| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,561,287 | G→C | 6.2% | I102M (ATC→ATG) | PP_4048 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,561,287 | 0 | G | C | 6.2% | 361.2 / 12.4 | 113 | I102M (ATC→ATG) | PP_4048 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (56/49); new base C (4/3); total (60/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.92e-01 | |||||||||||
Only 100 of 120 total aligned reads displayed.
AAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGCACA > NC_002947/4561140‑4561434 | aaaCGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCgatgat < 2:1061076/150‑1 (MQ=255) aCGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCg < 1:2208195/150‑1 (MQ=255) cGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCgg < 1:1486801/150‑1 (MQ=255) ccACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATCATCGgcgctg < 2:2021482/150‑3 (MQ=255) cACTGTCTGCAGGATGACCTGACTTTCACGTATTAGTTTCAAGCACAACCCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGAt > 1:803672/1‑150 (MQ=255) cAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAgg < 2:2326239/145‑1 (MQ=255) cAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAgg > 1:2326239/1‑145 (MQ=255) ggATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGtcatca < 2:743712/150‑1 (MQ=255) ccTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcaggcagg > 2:2022937/1‑150 (MQ=255) cTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGtca < 2:579985/140‑1 (MQ=255) cTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGtca > 1:579985/1‑140 (MQ=255) cTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCaggcaggc > 1:2213028/1‑150 (MQ=255) tGACTTTCACGCATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGcc > 2:1449059/1‑150 (MQ=255) tttCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccacca > 1:68590/1‑150 (MQ=255) tttCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccacca > 2:1924449/1‑150 (MQ=255) tttCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccacca < 1:1460572/150‑1 (MQ=255) tttCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccacca > 2:1170184/1‑150 (MQ=255) tttCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccacca > 1:1487483/1‑150 (MQ=255) gTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcaggcag > 2:2219887/1‑137 (MQ=255) gTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcaggcag < 1:2219887/137‑1 (MQ=255) tATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAacac < 2:1487483/150‑1 (MQ=255) tCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcaggcag > 1:1217526/1‑134 (MQ=255) tCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcaggcag < 2:1217526/134‑1 (MQ=255) tCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCaggcaggc < 1:187377/136‑1 (MQ=255) aaCAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCAc > 2:1114093/1‑150 (MQ=255) aCAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGtcatc > 1:109211/1‑125 (MQ=255) aCAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGtcatc < 2:109211/125‑1 (MQ=255) aCAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcaggcag < 2:1311134/131‑1 (MQ=255) aCAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcaggcag > 1:1311134/1‑131 (MQ=255) aCAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCAct > 1:1770035/1‑150 (MQ=255) aagcaCAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGc < 2:1770035/150‑1 (MQ=255) aagcaCAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGGTCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGc < 1:418751/150‑1 (MQ=255) acaAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCAtt > 2:809092/1‑150 (MQ=255) caAACCCCGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTc < 1:1114093/150‑1 (MQ=255) aaCCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCTCCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCcg > 2:1826993/1‑150 (MQ=255) aCCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCaggcaggc < 2:1554119/120‑1 (MQ=255) aCCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCaggcaggc > 1:1554119/1‑120 (MQ=255) ccACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCcggc < 2:714206/150‑1 (MQ=255) ccACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCcggc < 1:773757/150‑1 (MQ=255) aaCGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTgcggc > 2:1655933/1‑150 (MQ=255) tgctgctTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGc > 1:1447614/1‑150 (MQ=255) gctTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTgg > 2:712274/1‑150 (MQ=255) ctTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCCCAGTTCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGc > 1:62664/1‑150 (MQ=255) tGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGAGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCg > 1:1012901/1‑150 (MQ=255) cccAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcaggcag > 1:1321959/1‑91 (MQ=255) cccAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcaggcag < 2:1321959/91‑1 (MQ=255) cccAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCaggcaggc < 1:873946/93‑1 (MQ=255) cccAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCaggcaggc > 2:873946/1‑93 (MQ=255) cAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGcc < 2:584851/145‑1 (MQ=255) cAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGcc > 1:584851/1‑145 (MQ=255) cAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGGAGGTAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTccg > 1:2222247/1‑150 (MQ=255) aaCCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAacac < 1:1091586/102‑1 (MQ=255) gTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAac < 2:2103126/95‑1 (MQ=255) gTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAac > 1:2103126/1‑95 (MQ=255) gTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGt > 1:210644/1‑150 (MQ=255) gcCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAgcg > 1:1255702/1‑150 (MQ=255) tGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCtt > 2:2195559/1‑150 (MQ=255) ccATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcagg > 1:614949/1‑71 (MQ=255) ccATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcagg < 2:614949/71‑1 (MQ=255) cATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTg > 2:1859461/1‑96 (MQ=255) aTCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGccc > 1:1647458/1‑150 (MQ=255) tCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCa < 1:973759/88‑1 (MQ=255) aGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGgc < 1:1900488/150‑1 (MQ=255) cccACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGgcgc > 2:1423655/1‑150 (MQ=255) cccACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGgcgc > 1:2393134/1‑150 (MQ=255) cACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGACCAGGCGCAg < 2:1460502/150‑1 (MQ=255) aCGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccac < 1:1063819/68‑1 (MQ=255) aCGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccac > 2:1063819/1‑68 (MQ=255) aCGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAgg < 2:1373127/150‑1 (MQ=255) aCGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAgg > 1:1503775/1‑150 (MQ=255) gAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGcaca > 1:2316956/1‑150 (MQ=255) gCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcag > 1:1385307/1‑51 (MQ=255) gCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcag < 2:1385307/51‑1 (MQ=255) gCCCACCGCCCCCACCACAGCGCCGATGATCGGCGAGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGc < 2:1012901/150‑1 (MQ=255) cccACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTg > 2:2135699/1‑104 (MQ=255) cccACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTg < 1:2135699/104‑1 (MQ=255) ccaaCCGCTCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCa > 2:836613/4‑150 (MQ=255) cACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGc > 1:1205927/1‑150 (MQ=255) cACCGCCCCCACCACAGCGCCGAGTATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGc < 2:557951/150‑1 (MQ=255) aCCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGcc > 2:1055688/1‑150 (MQ=255) cttccccTCCACAGTTCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAg < 2:2316956/147‑1 (MQ=255) ccctgataGCGCCGATCATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCAc > 2:710637/8‑150 (MQ=255) ccaccaCAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCACGCACACCGCAGCCAGGTCAc > 1:1196904/1‑150 (MQ=255) caccacAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGc < 2:937675/90‑1 (MQ=255) accacAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACgg < 1:1423655/150‑1 (MQ=255) cgcgcCGATCATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTc < 1:2314385/95‑1 (MQ=255) cgcgcCGATCATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTc > 2:2314385/2‑96 (MQ=255) gcgcCGATCATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGcc > 2:557874/1‑92 (MQ=255) gcgcCGATCATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGcc < 1:557874/92‑1 (MQ=255) cgcCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCCCTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCa < 1:1658494/114‑1 (MQ=255) cgcCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCa > 2:1658494/1‑114 (MQ=255) gcCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAg < 1:1655933/150‑1 (MQ=255) ccGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGc < 2:1255702/150‑1 (MQ=255) cGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGca < 1:1837283/150‑1 (MQ=255) cGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTACCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGc < 1:1259059/149‑1 (MQ=255) gatgatCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGcac > 1:2180920/1‑150 (MQ=255) atgatCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGcaca > 2:919670/1‑150 (MQ=255) atgatCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGca < 1:772983/148‑1 (MQ=255) atgatCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGca > 2:772983/1‑148 (MQ=255) gatCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCcggc > 2:1262170/1‑61 (MQ=255) | AAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGCACA > NC_002947/4561140‑4561434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |