| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,602,700 | G→A | 5.6% | A163A (GCG→GCA) | PP_4074 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,602,700 | 0 | G | A | 5.6% | 323.0 / 6.7 | 108 | A163A (GCG→GCA) | PP_4074 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (48/52); new base A (2/4); total (51/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.93e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
AACAAGCTGCTGCAGTTGCGTGAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAGTTGGTTCCCACACAAGAGGGTTA > NC_002947/4602551‑4602848 | aaCAAGCTGCTGCAGTTGCGTGAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAgcg > 1:870822/1‑150 (MQ=255) aCAAGCTGCTGCAGTTGCGTGAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAgcgc < 2:1390910/150‑1 (MQ=255) cAAGCTGCTGCAGTTGCGTGAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGcc > 1:2073008/1‑150 (MQ=255) gctgctGCAGTTGCGTGAAGCGCTGGTTGCCCTGAAAGGCACGCTCGGGAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCaaa > 1:1026287/1‑150 (MQ=255) gctgctGCAGTTGCGTGAAGCGCTGGTTGACCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGCGCTTCAAGCACCagg < 2:927954/150‑3 (MQ=38) ctgctgCAGTTGCGTGAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAATAACTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCaaaa < 1:1250679/150‑1 (MQ=255) gctgcAGTTGCGTGAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGc > 1:579586/1‑150 (MQ=255) cAGTTGCGTGAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGAc < 1:1538494/150‑1 (MQ=255) gCGTGAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGCGCTTCAAGCACCaggt < 2:1462765/139‑4 (MQ=38) gCGTGAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGCGCTTCAAGCACCaggt > 1:1462765/1‑136 (MQ=38) gTGAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCAGCAAACAGCGGCAGAAGCTTCTGAGCGAGGCGCATGCCCGCAAGCAACTAGCGCAAGAACTCGACCTGGTGATTGAAGCGCCAAAAGCAGACTGAGACa > 1:11723/1‑150 (MQ=37) gAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACAACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAAc > 2:2268731/1‑150 (MQ=255) gcgcTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCa < 2:408957/135‑1 (MQ=255) gcgcTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGa < 1:975088/150‑1 (MQ=255) gcgcTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGa < 1:2075450/150‑1 (MQ=255) ccTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGCGCTTCAAGCACCaggt < 2:401734/121‑4 (MQ=38) ccTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGCGCTTCAAGCACCaggt > 1:401734/1‑118 (MQ=38) ccTGAAACGACCACTGGGATCCGTGCTTACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATACCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCTCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATg > 2:150307/1‑150 (MQ=37) cTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGc < 2:579586/150‑1 (MQ=255) cTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGc < 2:1083120/150‑1 (MQ=255) tGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGcc > 2:2114159/1‑150 (MQ=255) gAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGa < 1:479713/136‑1 (MQ=255) gAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGa > 2:479713/1‑136 (MQ=255) aaGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCaaa < 1:2407918/150‑1 (MQ=255) aGGCCCGCTGCGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAg < 2:1266866/150‑1 (MQ=255) ccGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGCAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCaa < 2:340127/150‑1 (MQ=255) cGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAg > 1:1534547/1‑150 (MQ=255) ggCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACaa < 1:445214/150‑1 (MQ=255) cACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCTCCAAAAGCa < 2:92828/97‑1 (MQ=255) cACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCa > 1:92828/1‑97 (MQ=255) cACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAAATCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGtt > 1:1067171/1‑150 (MQ=255) tCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTATTGaa > 2:2157812/1‑148 (MQ=255) tCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTATTGaa < 1:2157812/148‑1 (MQ=255) cGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAacac > 1:1535800/1‑150 (MQ=255) aaCAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGc < 2:317616/150‑1 (MQ=255) aGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCAt > 2:361450/1‑108 (MQ=255) aGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCAt < 1:361450/108‑1 (MQ=255) cagcagCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAacac > 2:621652/1‑150 (MQ=255) agcagcTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAg < 2:1227075/93‑1 (MQ=255) agcagcTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAg > 1:1227075/1‑93 (MQ=255) gcagcTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCaaa < 2:2204469/107‑1 (MQ=255) gcagcTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCaaa > 1:2204469/1‑107 (MQ=255) gcagcTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTg > 2:2328492/1‑150 (MQ=255) gcagcTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTg > 2:2328430/1‑150 (MQ=255) cagcTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGa < 1:971300/150‑1 (MQ=255) cagcTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGa > 1:875796/1‑150 (MQ=255) ttCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCaa < 2:1534547/150‑1 (MQ=255) tCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAAt < 1:1318244/150‑1 (MQ=255) gAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAaca > 2:1815680/1‑126 (MQ=255) gAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAaca < 1:1815680/126‑1 (MQ=255) aaCGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCa < 1:607505/150‑1 (MQ=255) gacgCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCg < 1:564983/129‑1 (MQ=255) gacgCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCg < 1:564932/129‑1 (MQ=255) gacgCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCg > 2:564932/1‑129 (MQ=255) gcgcATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGaaa > 2:321241/1‑129 (MQ=255) gcgcATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGaaa > 1:334679/1‑129 (MQ=255) gcgcATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGaaa < 1:321241/129‑1 (MQ=255) gcgcATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGc > 2:2063947/1‑150 (MQ=255) gcgcATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGc > 2:1990435/1‑150 (MQ=255) tGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGAc < 1:1424944/150‑1 (MQ=255) cccGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCa < 2:875796/150‑1 (MQ=255) ccGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGtt > 2:1707359/1‑105 (MQ=255) ccGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGaaa > 2:180418/1‑109 (MQ=255) ccGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGaaa < 1:180418/109‑1 (MQ=255) ccGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAg > 2:222907/1‑150 (MQ=255) ccGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAg > 2:87400/1‑150 (MQ=255) caagcaaCTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGaaa > 1:10531/1‑106 (MQ=255) caagcaaCTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGaaa < 2:10531/106‑1 (MQ=255) aagcaaCTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCa > 1:1576618/1‑150 (MQ=255) gcaaCTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTc > 1:1321595/1‑138 (MQ=255) gcaaCTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTc < 2:1321595/138‑1 (MQ=255) caaCTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATgg < 1:428408/150‑1 (MQ=255) tCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCaga < 2:1887/150‑1 (MQ=255) cgcAAGAAATCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGAc < 2:1067171/150‑1 (MQ=255) aaGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACATGGCGAAACACTGAGCAATGCCACCTTGCTCCACCAGATCATGGCAGAGACCaa < 2:11723/150‑1 (MQ=255) aaGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGaaa > 1:449292/1‑104 (MQ=255) aaGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGaaa < 2:449292/104‑1 (MQ=255) aaGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCaa > 1:701662/1‑150 (MQ=255) aGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAg < 1:2328492/150‑1 (MQ=255) aGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAg < 1:2328430/150‑1 (MQ=255) aaCTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTGGCTCGACCAGATCATGGCAGTGCCCAAgat > 2:509372/1‑148 (MQ=255) tCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAacac > 2:1087061/1‑101 (MQ=255) tCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAacac < 1:1087061/101‑1 (MQ=255) tCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGa > 1:1666163/1‑123 (MQ=255) tCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGa < 2:1666163/123‑1 (MQ=255) tCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAGTTGGt > 2:1626319/1‑150 (MQ=255) aCCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCaa < 1:673895/62‑1 (MQ=255) aCCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCaa > 2:673895/1‑62 (MQ=255) aCCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAAt > 1:2270437/1‑106 (MQ=255) aCCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAAt < 2:2270437/106‑1 (MQ=255) cTGGTGCTTGAAGCGCCAACAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAGTTGGTTCCca < 2:1588551/150‑1 (MQ=255) cTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGCGACCAAGTTGGTTCCca < 1:2268731/150‑1 (MQ=255) tGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAGTTGGTTCCCACACAagag < 1:2114159/150‑1 (MQ=255) tGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAGTTGGTTCCCACACAagag < 1:1626319/150‑1 (MQ=255) gAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAGTTGGTTcc < 1:93134/139‑1 (MQ=255) gAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAGTTGGTTcc > 2:93134/1‑139 (MQ=255) gAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAGTTGGTTCCCACACAAGAgg > 2:2073112/1‑150 (MQ=255) aaGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAGTTGGTTCCCACACAAGAggg < 1:1719576/150‑1 (MQ=255) gcgcCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAGTTGGTTCCCACACAAGAGGGtt < 2:2073008/150‑1 (MQ=255) cgcCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAGTTGGTTCCCACACAAGAGGGTTa < 2:1535800/150‑1 (MQ=255) | AACAAGCTGCTGCAGTTGCGTGAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGCCCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGACTGAGACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGCAGAGACCAAGTTGGTTCCCACACAAGAGGGTTA > NC_002947/4602551‑4602848 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |