| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,365,209 | G→T | 6.3% | intergenic (‑26/‑47) | PP_3841 ← / → PP_3842 | MerR family transcriptional regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,365,209 | 0 | G | T | 6.3% | 355.9 / 9.6 | 111 | intergenic (‑26/‑47) | PP_3841/PP_3842 | MerR family transcriptional regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (53/50); new base T (3/4); total (57/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.50e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
TTCACTGTAACTGCGATAGTTGTTGGCTTGTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCG > NC_002947/4365064‑4365356 | ttCACTGTAACTGCGATAGTTGTTGGCTTGTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGctc > 1:138968/1‑150 (MQ=255) aCTGTAACTGCGATAGTTGTTGGCTTGTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTac > 1:1465958/1‑150 (MQ=255) aCTGTAACTGCGATAGTTGTTGGCTTGTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCAATCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTac > 1:99086/1‑150 (MQ=255) tGTAACTGCGCTAGTTGTGAGCTGGTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCATTGTAGGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTacac < 1:532654/150‑1 (MQ=255) aCTGCGATAGTTGTTGGCTTGTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCCTGCTCTacagtcac < 1:349338/150‑6 (MQ=255) aCTGCGATAGTTGTTGGCTTGTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACATCTTa < 2:2247259/150‑1 (MQ=255) aCTGCGATAGTTGTTGGCTTGTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTa < 2:1076461/150‑1 (MQ=255) aCTGCGATAGTTGTTGGCTTGTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATAAAAAAAAAAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTa < 2:1542811/150‑1 (MQ=255) cTGCGATAGTTGTTGGCTTGTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCCTGCTCTacagtcaag < 1:443776/150‑7 (MQ=255) tGTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCaa < 1:858984/150‑1 (MQ=255) gTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCaaa < 1:1858263/150‑1 (MQ=255) gtgtGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAg < 2:1465958/150‑1 (MQ=255) gCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTc > 1:1676773/1‑150 (MQ=255) gCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTc > 1:861581/1‑150 (MQ=255) cTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCa > 2:1453627/1‑150 (MQ=255) tCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAgg > 2:1767516/1‑144 (MQ=255) gATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCt < 1:2318720/115‑1 (MQ=255) gATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCt > 2:2318720/1‑115 (MQ=255) gATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAAc > 1:2309650/1‑150 (MQ=255) cGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAgtgt > 1:2048937/1‑150 (MQ=255) gAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCT‑CAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTgg > 1:627746/1‑150 (MQ=255) gCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGa < 2:2309650/150‑1 (MQ=255) ttCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGt > 2:1927614/1‑129 (MQ=255) ttCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGt < 1:1927614/129‑1 (MQ=255) gTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCttt < 2:50284/150‑1 (MQ=255) tAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTg < 1:1991083/150‑1 (MQ=255) aTAGCGCAATGTATGGCGGCTGAGCCCACTACGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAAGCTCTACACCTTAGCCTGCGCCCATCATTAAAACAAGGGATCAAACATGAGTGTGGAATGCCTTGTc > 2:754998/1‑150 (MQ=255) gcAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGa < 1:1323990/128‑1 (MQ=255) gcAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGa > 2:1323990/1‑128 (MQ=255) cAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAg < 1:1842314/135‑1 (MQ=255) cAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACcggc > 2:692197/1‑150 (MQ=255) catgttgggcggcTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACcggcg < 2:668072/143‑1 (MQ=255) tGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCg > 2:915585/1‑150 (MQ=255) gcggcTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGtgtg > 2:1360587/1‑123 (MQ=255) gcggcTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGc > 1:247601/1‑150 (MQ=255) ggcTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCtt < 2:1629178/150‑1 (MQ=255) gcTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCttt > 2:1483426/1‑150 (MQ=255) gAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAg > 1:1574318/1‑113 (MQ=255) gAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTtgtg < 1:1483426/150‑1 (MQ=255) aGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTgg > 2:2114431/1‑150 (MQ=255) aGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTgg < 2:308550/150‑1 (MQ=255) cccACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTgggg > 2:1370679/1‑150 (MQ=255) cACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAAAAGGAGGGTGGAGTGCGTGGGCACCGGGGGCAGCGGCTTTGTggggaa > 2:1601025/1‑148 (MQ=255) aCTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCCTGCTCTacag > 1:1765716/1‑64 (MQ=255) aCTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCCTGCTCTacag < 2:1765716/65‑2 (MQ=39) cTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTTGGGCAAc < 2:1676773/150‑1 (MQ=255) gcTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGc > 2:1118561/1‑63 (MQ=255) gcTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGc < 1:1118561/63‑1 (MQ=255) tCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCttt < 2:693899/110‑1 (MQ=255) tCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCttt > 1:693899/1‑110 (MQ=255) ccAACTCTCCAATATTCACGTTAAAAATTCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGc > 1:1261651/1‑150 (MQ=255) cAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTGGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACcg > 2:1564636/1‑115 (MQ=255) cAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACcg < 1:1564636/115‑1 (MQ=255) cAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGcc > 2:549642/1‑150 (MQ=255) cAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGcc > 2:1074476/1‑150 (MQ=255) aaCTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCg > 2:506746/1‑150 (MQ=255) aCTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCgg > 2:1088145/1‑150 (MQ=255) tcCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCtt < 1:1088145/150‑1 (MQ=255) tcCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCtt > 1:1198050/1‑150 (MQ=255) tcCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCtt > 2:324752/1‑150 (MQ=255) tcCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTCGGGCAACATTTGCTGGCCGGTCtt > 2:749894/1‑150 (MQ=255) cAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCca > 2:289833/1‑60 (MQ=255) cAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCca < 1:289833/60‑1 (MQ=255) aaTATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTg > 2:2355317/1‑95 (MQ=255) aaTATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTg < 1:2355317/95‑1 (MQ=255) tatTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTgc > 2:2180200/1‑150 (MQ=255) tatTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTgc < 1:2180200/150‑1 (MQ=255) aCGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCg < 2:769140/135‑1 (MQ=255) aCGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCg > 1:769140/1‑135 (MQ=255) cGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAgg < 1:1130658/150‑1 (MQ=255) cGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAgg > 2:1810480/1‑150 (MQ=255) cGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAgg < 1:2114431/150‑1 (MQ=255) gTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAggg < 1:1074476/150‑1 (MQ=255) ttAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCt < 1:1211124/87‑1 (MQ=255) ttAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCt < 1:1211201/87‑1 (MQ=255) ttAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCt > 2:1211124/1‑87 (MQ=255) ttAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTtgt < 1:652878/112‑1 (MQ=255) ttAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTtgt > 2:652878/1‑112 (MQ=255) tCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGAc < 1:1453627/150‑1 (MQ=255) ttGACTGTAGAGCAGGCTCTACACGTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTg > 2:1835813/1‑150 (MQ=255) ttGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTg > 2:265979/1‑150 (MQ=255) ttGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTg > 2:446006/1‑150 (MQ=255) ttGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTg > 2:1784036/1‑150 (MQ=255) ttGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTg > 2:1851656/1‑150 (MQ=255) ttGACTGTAGAGCAGGCTCTACACAGTATCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTg > 1:933621/1‑150 (MQ=255) taaggtGTAGAGCCTGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTg > 2:1382095/6‑150 (MQ=255) tGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTgg < 1:915585/150‑1 (MQ=255) tGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTgg < 1:692197/150‑1 (MQ=255) tGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTgg < 2:627746/150‑1 (MQ=255) gtGTAGAGCCTGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGc < 2:1713064/102‑1 (MQ=255) gtGTAGAGCCTGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGc > 1:1713064/2‑103 (MQ=255) gTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCt < 2:247601/150‑1 (MQ=255) gTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCt < 1:446006/150‑1 (MQ=255) tAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACCAGGGTTCAAACATGAGTGTGGAGTGCttt < 1:1068050/72‑1 (MQ=255) tAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCttt > 2:1068050/1‑72 (MQ=255) tAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGcac > 1:2405403/1‑135 (MQ=255) gagCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCttt > 2:2156463/1‑70 (MQ=255) gagCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCttt < 1:2156463/70‑1 (MQ=255) gCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATgc < 1:754998/150‑1 (MQ=255) cAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATgcg > 1:1785657/1‑150 (MQ=255) | TTCACTGTAACTGCGATAGTTGTTGGCTTGTCGGTGTGGCTCGATAAGCCCGAGCTGTTCGTAATAGCGCAATGTATGGCGGCTGAGCCCACTCCGGCGCTCCAACTCTCCAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCG > NC_002947/4365064‑4365356 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |