| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,382,865 | G→A | 5.9% | intergenic (‑32/+230) | PP_3857 ← / ← PP_3858 | hypothetical protein/tail fiber protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,382,865 | 0 | G | A | 5.9% | 359.9 / 8.5 | 119 | intergenic (‑32/+230) | PP_3857/PP_3858 | hypothetical protein/tail fiber protein |
| Reads supporting (aligned to +/- strand): ref base G (62/50); new base A (5/2); total (67/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.90e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
TATCGACACCGCCGTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCG > NC_002947/4382722‑4383014 | tATCGACACCGCCGTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCgg < 1:2039106/150‑1 (MQ=255) cGACACCGCCGTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGtt > 1:2383229/1‑150 (MQ=255) gACACCGCCGTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGttt < 1:1568898/150‑1 (MQ=255) acacCGCCGTTGACATAGACATGCTGCAGCTTCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCgg < 1:869234/145‑1 (MQ=255) acacCGCCGTTGACATAGACATGCTGCAGCTCCGACGTGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTg > 1:1945525/1‑150 (MQ=255) acacCGCCGTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCgg > 2:869234/1‑145 (MQ=255) cacCGCCGTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAGCAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCACGGCGGGttttt < 1:890791/150‑3 (MQ=255) cgccgTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTCGCTTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTc > 1:1833892/1‑150 (MQ=255) ccgTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCaa > 2:1485908/1‑150 (MQ=255) gACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGAt < 2:243127/150‑1 (MQ=255) gACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGAt < 2:1806121/150‑1 (MQ=255) aCATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGAtt < 1:2284775/150‑1 (MQ=255) aCATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTACTCAAGGAATCAAAAAACCCGCCGTGGCGGGTTTTGGTCAAACGAtt > 1:1965404/1‑150 (MQ=255) cATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGAttt > 2:432713/1‑150 (MQ=255) cATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGAttt > 2:432451/1‑150 (MQ=255) aGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGttt > 1:828703/1‑133 (MQ=255) aGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGttt < 2:828703/133‑1 (MQ=255) aGACATGCTGCAGCTCAGCCGCGATATTGGCTTGCGTTGCCGAGTCGTTGATCTTCCCTTAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAg < 2:1833892/150‑1 (MQ=255) aCATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCa > 2:1587133/1‑150 (MQ=255) aTGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAgg > 1:2199068/1‑150 (MQ=255) aTGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAgg < 1:1485908/150‑1 (MQ=255) ctgcAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTc < 1:432451/150‑1 (MQ=255) ctgcAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTc < 1:432713/150‑1 (MQ=255) tgcAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCg < 1:1898111/150‑1 (MQ=255) gCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGt > 1:557331/1‑125 (MQ=255) gCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGt < 2:557331/125‑1 (MQ=255) gCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTAc < 1:1923354/150‑1 (MQ=255) cTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTAcg > 2:1929859/1‑150 (MQ=255) tCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTAcgc > 1:2027660/1‑150 (MQ=255) gcTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGct > 1:2057096/1‑150 (MQ=255) ctctTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGctc < 2:2383229/150‑1 (MQ=255) tctTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGctct > 1:1546320/1‑150 (MQ=255) ttGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTAAATGCATCAAAAAACCCGCCGTGGCGGGTTAGCGGCATTCGATTGGAGCAGGCTCGTTACGCGTCACGCTCTAc > 1:1141605/1‑150 (MQ=255) gATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCAAGCTCTACAGc > 1:968924/1‑150 (MQ=255) ttgcattgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGa > 2:300908/1‑150 (MQ=255) ttgcattgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGa < 1:1412743/150‑1 (MQ=255) gcattgcCGCTTCGGACAACAGTCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGAtt < 1:338007/150‑1 (MQ=255) cattgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGAttt > 2:503669/1‑113 (MQ=255) cattgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGAttt < 1:503669/113‑1 (MQ=255) ccGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCg > 1:308715/1‑150 (MQ=255) ggACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGcat > 2:479043/1‑150 (MQ=255) gACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGcatc > 2:2213325/1‑150 (MQ=255) caGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATcgg > 1:1615554/1‑150 (MQ=255) ccTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCggcggc < 2:2002436/150‑1 (MQ=255) cTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGAtt < 1:1739049/89‑1 (MQ=255) cTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGc > 1:400262/1‑122 (MQ=255) cTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGc < 2:400262/122‑1 (MQ=255) cTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGgcggcg > 2:2229885/1‑150 (MQ=255) tGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGa < 2:1689423/150‑1 (MQ=255) tGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGa < 1:1929859/150‑1 (MQ=255) gAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGTATCAAAAATCCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAg < 1:1722312/150‑1 (MQ=255) gAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCCTCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAg < 2:1615554/150‑1 (MQ=255) gAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGTTTTGGGCTACTCGACTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAg > 1:1150155/1‑150 (MQ=255) gAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAg < 1:2213325/150‑1 (MQ=255) ggCTTCCAAAGCTGAAACATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGtt < 2:1965404/150‑1 (MQ=255) gCTTACAAAGCTGAGATATCAGTCAGTCACGTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGCGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGttt > 2:1353483/1‑150 (MQ=255) cTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTa < 2:1958544/150‑1 (MQ=255) ttCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTAc > 2:1378176/1‑150 (MQ=255) aaGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTa < 1:732380/150‑1 (MQ=255) tGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCa > 1:2149650/1‑150 (MQ=255) tatCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACg > 2:1240180/1‑150 (MQ=255) atCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGt > 2:1300816/1‑150 (MQ=255) atCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGACCGCCAGca > 2:1884328/1‑113 (MQ=255) aGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTcat < 1:1721021/150‑1 (MQ=255) ttCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTg > 2:687573/1‑94 (MQ=255) ttCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTg < 1:687573/94‑1 (MQ=255) ttCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATc > 2:1502742/1‑98 (MQ=255) ttCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATc < 1:1502742/98‑1 (MQ=255) ttCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTcatccatc > 2:2097124/1‑150 (MQ=255) ttCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACACAAAACGTcatccatc > 1:1388106/1‑150 (MQ=255) acctttCTCCAGCCAGCAAAAAACCCGCCGTGGCGGGTTTGGTTCAAAAGAGTTGAGCAGGCTCGGCACGCGTCACGCGATACAACGCCGGGATCGCCAGCCACAAGAGCGGCGAGCTGTGTACCAGTACCCAACACTTCATACATCAAt > 2:798106/4‑150 (MQ=255) aCTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGcc < 2:417171/98‑1 (MQ=255) aCTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGcc > 1:417171/1‑98 (MQ=255) tctcCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTc < 2:1896294/150‑1 (MQ=255) cAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAAGGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGa > 1:1508014/1‑150 (MQ=255) aGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGtt > 1:1643714/1‑57 (MQ=255) aGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGtt < 2:1643714/57‑1 (MQ=255) aGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGAc < 2:2199068/150‑1 (MQ=255) gCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGc > 2:1322750/1‑150 (MQ=255) aTCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCAt < 1:2311528/143‑1 (MQ=255) tCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCa > 1:627083/1‑150 (MQ=255) tCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCa > 2:2405789/1‑150 (MQ=255) tCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCa < 1:565580/150‑1 (MQ=255) cAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCAt > 1:2279416/1‑150 (MQ=255) ccaaaCCCGCCACGGCGGGTTTTGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTc > 1:1363987/3‑150 (MQ=255) ccaaaCCCGCCACGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTc > 1:1042395/3‑150 (MQ=255) ccaaaCCCGCCACGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTc > 1:1464423/3‑150 (MQ=255) aaaaaCCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTc > 2:1148165/1‑150 (MQ=255) aaaaaCCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTc < 1:300908/150‑1 (MQ=255) aaaaaCCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTc < 1:1587133/150‑1 (MQ=255) caaaCCCGCCACGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGTAAAACGTCATCCATCAATGCTTCATGACGCTCATTCg > 1:738735/2‑150 (MQ=255) caaaCCCGCCACGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCg > 1:261422/2‑150 (MQ=255) aaCCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTg > 1:1081928/1‑150 (MQ=255) aCCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGa < 2:1141605/150‑1 (MQ=255) ccgccgTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGc > 1:2160700/1‑150 (MQ=255) cgccgTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAAt < 1:539723/125‑1 (MQ=255) cgccgTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAAt > 2:539723/1‑125 (MQ=255) gccgTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTATCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCgg < 2:1470466/150‑1 (MQ=255) ccgTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGc < 2:1081928/150‑1 (MQ=255) gTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCg > 2:1433167/1‑150 (MQ=255) | TATCGACACCGCCGTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCG > NC_002947/4382722‑4383014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |