| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,334,379 | G→C | 5.5% | A147G (GCC→GGC) | PP_3806 ← | isochorismatase family hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,334,379 | 0 | G | C | 5.5% | 379.0 / 8.7 | 122 | A147G (GCC→GGC) | PP_3806 | isochorismatase family hydrolase |
| Reads supporting (aligned to +/- strand): ref base G (61/51); new base C (5/2); total (68/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 126 total aligned reads displayed.
ACCAGGGCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGCCGCAGACGATC > NC_002947/4334230‑4334528 | ggCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCa > 1:32009/1‑150 (MQ=255) aCCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATgc > 1:1652769/1‑150 (MQ=255) cGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATgcgc > 1:2114863/1‑150 (MQ=255) cGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGAACAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATCCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGGGGCACGCATgcgc > 1:2297218/1‑150 (MQ=255) aaTGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGcc > 1:879456/1‑150 (MQ=255) gCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGc < 2:1652769/150‑1 (MQ=255) gCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGACAgcc > 2:1030197/1‑148 (MQ=255) cAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGTGCCGCCGGCGCGCaggt < 2:1943110/139‑4 (MQ=255) cAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGTGCCGCCGGCGCGCaggt > 1:1943110/1‑136 (MQ=255) cGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑Ct > 2:1790010/1‑150 (MQ=255) ttCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTgg > 2:584202/1‑150 (MQ=255) ggCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCggg < 1:1127404/150‑1 (MQ=255) gCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCgggg > 1:1727046/1‑150 (MQ=255) gCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCgggg < 2:820564/150‑1 (MQ=255) tGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTg < 2:192426/150‑1 (MQ=255) ttCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCg > 2:485221/1‑150 (MQ=255) aCCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGTCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCt > 1:1681521/1‑150 (MQ=255) aCCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCa < 1:1564930/119‑1 (MQ=255) aCCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCt > 2:1957639/1‑150 (MQ=255) cAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTgctgct < 2:1801926/150‑6 (MQ=255) aggtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAg < 2:1451548/150‑1 (MQ=255) ggtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCgg < 1:54361/140‑1 (MQ=255) ggtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCgg < 1:1585636/140‑1 (MQ=255) ggtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCgg > 2:1585636/1‑140 (MQ=255) ggtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCgg > 2:54361/1‑140 (MQ=255) ggtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAgg > 2:1535790/1‑150 (MQ=255) gtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGc > 1:196242/1‑137 (MQ=255) gtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGc < 2:196242/137‑1 (MQ=255) gtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGc > 1:1647684/1‑150 (MQ=255) gtaggtTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGc > 2:1933809/1‑150 (MQ=255) gtaggtTTTGCTGACGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGc > 2:1195565/1‑150 (MQ=255) tagggTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCa > 2:646709/1‑150 (MQ=255) ttttGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCt > 1:1437523/1‑150 (MQ=255) tttGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTc < 2:1804880/150‑1 (MQ=255) tGCTGATGTGGCGGAACTGCGGGTGCCCGGCATTCCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGa < 2:1509596/150‑1 (MQ=255) tGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCa < 2:1337631/136‑1 (MQ=255) tGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCa > 1:1337631/1‑136 (MQ=255) tGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCAGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTc > 1:1956773/1‑145 (MQ=255) aTGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑Ctt > 2:925830/1‑110 (MQ=255) gCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGTCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAacac < 2:1681521/150‑1 (MQ=255) gAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtg < 2:879456/150‑1 (MQ=255) aaCTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtgc < 2:2114863/150‑1 (MQ=255) aaCTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtgc < 1:485221/150‑1 (MQ=255) tGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtgcttg > 1:133568/1‑150 (MQ=255) ggCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAgc < 2:1822266/149‑1 (MQ=255) tGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAac > 1:1165563/1‑125 (MQ=255) tGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAac < 2:1165563/125‑1 (MQ=255) cccATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGcc > 1:918233/1‑134 (MQ=255) ccATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAAGTcttgc > 1:2608/1‑128 (MQ=255) ccATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtgc < 2:2608/128‑1 (MQ=255) ccATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGa < 1:1535790/150‑1 (MQ=255) cATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAg > 2:2384583/1‑150 (MQ=255) tCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGTCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCa > 1:2122493/1‑150 (MQ=255) aaTTCGAACACCACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACg < 1:969584/150‑1 (MQ=255) ttCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACg < 1:666050/148‑1 (MQ=255) ttCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGt > 2:954323/1‑150 (MQ=255) ttCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGt < 2:1437523/150‑1 (MQ=255) ttCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCCACCACGAACACTTGCTTGCCAAGCGCCAACAGGCCGAGCACGGt > 2:921828/1‑150 (MQ=255) tCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTc < 1:1790010/150‑1 (MQ=255) gAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCgg < 2:281640/65‑1 (MQ=255) gAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCgg > 1:281640/1‑65 (MQ=255) gAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGa < 1:1601102/104‑1 (MQ=255) gAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGa > 2:1601102/1‑104 (MQ=255) gAACAACACCAGCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCGCGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTg > 2:2211340/1‑150 (MQ=255) aacaacACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACActtg < 2:73615/116‑1 (MQ=255) aacaacACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgc > 1:49591/1‑150 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACg < 1:1343892/143‑1 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACg > 2:1343892/1‑143 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgca < 2:2277686/150‑1 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgca < 1:584202/150‑1 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgca < 2:133568/150‑1 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgca < 2:1277951/150‑1 (MQ=255) acaacaCCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgca < 1:646709/150‑1 (MQ=255) acacCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCCTGCGGGCACACCCTACGGCACACTCT‑TCCCGTGTGCGGCGGTCTTAGGCATTCTCGATCACTAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgcagca < 2:881234/150‑1 (MQ=255) acacCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTgcagca < 2:32009/150‑1 (MQ=255) cacCATCTGGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTCCTGGCCGGGGCGCGGCTGTCGCAGGCATCCTCGACCACGAACCCTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCAc > 2:199172/1‑150 (MQ=255) cacCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCAc > 1:871273/1‑150 (MQ=255) acCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGAc > 1:10731/1‑98 (MQ=255) cATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCa > 1:1089777/1‑150 (MQ=255) cATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCa > 2:1327748/1‑150 (MQ=255) aTCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAg > 2:475681/1‑131 (MQ=255) aTCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGt > 1:1895228/1‑137 (MQ=255) aTCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCaa > 1:1724431/1‑150 (MQ=255) aTCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGACCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGATCACGGTCTGCAGCACGCaa > 1:1329006/1‑150 (MQ=255) tcGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTc < 1:553267/89‑1 (MQ=255) gTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAATATGGGtt < 1:1533955/150‑1 (MQ=255) gTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATgg > 1:587586/1‑147 (MQ=255) gTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATgg < 2:587586/147‑1 (MQ=255) tCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGttt > 2:2110772/1‑150 (MQ=255) tCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTATAGGACGCAAACATGGGttt > 1:1930820/1‑150 (MQ=255) tCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGCTCTGCAGCACGCAAACATGGGttt < 1:921828/150‑1 (MQ=255) cTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCt < 1:2319139/64‑1 (MQ=255) cTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGcc > 1:1877952/1‑150 (MQ=255) atGCGTGCCGCCGGCGCGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCg > 2:1901725/2‑76 (MQ=255) atGCGTGCCGCCGGCGCGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCg < 1:1901725/75‑1 (MQ=255) atGCGTGCCGCCGGCGCGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGcc > 2:533974/2‑150 (MQ=255) atGCGTGCCGCCGGCGCGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGcc > 2:1015044/2‑150 (MQ=255) cggcggCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGCCGCAGACGa < 2:1089777/150‑1 (MQ=255) ggcggcACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGCCGCAGACGAt < 2:556271/150‑1 (MQ=255) gcggcACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGCCGCAGACGATc < 1:199172/150‑1 (MQ=255) | ACCAGGGCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGGGTCACTACCTGCGCGCCGGCGGCACGCATGCGCGCCAGGCCTGCGGC‑CTTGCTGGCCGGGGTGCGGCTGTCGCAGGCATCCTCGACCACGAACACTTGCTTGCCCAGCGCCAACAGGCCGAGCACGGTCTGCAGCACGCAAACATGGGTTTCCATGCCGCAGACGATC > NC_002947/4334230‑4334528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |