| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,479,863 | T→A | 5.6% | A390A (GCT→GCA) | ybdR → | Zn‑dependent oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,479,863 | 0 | T | A | 5.6% | 287.0 / 6.3 | 90 | A390A (GCT→GCA) | ybdR | Zn‑dependent oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (42/43); new base A (3/2); total (45/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.24e-01 | |||||||||||
CCCGAACTGCTGGAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGA > NC_002947/4479714‑4480010 | cccGAACTGCTGGAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGtgct < 2:947504/150‑1 (MQ=255)cccGAACTGCTGGAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGACAGGtgct < 1:1038489/150‑1 (MQ=255) cGAACTGCTGGAGCACATCGCAGCAGGGCGCCTGCAACCCGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCACGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGtgctgc < 2:1026370/150‑1 (MQ=255) cGAACTGCTGGAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGtgctgc > 2:923791/1‑150 (MQ=255) ctgGAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGc < 2:2102038/150‑1 (MQ=255) ggAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCAc < 2:254644/150‑1 (MQ=255) gAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCAcc > 2:1588376/1‑150 (MQ=255) cacaTCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTg < 1:274843/150‑1 (MQ=255) aTCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGc > 2:145442/1‑150 (MQ=255) tCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGcc > 1:1680231/1‑150 (MQ=255) gAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCt > 2:1528824/1‑150 (MQ=255) cAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGacc < 2:1935174/150‑1 (MQ=255) tGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTaga < 1:1989225/150‑1 (MQ=255) aaCCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAgagga < 1:391123/150‑1 (MQ=255) aaCCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAgagga > 1:1533796/1‑150 (MQ=255) cGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCGGGTGCAGCAc > 2:2398364/1‑114 (MQ=255) cGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCGGGTGCAGCAc < 1:2398364/114‑1 (MQ=255) ggAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTaga > 1:544293/1‑143 (MQ=255) ggAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTaga < 2:544293/143‑1 (MQ=255) ggAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGaa < 1:334549/150‑1 (MQ=255) ggAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGaa > 1:1678071/1‑150 (MQ=255) ggAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGaa < 1:1588376/150‑1 (MQ=255) cTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGAACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGAt < 2:857499/150‑1 (MQ=255) tGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTTCCAGGTGCTGCACCCTGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATc > 1:398324/1‑150 (MQ=255) gATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCa > 2:623267/1‑150 (MQ=255) gTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCGGGTGCAGCACCTGGCAcga < 2:2124894/112‑3 (MQ=255) gTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCGGGTGCAGCACCTGGCAcga > 1:2124894/1‑110 (MQ=255) ttACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAAc < 2:364380/150‑1 (MQ=255) tACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACg < 1:145442/150‑1 (MQ=255) tCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACct < 2:710864/123‑1 (MQ=255) tCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACct > 1:710864/1‑123 (MQ=255) aCCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGtctc < 2:1680231/150‑1 (MQ=255) gCCCGAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGCTa < 1:2401613/150‑1 (MQ=255) cccTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTagag < 1:2232641/118‑1 (MQ=255) cccTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTagag > 2:2232641/1‑118 (MQ=255) ccTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCGGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACt > 2:1270323/1‑150 (MQ=255) cTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTg > 2:449168/1‑96 (MQ=255) cTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTg < 1:449168/96‑1 (MQ=255) cTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACtt > 2:1691481/1‑150 (MQ=255) agGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGAtt > 2:2396799/1‑150 (MQ=255) cATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAg < 1:177882/150‑1 (MQ=255) aTGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGc > 2:2162753/1‑150 (MQ=255) cTAAAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCATCCGGCACCTTGGGCCTTCACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCaa < 2:77832/150‑1 (MQ=255) tACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGaa < 2:982583/111‑1 (MQ=255) tACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGaa > 1:982583/1‑111 (MQ=255) tACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAAt > 2:1984012/1‑150 (MQ=255) aaTGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAAttcttc < 1:1691481/150‑1 (MQ=255) tGTTCGATCAAAAGCAGGATAACTGCCGCAAGACAATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTg > 1:1397326/1‑150 (MQ=255) gTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGc < 1:623267/150‑1 (MQ=255) aTCAAACGCAGGATAACTGCCGCAAGGGCATCCCAGTCCCCGGTGCTGCACCCGGCACCTTGAGCCCTAAGCGCCTCTCGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTGCTGGATTGCCGTAGCGGCAACTCTTCTGCTCATc > 2:233387/1‑150 (MQ=255) aTCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATc > 2:2277261/1‑150 (MQ=255) tCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCg > 1:1515477/1‑150 (MQ=255) cAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGa < 2:1533796/150‑1 (MQ=255) aaaaGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGAc < 1:2162753/150‑1 (MQ=255) aaaGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATGGCCGTAGCGGCAATTCTTCTGCTCATCGAcc < 1:923791/150‑1 (MQ=255) aaGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAAttctt < 1:2042493/136‑1 (MQ=255) aaGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAAttctt > 2:2042493/1‑136 (MQ=255) cAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTCACGGTAATTCTTCTGCTCATCGACCtgtg < 1:1270323/150‑1 (MQ=255) aGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTgg > 1:1999605/1‑54 (MQ=255) aGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTgg < 2:1999605/54‑1 (MQ=255) ggATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTggg > 1:2228239/1‑150 (MQ=255) aTAACTGCCGCAAGGTGATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGCTCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGTGcc < 2:741024/150‑1 (MQ=255) tAACTGCAGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCTTTAAGTCTTCTGCTCATGGATCTGTGGGCCa < 2:398324/150‑1 (MQ=255) aCTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATc > 2:180550/1‑150 (MQ=255) aCTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATc > 2:80016/1‑150 (MQ=255) aCTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATc < 2:1678071/150‑1 (MQ=255) aCTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATc < 1:180550/150‑1 (MQ=255) aCTGCCGCAAGGTCATCCTCGTGCCAGGTGCTCCACTCTGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCCTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATc < 2:1397326/150‑1 (MQ=255) cTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCtgtg > 1:113052/1‑142 (MQ=255) cTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCtgtg < 2:113052/142‑1 (MQ=255) tGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGtctc < 2:818735/88‑1 (MQ=255) tGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGtctc > 1:818735/1‑88 (MQ=255) ccGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCa > 2:1959213/1‑150 (MQ=255) gCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGc < 2:2228239/150‑1 (MQ=255) gCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGc < 1:1959213/150‑1 (MQ=255) aaGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCgt > 2:988981/1‑150 (MQ=255) aGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCgtg < 1:1984012/150‑1 (MQ=255) ggTCATCCTCGCGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGCACTGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCCACCTGTGGGCCATCGTCAGCgtgt > 2:817896/1‑150 (MQ=255) gTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGtt > 1:1927971/1‑150 (MQ=255) aTCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGc > 2:240073/1‑96 (MQ=255) aTCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGc < 1:240073/96‑1 (MQ=255) aTCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATc < 1:1219527/121‑1 (MQ=255) aTCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATc > 2:1219527/1‑121 (MQ=255) tCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCgg > 2:1019947/1‑150 (MQ=255) ccaaggTGCCGGGTGCAGCACCTGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTAATCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCgg > 1:23047/6‑150 (MQ=255) cTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAg > 1:837115/1‑150 (MQ=255) tCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCt < 1:2183190/35‑1 (MQ=255) tCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCt > 2:2183190/1‑35 (MQ=255) tCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGc < 1:2277261/150‑1 (MQ=255) tCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGc > 1:140918/1‑150 (MQ=255) gCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACa > 1:993077/1‑150 (MQ=255) aGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGa < 1:1528824/150‑1 (MQ=255) aGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGa > 2:1860520/1‑150 (MQ=255) ggTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTGGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGAc > 2:1081863/1‑150 (MQ=255) gctgcACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGa < 1:2138358/150‑1 (MQ=255) | CCCGAACTGCTGGAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGA > NC_002947/4479714‑4480010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |