| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,334,374 | C→T | 5.7% | A149T (GCG→ACG) | PP_3806 ← | isochorismatase family hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,334,374 | 0 | C | T | 5.7% | 371.8 / 8.2 | 122 | A149T (GCG→ACG) | PP_3806 | isochorismatase family hydrolase |
| Reads supporting (aligned to +/- strand): ref base C (63/52); new base T (5/2); total (68/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
ACAGCACCAGGGCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGCCG > NC_002947/4334225‑4334519 | aCAGCACCAGGGCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTgcgc > 1:1277951/1‑150 (MQ=255) ggCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCa > 1:32009/1‑150 (MQ=255) cATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGc > 2:1315650/1‑150 (MQ=255) aCCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATgc > 1:1652769/1‑150 (MQ=255) cGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATgcgc > 1:2114863/1‑150 (MQ=255) cGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGAACAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATCCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGGGGCACGCATgcgc > 1:2297218/1‑150 (MQ=255) aaTGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGcc > 1:879456/1‑150 (MQ=255) gCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGc < 2:1652769/150‑1 (MQ=255) cAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGTGCCGCCGGCGCGCaggt > 1:1943110/1‑136 (MQ=255) cAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGTGCCGCCGGCGCGCaggt < 2:1943110/139‑4 (MQ=255) ttCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTgg > 2:584202/1‑150 (MQ=255) ggCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCggg < 1:1127404/150‑1 (MQ=255) gCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCgggg > 1:1727046/1‑150 (MQ=255) gCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCgggg < 2:820564/150‑1 (MQ=255) tGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTg < 2:192426/150‑1 (MQ=255) ttCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCg > 2:485221/1‑150 (MQ=255) aCCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGTCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCt > 1:1681521/1‑150 (MQ=255) aCCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCa < 1:1564930/119‑1 (MQ=255) aCCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCa > 2:1564930/1‑119 (MQ=255) cAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTgctgct < 2:1801926/150‑6 (MQ=255) aggtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAg < 2:1451548/150‑1 (MQ=255) ggtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCgg < 1:1585636/140‑1 (MQ=255) ggtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCgg > 2:54361/1‑140 (MQ=255) ggtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAgg > 2:1535790/1‑150 (MQ=255) gtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGc < 2:196242/137‑1 (MQ=255) gtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGc > 1:196242/1‑137 (MQ=255) gtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGc > 2:1933809/1‑150 (MQ=255) gtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGc > 1:1647684/1‑150 (MQ=255) gtaggtTTTGCTGACGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGc > 2:1195565/1‑150 (MQ=255) ttttGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCt > 1:1437523/1‑150 (MQ=255) tttGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTc < 2:1804880/150‑1 (MQ=255) tGCTGATGTGGCGGAACTGCGGGTGCCCGGCATTCCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGa < 2:1509596/150‑1 (MQ=255) tGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGa < 2:1727046/150‑1 (MQ=255) tGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCa < 2:1337631/136‑1 (MQ=255) tGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCa > 1:1337631/1‑136 (MQ=255) tGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTc < 2:1956773/145‑1 (MQ=255) tGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCAGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTc > 1:1956773/1‑145 (MQ=255) aTGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCtt < 1:925830/110‑1 (MQ=255) aTGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCtt > 2:925830/1‑110 (MQ=255) gCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGTCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAacac < 2:1681521/150‑1 (MQ=255) gAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtg < 2:879456/150‑1 (MQ=255) aaCTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtgc < 1:485221/150‑1 (MQ=255) aaCTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtgc < 2:2114863/150‑1 (MQ=255) tGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtgcttg > 1:133568/1‑150 (MQ=255) ggCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAgc < 2:1822266/149‑1 (MQ=255) ccGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGcc > 2:324085/1‑150 (MQ=255) tGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAac > 1:1165563/1‑125 (MQ=255) tGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAac < 2:1165563/125‑1 (MQ=255) cccATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGcc < 2:918233/134‑1 (MQ=255) ccATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAAGTcttgc > 1:2608/1‑128 (MQ=255) ccATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtgc < 2:2608/128‑1 (MQ=255) ccATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGa < 1:1535790/150‑1 (MQ=255) cATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAg > 2:2384583/1‑150 (MQ=255) aTCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGc > 2:1348177/1‑150 (MQ=255) tCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGGGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCa > 1:1975592/1‑150 (MQ=255) aaTTCGAACACCACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACg < 1:969584/150‑1 (MQ=255) aTTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACgg > 2:2057215/1‑150 (MQ=255) ttCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACg > 2:666050/1‑148 (MQ=255) ttCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACg < 1:666050/148‑1 (MQ=255) ttCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGt > 2:954323/1‑150 (MQ=255) ttCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCCACCACGAACACTTGCTTGCCAAGCGCCAACAGGCCGAGCACGGt > 2:921828/1‑150 (MQ=255) tCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTc < 1:1790010/150‑1 (MQ=255) gAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGa > 2:1601102/1‑104 (MQ=255) gAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGa < 1:1601102/104‑1 (MQ=255) aacaacACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtg > 1:73615/1‑116 (MQ=255) aacaacACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtg < 2:73615/116‑1 (MQ=255) aacaacACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgc > 1:49591/1‑150 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACg < 1:1343892/143‑1 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACg > 2:1343892/1‑143 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgca < 2:133568/150‑1 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgca < 2:1277951/150‑1 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgca < 2:2277686/150‑1 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgca < 1:584202/150‑1 (MQ=255) acacCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgcagca > 1:556271/1‑150 (MQ=255) acacCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgcagca < 2:32009/150‑1 (MQ=255) cacCATCTGGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTCCTGGCCGGGGCGCGGCTGTCGCAGGCATCCTCGACCACGAACCCTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCAc > 2:199172/1‑150 (MQ=255) cacCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCAc > 1:871273/1‑150 (MQ=255) acCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGAc < 2:10731/98‑1 (MQ=255) acCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGAc > 1:10731/1‑98 (MQ=255) cATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCa > 1:1089777/1‑150 (MQ=255) aTCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAg < 1:475681/131‑1 (MQ=255) aTCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAg > 2:475681/1‑131 (MQ=255) aTCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGt < 2:1895228/137‑1 (MQ=255) aTCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGt > 1:1895228/1‑137 (MQ=255) aTCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCaa > 1:1724431/1‑150 (MQ=255) aTCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGACCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGATCACGGTCTGCAGCACGCaa > 1:1329006/1‑150 (MQ=255) tcGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTc < 1:553267/89‑1 (MQ=255) tcGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTc > 2:553267/1‑89 (MQ=255) gTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAATATGGGtt < 1:1533955/150‑1 (MQ=255) gTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATgg > 1:587586/1‑147 (MQ=255) gTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATgg < 2:587586/147‑1 (MQ=255) tCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGttt > 2:2110772/1‑150 (MQ=255) tCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTATAGGACGCAAACATGGGttt > 1:1930820/1‑150 (MQ=255) tCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGCTCTGCAGCACGCAAACATGGGttt < 1:921828/150‑1 (MQ=255) cTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCt < 1:2319139/64‑1 (MQ=255) cTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCt > 2:2319139/1‑64 (MQ=255) cTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGcc > 1:1877952/1‑150 (MQ=255) atGCGTGCCGCCGGCGCGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCg < 1:1901725/75‑1 (MQ=255) atGCGTGCCGCCGGCGCGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGcc > 2:1015044/2‑150 (MQ=255) tGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGCCg < 1:2306949/150‑1 (MQ=255) | ACAGCACCAGGGCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGCCTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGCCG > NC_002947/4334225‑4334519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |