Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,480,610 | C→A | 7.5% | A145A (GCC→GCA) | PP_3972 → | short‑chain dehydrogenase/reductase family oxidoreductase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,480,610 | 0 | C | A | 7.5% | 379.0 / 9.6 | 119 | A145A (GCC→GCA) | PP_3972 | short‑chain dehydrogenase/reductase family oxidoreductase |
Reads supporting (aligned to +/- strand): ref base C (54/55); new base A (4/6); total (58/61) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.44e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 124 total aligned reads displayed.
ATCATCGCACCCTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGTTCAAGCGCTGGCCGCCCAGGC > NC_002947/4480461‑4480759 | atcatcGCACCCTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGcc > 1:1049464/1‑150 (MQ=255) atcGCACCCTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGc < 2:1384380/150‑1 (MQ=255) tcGCACCCTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCa > 2:914663/1‑150 (MQ=255) cccTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGgc < 2:1281328/150‑1 (MQ=255) cccTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGgc < 1:1844472/150‑1 (MQ=255) cccTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCAGGCAAAGgc < 1:402267/150‑1 (MQ=255) ccTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGgcg > 2:1645460/1‑150 (MQ=255) ccTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAAGCCGCGCCGCCGCGCACGCCTTTACAGGCCAAGgcg > 2:1061532/1‑150 (MQ=255) cTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGgcgc < 1:2322612/150‑1 (MQ=255) cTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGgc > 1:1043624/1‑148 (MQ=255) cTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGgc < 2:1043624/148‑1 (MQ=255) ttCGAACACCGTAGCAGCGGCACAGAGAAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCa > 2:564554/1‑150 (MQ=255) tccGAACACCGTAGCAGCGGCACAGAGCAGGAAGCGCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCAGGCAAAGgcgtg < 1:1061532/148‑3 (MQ=255) cGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACg > 2:2004793/1‑150 (MQ=255) acCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTgg > 2:706276/1‑150 (MQ=255) acCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTgg > 1:418201/1‑150 (MQ=255) ccGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGt < 2:2228284/150‑1 (MQ=255) agcagcGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCGGCGTTGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTc < 2:2132604/150‑1 (MQ=255) agcGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCa < 2:1520232/150‑1 (MQ=255) cacaGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTg < 2:1579196/136‑1 (MQ=255) cacaGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTg > 1:1579196/1‑136 (MQ=255) acaGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCcgc > 1:490314/1‑150 (MQ=255) agagCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGa < 2:1208099/150‑1 (MQ=255) agCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATg > 1:1926494/1‑150 (MQ=255) cAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATgaa > 2:1542723/1‑150 (MQ=255) cAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATgaa > 1:1241221/1‑150 (MQ=255) aagaagCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATgaag < 1:995300/150‑1 (MQ=255) gaagCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATgaagaa < 2:959267/150‑1 (MQ=255) gaagCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATgaagaa > 2:2303590/1‑150 (MQ=255) aagCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATgaagaa < 2:1471969/149‑1 (MQ=255) aagCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGaagaag > 2:1013914/1‑150 (MQ=255) aagCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGaagaag < 1:914663/150‑1 (MQ=255) agCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGc < 2:920942/150‑1 (MQ=255) tCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAACTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCatt > 2:1750296/1‑150 (MQ=255) ccGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCa > 1:516863/1‑112 (MQ=255) ccGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCattatt < 1:600190/150‑1 (MQ=255) ccGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCAGGCAAAGgcgt < 2:1044119/111‑2 (MQ=255) ccGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCAGGCAAAGgcgt > 1:1044119/1‑110 (MQ=255) cGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGt < 2:563159/119‑1 (MQ=255) cGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTAttt < 1:547236/150‑1 (MQ=255) ggggATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACg < 1:1415307/150‑1 (MQ=255) ggATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGtt > 1:1774707/1‑150 (MQ=255) gATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTc > 1:139905/1‑150 (MQ=255) tCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTg > 1:12245/1‑106 (MQ=255) tCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTg < 2:12245/106‑1 (MQ=255) cccGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGAt < 1:1386912/150‑1 (MQ=255) cccGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGAt < 1:1595262/150‑1 (MQ=255) ccGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACTGTCTGGATg > 1:1572879/1‑150 (MQ=255) ccGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATg > 1:1533421/1‑150 (MQ=255) ccGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCAGGCAAAGgcgtgc > 1:1796724/1‑96 (MQ=255) gTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGaa < 1:2004793/150‑1 (MQ=255) gggggCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCa < 2:436145/150‑1 (MQ=255) ggCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCg > 2:550498/1‑150 (MQ=255) gCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGCCGTTCTGGATGAATGCACCGa < 2:1241221/150‑1 (MQ=255) gCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGa < 2:970559/150‑1 (MQ=255) cGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGAtt < 2:187468/150‑1 (MQ=255) cGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGAtt < 2:1533421/150‑1 (MQ=255) cGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGAtt < 1:1013914/150‑1 (MQ=255) tGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATtgtg < 2:1926494/150‑1 (MQ=255) tGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATtgtg < 1:1589691/150‑1 (MQ=255) tGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATtgtg < 1:1791066/150‑1 (MQ=255) tGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATtgtg < 2:139905/150‑1 (MQ=255) cGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGt > 1:1147484/1‑150 (MQ=255) cAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGa > 2:2159571/1‑150 (MQ=255) aaaGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAAt > 1:838630/1‑130 (MQ=255) aaaGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAAt < 2:838630/130‑1 (MQ=255) aGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGc < 2:1147484/150‑1 (MQ=255) gtgGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATa < 1:706276/150‑1 (MQ=255) tgGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAg > 2:169436/1‑150 (MQ=255) aTCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTc > 2:2121510/1‑150 (MQ=255) tCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTAttt > 2:481789/1‑101 (MQ=255) tCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTAttt < 1:481789/101‑1 (MQ=255) tCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTca > 2:1126426/1‑150 (MQ=255) acaGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGgc > 2:1914222/1‑57 (MQ=255) acaGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGgc < 1:1914222/57‑1 (MQ=255) acaGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTcacc > 2:1491067/1‑150 (MQ=255) acaGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTcacc > 1:1417578/1‑150 (MQ=255) gggCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGCTGCCATAGCGGTCACCACCg > 2:86010/1‑150 (MQ=255) gggCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTc < 2:1080834/143‑1 (MQ=255) aTCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGGTGAATGCACCGATTGTGGTACGGATGCCATCGCGGGCACCACCGACGt > 1:567883/1‑150 (MQ=255) ggcgCGGCCTATGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTAc < 2:1682888/118‑1 (MQ=255) tAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCg < 1:2159571/150‑1 (MQ=255) gccgcgccgcCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCACGATGAAGAAGCATTAATGGACTTTCTGTATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGAcc > 1:294195/1‑150 (MQ=255) cgcgccgcCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAg < 1:564554/150‑1 (MQ=255) cgcgccgcCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCCATCCCCACCGACGTCACCCACAGCGACCAg < 1:1172278/150‑1 (MQ=255) cgcgccgcCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGCATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAg > 1:1599668/1‑150 (MQ=255) gcgccgcCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAgg < 1:2121510/150‑1 (MQ=255) cgccgccgcGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGt < 1:1645460/150‑1 (MQ=255) gccgcGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGAACAGGTTCaa > 1:2194107/1‑150 (MQ=255) ccgcGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGTTCAAg > 1:2096068/1‑150 (MQ=255) aCGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGTTCAAGCGCTgg > 2:1038964/1‑150 (MQ=255) aCGCCTGTGCAGGCAAGGGCGACCGCTTGATCCTCGCAGCCGGCGATGAAGAAGCATTATTTGTCGTTCTGGATGAATGCACCGATTGTGATACTGATGCCATAGCGGTCACCAACGACGTCACCCACAGCGACCAGGTTCAAGCGCTgg < 2:567883/150‑1 (MQ=255) cGCCTTTGCAGGCAAAGGCGTGCGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGTTCAAGCGCTGgc < 2:1812123/150‑1 (MQ=255) gCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGTTCAAGCGCTGgcc > 2:350802/1‑150 (MQ=255) ccTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCAGACATGCAGAATCATTATTGGACGTTCTGGAGTAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGTTCAAGCGCTGgccg > 1:1854972/1‑150 (MQ=255) gCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGTTCAAGCGCTGGCCGCCCAg < 1:598413/150‑1 (MQ=255) ccTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTAGCTGAATGAACGGATGGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGTTCAAGCGCTGGCCGCCCAgg < 1:1495597/150‑1 (MQ=255) cTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGAc > 1:865326/1‑55 (MQ=255) cTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGAc < 2:865326/55‑1 (MQ=255) cTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCACGTTCAAGCGCTGGCCGCCCAGGc < 1:169436/150‑1 (MQ=255) | ATCATCGCACCCTTCGAACACCGTAGCAGCGGCACAGAGCAAGAAGCTCCCCGTAGGGGATATCCCGTCAGGGGGCCGCTGCGTGGCAAAGTTGTGGTAATCACAGGGGCATCCAGCGGCATAGGCCGCGCCGCCGCGCACGCCTTTGCCTGCAAAGGCGCACGCTTGGTGCTCGCAGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGTTCAAGCGCTGGCCGCCCAGGC > NC_002947/4480461‑4480759 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |