| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,571,650 | C→T | 8.8% | D490D (GAC→GAT) ‡ | treY → | maltooligosyl trehalose synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,571,650 | 0 | C | T | 8.8% | 321.1 / 15.4 | 114 | D490D (GAC→GAT) ‡ | treY | maltooligosyl trehalose synthase |
| Reads supporting (aligned to +/- strand): ref base C (55/49); new base T (8/2); total (63/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
ACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAACTGACTGCGCCCAGCGCCGCCAA > NC_002947/4571501‑4571799 | gcccGTGACCTGACCCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGAc < 2:2130484/149‑1 (MQ=255)aCCCGTGACCTGACCCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGAc < 1:331051/150‑1 (MQ=255) ccGTGACCTGACCCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCt > 2:1266947/1‑150 (MQ=255) ccGTGACCTGACCCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCt > 2:1704804/1‑150 (MQ=255) tgacctgaccCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGc < 1:1275341/150‑1 (MQ=255) cctgaccCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCTCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGa > 2:914749/1‑150 (MQ=255) ctggccCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATTCCTGCGGGCCCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGTCAAGACCTTGcccac > 2:1706930/1‑147 (MQ=255) ctgaccCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGc > 2:318973/1‑146 (MQ=255) ctgaccCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGc < 1:318973/146‑1 (MQ=255) ctgaccCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGaa > 1:117745/1‑150 (MQ=255) tgaccCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGc < 1:202758/145‑1 (MQ=255) tgaccCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGc > 2:202758/1‑145 (MQ=255) tgaccCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAg > 2:769042/1‑150 (MQ=255) tgaccCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAg < 2:1410946/150‑1 (MQ=255) accCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCt > 2:2160821/1‑150 (MQ=255) ccTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGa > 2:1858058/1‑150 (MQ=255) gcgATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCt < 2:1442677/141‑1 (MQ=255) gcgATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCt > 1:1442677/1‑141 (MQ=255) aTTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTa < 1:1704804/150‑1 (MQ=255) ttCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGc > 1:556121/1‑130 (MQ=255) ttCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGc < 2:556121/130‑1 (MQ=255) tCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACt < 2:172168/150‑1 (MQ=255) ccGAGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGa > 2:32729/1‑150 (MQ=255) gggCCTTGCAGGCGTTGGTGGCGCATTATCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGGTCTTGCCgg < 1:1990413/127‑2 (MQ=255) gggCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGGTCTTGCCgg > 2:1990413/1‑126 (MQ=255) ttGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTg < 2:1226836/141‑1 (MQ=255) ttGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTg > 1:1226836/1‑141 (MQ=255) aGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAAc > 2:1191439/1‑150 (MQ=255) gCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGTCCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACgg < 2:1549748/150‑1 (MQ=255) gTTGGTGGCCCATTACCCAGCTTTCCGAACTGACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCTCTGTCCAACTCCCGGCAAGACCTTACCGAAGCTGCCTGGCCTCTACTGGACCAACTTGAACGTTg < 2:795069/150‑1 (MQ=255) ttGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTgg > 1:556074/1‑150 (MQ=255) gcATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTgggcgg > 1:2264270/1‑150 (MQ=255) gcATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTgggcgg < 2:857953/150‑1 (MQ=255) ttACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCa > 1:1615491/1‑150 (MQ=255) tACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCaa < 2:1615491/150‑1 (MQ=255) aCCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAg < 2:556074/150‑1 (MQ=255) ccGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGAc > 1:2140704/1‑105 (MQ=255) ccGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCaa > 2:1979487/1‑123 (MQ=255) ggTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACCGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTg > 1:1386842/1‑150 (MQ=255) tttACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTGCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTggc < 1:530718/150‑1 (MQ=255) aCCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTg < 1:795351/131‑1 (MQ=255) aCCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTAGCCGCTACTgg > 1:236645/1‑111 (MQ=255) ccGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCa > 1:359406/1‑150 (MQ=255) cGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCAt < 2:359406/150‑1 (MQ=255) aCTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCAc > 2:1236423/1‑150 (MQ=255) ttCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCg > 1:851495/1‑150 (MQ=255) ttCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCg > 1:91059/1‑150 (MQ=255) cAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCggg < 2:851495/150‑1 (MQ=255) aaTGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCgggg > 1:2069138/1‑150 (MQ=255) aaTGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCAGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGCGCAAGCCTGGCGGCATCTGACACCgggg > 2:1018964/1‑150 (MQ=255) aTGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGTCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGgc > 1:583017/1‑150 (MQ=255) tGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGcc > 1:552791/1‑150 (MQ=255) gcgcCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCgcaa < 1:1191439/150‑1 (MQ=255) ccGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTg > 1:1468073/1‑58 (MQ=255) ccGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTg < 2:1468073/58‑1 (MQ=255) ccGGCGCAGACCGAAACGTTCTTCCAGCAAGCCCTCACCAATGCCTGGCACAACCTTGCAGAAGCTGACTGGCCGCTACTGGACTAACTTGAACGGTGCCTGGGCGGGCAAGCCTGGCGGCATCTACCACCGGGGCGCGCCCgcaagcaa > 2:780818/1‑150 (MQ=255) cGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAAc < 1:413075/150‑1 (MQ=255) ggCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCg > 2:2259136/1‑73 (MQ=255) ggCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCg < 1:2259136/73‑1 (MQ=255) ggCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACt < 1:1858058/150‑1 (MQ=255) gACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCAc > 2:1021863/1‑150 (MQ=255) gAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGcc > 1:2375978/1‑150 (MQ=255) aaaCGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCt > 1:549000/1‑150 (MQ=255) aaaCGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCt < 1:2160821/150‑1 (MQ=255) aaaCGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCt < 1:2204580/150‑1 (MQ=255) aaaCGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCt < 2:117745/150‑1 (MQ=255) gTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCtgcgt > 1:439144/1‑150 (MQ=255) ttcCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTg > 1:2356060/1‑60 (MQ=255) ttcCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTg < 2:2356060/60‑1 (MQ=255) ttcCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTgcgc > 1:1905727/1‑150 (MQ=255) ttcCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTgcgc < 2:2149253/150‑1 (MQ=255) aaccAGCCGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCCCGCCtccgtgaac > 2:2067888/3‑147 (MQ=255) cagGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTgggcgggc < 2:943118/82‑1 (MQ=255) cagGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTgggcgggc > 1:943118/1‑82 (MQ=255) ggCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCa > 1:1154675/1‑147 (MQ=255) ggCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCa < 2:1154675/147‑1 (MQ=255) gCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCaa < 1:2053264/150‑1 (MQ=255) cccTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGc < 2:2195897/130‑1 (MQ=255) gACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAactgac < 2:1905727/150‑1 (MQ=255) aCCAATGCCCGGCAAGACCTTGCCGAATCTTACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAactgact < 2:561975/150‑1 (MQ=255) aCCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGc > 1:837629/1‑91 (MQ=255) aCCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGc < 2:837629/91‑1 (MQ=255) aCCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAactgact < 1:1236423/150‑1 (MQ=255) tcagcttcGGCAAGGTCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAACTGACTgc > 2:2167667/8‑150 (MQ=255) cAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTgcgc > 2:1864646/1‑133 (MQ=255) cAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTgcgc < 1:1864646/133‑1 (MQ=255) cttcGGCAAGGTCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAACTGACTGCGccc > 2:1066613/4‑150 (MQ=255) ttcGGCAAGGTCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGgcgcgc < 2:432597/95‑1 (MQ=255) ttcGGCAAGGTCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGgcgcgc > 1:432597/3‑97 (MQ=255) ttcGGCAAGGTCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAACTGACTGCGCCCa > 1:637924/3‑150 (MQ=255) ttcGGCAAGGTCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAACTGACTGCGCCCa > 1:1885590/3‑150 (MQ=255) ttcGGCAAGGTCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAACTGACTGCGCCCa > 2:1535404/3‑150 (MQ=255) tcGGCAAGGTCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAGGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAACTGACTGCGCCCAg > 1:1969799/2‑150 (MQ=255) ccGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTgg > 2:1979027/1‑59 (MQ=255) ccGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAACTGACTgcgc < 2:1091208/146‑1 (MQ=255) ccGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAACTGACTgcgc > 1:1091208/1‑146 (MQ=255) ccGGCAAGACCTTGCCGAAGATGACTGGCCGCTACTGGACCAACTTGAAc < 1:994686/50‑1 (MQ=255) ccGGAAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTgg < 1:1979027/59‑1 (MQ=255) aGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAACTGACTGCGCCCAGcgccgc < 2:2375978/150‑1 (MQ=255) ccTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAACTGACTGCGCCCAGCGCCGCCaa > 2:257769/1‑150 (MQ=255) | ACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGCCTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGCAACTGACTGCGCCCAGCGCCGCCAA > NC_002947/4571501‑4571799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |