| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,654,937 | T→C | 5.2% | intergenic (+43/‑215) | aceA → / → PP_4118 | isocitrate lyase/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,654,937 | 0 | T | C | 5.2% | 284.5 / 2.8 | 94 | intergenic (+43/‑215) | aceA/PP_4118 | isocitrate lyase/membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (41/48); new base C (3/2); total (44/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.86e-01 | |||||||||||
AGGAAGTGGGCACTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGC > NC_002947/4654788‑4655084 | agGAAGTGGGCACTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGTCGTGTGA‑AAGCt > 1:1018645/1‑150 (MQ=255) ggAAGTGGGCACTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTc < 2:1681050/150‑1 (MQ=255) gAAGTGGGCACTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTcc < 1:460458/150‑1 (MQ=255) aGTGGGCACTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCgg < 2:1218282/150‑1 (MQ=255) aGTGGGCACTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCgg < 2:1358894/150‑1 (MQ=255) cTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGCCGGTGACTTCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGTTCGCGTTGGCCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGt < 1:1870094/150‑1 (MQ=255) tGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGtt < 1:213903/150‑1 (MQ=255) tGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGtt < 1:945716/150‑1 (MQ=255) ggCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGttt > 1:1069111/1‑150 (MQ=255) ggCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGttt < 2:1888060/150‑1 (MQ=255) ggCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGttt < 2:554869/150‑1 (MQ=255) cTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GAGCTT‑TCACAAGCCCCGGGCCTTTGttcaa < 1:364543/150‑4 (MQ=38) tACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGCCCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTa < 1:616340/150‑1 (MQ=255) ttCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTGGACCGCGGAAGAGCAGGT‑CCACTGACAGTGGGTTGCCGTTGAACAATGTCCTG‑‑GGCCTTGTGA‑AAGCCCCGCGCCCTGGCCTTTAccc > 2:855241/1‑150 (MQ=255) gacgacATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCgag > 1:308453/1‑150 (MQ=255) gacgacATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCgag > 1:503456/1‑150 (MQ=255) gacgacATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCgag > 2:1928275/1‑150 (MQ=255) gacATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGaaa < 1:1907860/150‑1 (MQ=255) gacATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGaaa > 1:704428/1‑150 (MQ=255) gacATGACCACCGTGATCCAGGGCGGCGCTGCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTG‑CCACTGATAGTGAG‑‑CCAGTGGGGGTAGGGTGCGGTGGGCTTGTGA‑AAGCTACGGGCCTTTGCGTTTACCGGAGaaa > 1:2089585/1‑150 (MQ=255) cATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTa < 1:1594017/139‑1 (MQ=255) cATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTa > 2:1594017/1‑139 (MQ=255) aTGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAggg > 1:1971252/1‑150 (MQ=255) tGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgggc < 2:255461/150‑1 (MQ=255) accaccGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GAGCTT‑TCACAAGCCCCGGGCCTTTg < 1:1534362/129‑1 (MQ=37) accaccGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GAGCTT‑TCACAAGCCCCGGGCCTTTg > 2:1534362/1‑129 (MQ=37) caccGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgggccggg > 2:2016736/1‑150 (MQ=255) accGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgggccgggc < 2:1854215/150‑1 (MQ=255) cGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCct > 2:1096411/1‑150 (MQ=255) tGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCctgc > 2:1964956/1‑150 (MQ=255) gctCCCGGGCGGCGCTTACGCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCctgct < 2:1018645/148‑1 (MQ=255) aTCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCctgctg < 1:96873/150‑1 (MQ=255) aGGGCGACGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCAGGCCTTGGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCa > 1:754384/1‑150 (MQ=255) gcggcgCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAAtt < 1:1928275/150‑1 (MQ=255) gcggcgCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGA‑CAGTTGGCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAAtt < 1:1353009/150‑1 (MQ=255) ggcgCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAAtttt > 1:1813081/1‑150 (MQ=255) cgcTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTa > 1:1778099/1‑150 (MQ=255) gcTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTAc > 1:2213998/1‑150 (MQ=255) tcgGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTAc > 1:1957131/1‑109 (MQ=255) tcgGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTAc < 2:1957131/109‑1 (MQ=255) gTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTc > 2:767532/1‑150 (MQ=255) gTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTGGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTc > 2:1399598/1‑150 (MQ=255) cTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGtt > 1:1125576/1‑97 (MQ=255) cTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGtt < 2:1125576/97‑1 (MQ=255) tGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGTTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTTCTTTCCAATTTTTACCAGCCGTTCACCGt < 1:63653/150‑1 (MQ=255) tGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGt > 2:2163996/1‑150 (MQ=255) tGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGt < 1:872033/150‑1 (MQ=255) cACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGt > 2:1816401/1‑93 (MQ=255) cACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGt < 1:1816401/93‑1 (MQ=255) cACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGcc > 2:1654680/1‑139 (MQ=255) cACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGcc < 1:1654680/139‑1 (MQ=255) cACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACAAGCCGTTCACCGttt > 1:647880/1‑150 (MQ=255) aCCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTccgcc < 2:994683/150‑1 (MQ=255) ggTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCt > 2:333529/1‑150 (MQ=255) ttCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTAc > 2:335567/1‑150 (MQ=255) agaagaGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTcc > 2:2095992/1‑64 (MQ=255) agaagaGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTcc < 1:2095992/64‑1 (MQ=255) agaagaGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTcgc < 1:147194/150‑1 (MQ=255) gaagaGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTcgcg < 2:1488640/150‑1 (MQ=255) aagaGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCgg < 2:1069111/150‑1 (MQ=255) aGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAAc < 2:970282/150‑1 (MQ=255) gTT‑CCACTGATAGTGGGGTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTGCCCGAGAACGCGCCGGGCCTGCTGGACAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAAcc < 1:1748074/150‑1 (MQ=37) cACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCt > 2:509924/1‑57 (MQ=255) cACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCt < 1:509924/57‑1 (MQ=255) cACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCa > 1:2283502/1‑150 (MQ=255) aCTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCAc > 1:861924/1‑150 (MQ=255) tAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTaca > 2:1511076/1‑150 (MQ=255) ggTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGAt < 1:767532/150‑1 (MQ=255) cGTTTAGCAAAAGCCCG‑‑GGGCTTGGTA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAGGGGCCGGGCCTGCTGGCCAATTCTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggag < 1:1100736/150‑1 (MQ=25) cGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggag < 2:27430/150‑1 (MQ=255) cGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggag < 1:2016736/150‑1 (MQ=255) ttGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTCCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGCGTAAACCCGCACCTACACTGCTCGggggga > 2:919144/1‑150 (MQ=255) gAAAAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGgaga < 2:754384/150‑1 (MQ=255) aaCAAAGGCCCG‑‑GAGCTT‑TCACAAGCCCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGac > 1:1806316/1‑150 (MQ=25) aCAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCCATCTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGaca < 1:1964956/150‑1 (MQ=255) cAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTAt > 2:1432306/1‑109 (MQ=255) cAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTAt < 1:1432306/109‑1 (MQ=255) aaGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGTGAAAGGGCCGGGCCTGGTGTACATTTTTTACCAGCCGTTCACGGTTTCCGCCGCTACCTTATTCGCGGGTAGACCCGCACCCACACTGATCGTAAGTAGacacac > 2:176869/1‑150 (MQ=255) aGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGAcacaca < 2:2089585/150‑1 (MQ=255) ccG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCgg > 1:1349716/1‑150 (MQ=255) cG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGc < 1:1399598/150‑1 (MQ=255) g‑‑gggCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCctgct > 1:1147557/1‑56 (MQ=255) g‑‑gggCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCctgct < 2:1147557/56‑1 (MQ=255) g‑‑gggCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCg > 1:2019579/1‑150 (MQ=255) gggCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGa < 2:2213998/150‑1 (MQ=255) ggCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGAt > 1:2238316/1‑150 (MQ=255) gCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCATCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGAtt < 1:639994/150‑1 (MQ=255) gCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGAtt < 2:1813081/150‑1 (MQ=255) ttGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTgg < 2:861924/150‑1 (MQ=255) ttGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTgg > 1:22300/1‑150 (MQ=255) gtgA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGgc < 1:2163996/150‑1 (MQ=255) gA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGgcgc > 1:491053/1‑150 (MQ=255) a‑aaGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCa > 1:735833/1‑150 (MQ=255) aaGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGTCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAg < 1:1096411/150‑1 (MQ=255) gCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGc > 2:171668/1‑150 (MQ=255) | AGGAAGTGGGCACTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTT‑CCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCG‑‑GGGCTTGTGA‑AAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGC > NC_002947/4654788‑4655084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |