| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,410,822 | G→C | 7.1% | H121Q (CAC→CAG) | PP_3894 ← | replication protein O |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,410,822 | 0 | G | C | 7.1% | 219.1 / 7.5 | 70 | H121Q (CAC→CAG) | PP_3894 | replication protein O |
| Reads supporting (aligned to +/- strand): ref base G (36/29); new base C (2/3); total (38/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.70e-01 | |||||||||||
GAGGGGTTGCCTTGTCGTTGCCGTGACCGCCTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATCGCCCGAGACACGTTGGCGCGCT > NC_002947/4410674‑4410967 | gAGGGGTTGCCTTGTCGTTGCCGTGACCGCCTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAgt > 2:700709/1‑150 (MQ=255) ggggTTGCCTTGTCGTTGCCGTGACCGCCTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAgtgt < 1:920013/150‑1 (MQ=255) gggTTGCCTTGTCGTTGCCGTGACCGCCTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAgtgtg < 1:363168/150‑1 (MQ=255) gTTGCCTTGTCGTTGCCGTGACCGCCTTCCGCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTa > 2:715222/1‑150 (MQ=255) ccTTGTCGTTGCCGTGACCGCCTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGAtt > 2:1082235/1‑150 (MQ=255) ttGTCGTTGCCGTGACCGCCTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAgtgtg > 2:1688243/1‑142 (MQ=255) ttGTCGTTGCCGTGACCGCCTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAgtgtg < 1:1688243/142‑1 (MQ=255) ttGTCGTTGCCGTGACCGCCTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGCGTAGATTTc > 2:1492206/1‑150 (MQ=255) gTCGTTGCCGTGACCGCCTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACACTGTGTAGaaaacac < 2:1321845/150‑7 (MQ=255) ttGCCGTGACCGCCTTCCTCGGCGCCAGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACg < 2:1639000/150‑1 (MQ=255) ccGTGACCGCCTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGCGTAGATTTCAACACGGtt < 1:1492206/150‑1 (MQ=255) cGTGACCGCCTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTCTGTGTGTCAGTGTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTg < 2:2133241/150‑1 (MQ=255) aCCGCCTTCCTCGGCGCCGGTTGGTGAGGAGGCGTCGACAACCAATGCGTTAGCCTTACTAGATTTCCGTCTTTGGTTTAGGCGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCtt < 1:655939/150‑1 (MQ=255) ccTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACATAGTGTGTAGATTTCAACACGGTTGGCTTGCTg > 1:1453057/1‑150 (MQ=255) ccTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTg > 1:2352547/1‑150 (MQ=255) cTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCt > 2:15040/1‑148 (MQ=255) cTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCt < 1:15040/148‑1 (MQ=255) gcCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCa < 1:290858/150‑1 (MQ=255) gcCGGTCGATGCGGATGCGTCGACAACCAATGCGTCAGCATTGGTATTTGTATTTCTGTCTATTATGTGTGTACTTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTAGCTTGCTGTCGATTCTccc > 2:180177/1‑149 (MQ=255) gTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCa > 2:2088589/1‑150 (MQ=255) gatgcggatgcgTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACAGAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGt > 1:530937/1‑150 (MQ=255) gatgcggatgcgTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGt > 1:988143/1‑150 (MQ=255) gatgcggatgcgTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGt < 1:1082235/150‑1 (MQ=255) tgcggatgcgTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTAc < 1:2088589/150‑1 (MQ=255) cggatgcgTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCg < 2:2128256/150‑1 (MQ=255) atgcgTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCt < 1:1598854/124‑1 (MQ=255) atgcgTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCt > 2:1598854/1‑124 (MQ=255) tCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGaaa < 2:48655/150‑1 (MQ=255) gACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTCATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTGGAGCACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAgg < 2:944093/150‑2 (MQ=255) aaCCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGaaa < 1:2096330/145‑1 (MQ=255) aaCCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGaaa > 2:2096330/1‑145 (MQ=255) aCCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGAtt < 2:280518/150‑1 (MQ=255) aCCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGAtt > 2:1374711/1‑150 (MQ=255) cAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAgt > 2:2279624/1‑83 (MQ=255) cAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAgt < 1:2279624/83‑1 (MQ=255) aaTGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGAttt < 1:1362158/92‑1 (MQ=255) aaTGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGAttt > 2:1362158/1‑92 (MQ=255) gTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAgtg > 1:1328080/1‑78 (MQ=255) gTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAgtg < 2:1328080/78‑1 (MQ=255) aacgCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTg < 1:1886979/94‑1 (MQ=255) aacgCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTg > 2:1886979/4‑97 (MQ=255) atttgtatttCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGt > 1:1202544/1‑95 (MQ=255) atttgtatttCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGt < 2:1202544/95‑1 (MQ=255) ttgtatttCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATcgc < 1:700709/150‑1 (MQ=255) tgtatttCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATcgcg > 2:1622991/1‑150 (MQ=255) ttCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTACCGCCATCGCGGaaaa < 1:715222/150‑1 (MQ=255) gTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACAAAGTGTGTAGATTTAAACAGGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGGAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAGGCAc > 2:516504/1‑150 (MQ=255) gcTTTTTTGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCAcg > 2:1611041/2‑150 (MQ=255) aTGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGa < 1:1374711/150‑1 (MQ=255) tgtAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGa > 2:2179216/1‑74 (MQ=255) tgtAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGa < 1:2179216/74‑1 (MQ=255) tgtAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGAt > 2:734852/1‑150 (MQ=255) tgtAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGAt > 2:68224/1‑150 (MQ=255) tAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATCTCGACAGTGGTGGTTTCCTTAAAAATCTCAACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCa > 2:295717/1‑150 (MQ=255) aaTTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGATTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCaa < 1:1651106/150‑1 (MQ=255) aTTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGGAAAGCACGCGCTGACGGATCAAc > 1:985103/1‑150 (MQ=255) ttttCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACg > 1:2079448/1‑150 (MQ=255) ttCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGaa < 2:540681/150‑1 (MQ=255) gtCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGaa > 2:1845221/2‑150 (MQ=255) acacAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGa < 1:734852/150‑1 (MQ=255) acaGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATc < 2:2352547/150‑1 (MQ=255) acaGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGGTGGCTTCCTGTCAATTCTCAACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATc > 2:233925/1‑150 (MQ=255) aGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATCGc < 1:1611041/150‑1 (MQ=255) ttgtTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATCGCCCGAGACACg > 1:1552383/2‑150 (MQ=255) gtgtTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATCGCCCGAGACACg > 1:702086/1‑150 (MQ=255) gggtTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATCGCCCGAGACACg > 1:1383251/3‑150 (MQ=255) tgtTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATCGCCCGAGacac > 2:889774/1‑148 (MQ=255) tgtTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATCGCCCGAGacac < 1:889774/148‑1 (MQ=255) atCTACACACTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTg > 1:562361/2‑114 (MQ=255) atCTACACACTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTg < 2:562361/113‑1 (MQ=255) atCTACACACTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAAc < 1:1982115/123‑1 (MQ=255) atCTACACACTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAAc > 2:1982115/2‑124 (MQ=255) tCTACACAGTGTGTAGATCTCAGCACTGGCGGCTTCCTGTCAATTCTCCACTCAGGTACAGGTCGGAAAGACATTGAATCACGACTGCCGCCATCCCCGAGAAGCACGCGCTGACGTAGCAACAACTTCATCTCGCGAGACAAGTTGgcg > 2:746167/1‑150 (MQ=255) tACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATCGCCCGAGACACGTTGgcgcg > 1:1272991/1‑150 (MQ=255) cacaGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATCGCCCGAGACACGTTGGCGCGCt > 2:2010973/1‑150 (MQ=255) acaGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCg < 1:1756979/56‑1 (MQ=255) acaGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCg > 2:1756979/1‑56 (MQ=255) acaGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATCGCCCGAGac > 1:976232/1‑136 (MQ=255) acaGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATCGCCCGAGac < 2:976232/136‑1 (MQ=255) | GAGGGGTTGCCTTGTCGTTGCCGTGACCGCCTTCCTCGGCGCCGGTCGATGCGGATGCGTCGACAACCAATGCGTTAGCATTGGTATTTGTATTTCTGTCTTTTATGTGTGTAATTTTCAACACAGTGGCAGGGGTGTTTTCTACACAGTGTGTAGATTTCAACACGGTTGGCTTGCTGTCGATTCTCCACTCAGGTACCGGTAGGAAAGTGATTGGGTCGCGACTGCCGCCATCGCGGAAAAGCACGCGCTGACGGATCAACGAATTGATCGCCCGAGACACGTTGGCGCGCT > NC_002947/4410674‑4410967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |