6.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.89e-01

ACGCAGGTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCT  >  NC_002947/4170077‑4170369                                                                                                                                                     |                                                                                                                                                  aCGCAGGTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCACGGTCa                                                                                                                                                 >  1:34375/1‑150 (MQ=255)          cTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGa                                                                                                                                        <  1:938298/150‑1 (MQ=255)           tGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGAt                                                                                                                                       >  2:71495/1‑150 (MQ=255)           tGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGAt                                                                                                                                       <  2:1703223/150‑1 (MQ=255)              cgcgCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAg                                                                                                                                    <  1:1448760/150‑1 (MQ=255)              cgcgCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAg                                                                                                                                    <  1:844597/150‑1 (MQ=255)              cgcgCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGGCTTGACCGCGATGAg                                                                                                                                    <  2:1465276/150‑1 (MQ=255)                cgcTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGGCTTGACCGCGATGAGGc                                                                                                                                  <  2:312394/150‑1 (MQ=255)                   tGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGGCTTGACCGCGATGAGGCCga                                                                                                                               <  2:2143538/150‑2 (MQ=255)                       cTGTCGCGTAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGcaca                                                                                                                           <  1:1181720/150‑1 (MQ=255)                        tGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACAt                                                                                                                          >  2:225954/1‑150 (MQ=255)                          tCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATcc                                                                                                                        <  1:71495/150‑1 (MQ=255)                            gcgGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGACGGCTGGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCAt                                                                                                                      >  1:1353245/1‑150 (MQ=255)                            gcgGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTC‑GCTCTGTCCGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCAt                                                                                                                      >  2:500032/1‑150 (MQ=255)                               gAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATGGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATaca                                                                                                                   >  1:738357/1‑150 (MQ=255)                                aaTTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATacaa                                                                                                                  >  1:1863892/1‑150 (MQ=255)                                aaTTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATacaa                                                                                                                  <  1:225954/150‑1 (MQ=255)                                aaTTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATacaa                                                                                                                  <  2:738357/150‑1 (MQ=255)                                  ttCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATACATacaagg                                                                                                                >  2:1979832/1‑150 (MQ=255)                                     gcgGGGCCACGAGAAAGACTAGCCGGGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGACCCTG‑CCGCCAGCGTTTTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATacaaggcac                                                                                                             <  1:2223473/150‑1 (MQ=255)                                            cACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGccc                                                                                                      <  1:1069792/150‑1 (MQ=255)                                            cACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGccc                                                                                                      >  2:2040145/1‑150 (MQ=255)                                                 gaAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCgcgc                                                                                                 >  1:2278184/1‑150 (MQ=255)                                                  aaaGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGcc                                                                                                >  1:2196538/1‑150 (MQ=255)                                                    aGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCAt                                                                                              <  2:1013468/150‑1 (MQ=255)                                                        tAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCtt                                                                                          >  2:1566354/1‑150 (MQ=255)                                                            cGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAATGCCCCGCGCCATGCTTCAAt                                                                                      <  2:36652/150‑1 (MQ=255)                                                                     gCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCg                                                                                                                                <  2:2171417/99‑1 (MQ=255)                                                                     gCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCg                                                                                                                                >  1:2171417/1‑99 (MQ=255)                                                                           gTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCt                                                                       >  2:1712558/1‑150 (MQ=255)                                                                            tCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCGCATCCATACAAGGCACAATGCCCCGCGCCCTGCTTCAATACACAGCCATACCCtt                                                                      >  2:2355034/1‑150 (MQ=255)                                                                            tCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCtt                                                                      >  2:949596/1‑150 (MQ=255)                                                                            tCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGGCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCtt                                                                      >  1:1976007/1‑150 (MQ=255)                                                                              tAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCttt                                                                     <  1:1158765/149‑1 (MQ=255)                                                                              tAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCttt                                                                     >  2:1158765/1‑149 (MQ=255)                                                                              tAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTg                                                                    >  2:2298967/1‑150 (MQ=255)                                                                              tAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTg                                                                    >  1:905789/1‑150 (MQ=255)                                                                               aaTAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGc                                                                   >  1:130257/1‑150 (MQ=255)                                                                                   gagTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAg                                                               <  1:1118992/150‑1 (MQ=255)                                                                                     gTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATTCTTCAATACACAGCCATACCCTTTGCCCAGGa                                                             >  1:981416/1‑150 (MQ=255)                                                                                     gTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGACCACGa                                                             >  1:593797/1‑150 (MQ=255)                                                                                      tGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCAGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGAc                                                            >  1:482181/1‑150 (MQ=255)                                                                                            ttGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAg                                                      >  2:10949/1‑150 (MQ=255)                                                                                              ggAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGcc                                                    >  1:1527371/1‑150 (MQ=255)                                                                                               gAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCGAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCACTACACAGCCATACCCTTTGCCCAGTACGCCGAGccc                                                   <  2:1353245/150‑1 (MQ=255)                                                                                                  ccTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATacaa                                                                                                                  <  2:351628/84‑1 (MQ=255)                                                                                                  ccTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATacaa                                                                                                                  >  1:351628/1‑84 (MQ=255)                                                                                                  ccTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGTACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCa                                                <  1:1979832/150‑1 (MQ=255)                                                                                                  ccTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCa                                                <  1:1566354/150‑1 (MQ=255)                                                                                                    tGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATg                                              >  1:2231077/1‑150 (MQ=255)                                                                                                        aGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAAcc                                          <  1:1668239/150‑1 (MQ=255)                                                                                                            tg‑gctCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCaa                                      >  1:1819815/1‑150 (MQ=255)                                                                                                               gccgatacAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGa                                             <  1:456300/134‑1 (MQ=255)                                                                                                               gccgatacAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGa                                             >  2:456300/8‑141 (MQ=255)                                                                                                                   tGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCt                                <  2:1976007/150‑1 (MQ=255)                                                                                                                       aGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTgcgc                            >  2:901849/1‑150 (MQ=255)                                                                                                                         gcgcAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGcgccg                          >  2:2301856/1‑150 (MQ=255)                                                                                                                             aGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTc                      <  2:2278184/150‑1 (MQ=255)                                                                                                                                 cTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATAcaca                                                                                 >  1:564600/1‑87 (MQ=255)                                                                                                                                 cTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATAcaca                                                                                 <  2:564600/87‑1 (MQ=255)                                                                                                                                     aTCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGaa              >  1:911878/1‑150 (MQ=255)                                                                                                                                      tCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCCCATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGTCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAAc             <  1:2298967/150‑1 (MQ=255)                                                                                                                                         gCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACctg          >  2:973304/1‑150 (MQ=255)                                                                                                                                           cgcATCGCGGGCTTGACCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACctgct        >  2:713829/3‑150 (MQ=255)                                                                                                                                              aTCGCGGTCAAGCCCGCGATGAGGCCGGCACCTCACTCAACACCACCAAGCCCGCAGTCATTCGTCAGTACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGt     >  1:47233/1‑150 (MQ=255)                                                                                                                                              aTCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGt     >  1:78515/1‑150 (MQ=255)                                                                                                                                               tCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTg    >  2:2023364/1‑150 (MQ=255)                                                                                                                                                cgcgGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGc   <  2:1819815/150‑1 (MQ=255)                                                                                                                                                 gcgGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCt  >  1:917672/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                  ACGCAGGTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTG‑GCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCT  >  NC_002947/4170077‑4170369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑