| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,657,527 | C→G | 8.0% | T39T (ACC→ACG) | nuoC → | NADH‑quinone oxidoreductase subunit C/D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,657,527 | 0 | C | G | 8.0% | 316.8 / 13.2 | 103 | T39T (ACC→ACG) | nuoC | NADH‑quinone oxidoreductase subunit C/D |
| Reads supporting (aligned to +/- strand): ref base C (52/41); new base G (4/4); total (57/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
TTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGCCTGCCAGCCGCC > NC_002947/4657383‑4657674 | ttAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCAt < 2:1422176/150‑1 (MQ=255)ttAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCAt < 2:2324130/150‑1 (MQ=255) aCGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGcc > 1:702261/1‑150 (MQ=255) cGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACG‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGccc < 1:1644763/150‑1 (MQ=255) cGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGccc < 1:1284891/150‑1 (MQ=255) gACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGc < 2:702261/150‑1 (MQ=255) cGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAAcg > 1:1235206/1‑150 (MQ=255) agaCCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAAcgcg < 2:1513159/150‑1 (MQ=255) gaCCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACgcgc < 1:1226739/150‑1 (MQ=255) gaCCATGACACCAGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACgcgc < 2:624431/150‑1 (MQ=255) aCCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGcc > 1:571640/1‑150 (MQ=255) ccATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGccc > 2:929426/1‑150 (MQ=255) gACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGccc < 1:781267/117‑1 (MQ=255) gACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGccc > 2:781267/1‑117 (MQ=255) gACAACGCTATTTTCATTCCGCCCTACAAGACATACTACCATTATGTGGTCGTCGCCATGACTAGACTGTTTT‑TTTCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAagag < 1:1853512/150‑1 (MQ=255) cccGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTg > 1:1069770/3‑150 (MQ=255) aaCGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTg > 1:798686/1‑150 (MQ=255) aaCGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCACGTGCAGTGCGTACAATTCGGCGAACTAAAAGGGGTg > 2:1122474/1‑150 (MQ=255) aCGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGc < 1:929426/150‑1 (MQ=255) gCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTc > 1:937091/1‑150 (MQ=255) cTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCa < 1:1775256/150‑1 (MQ=255) tttCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCtt > 1:1422603/1‑150 (MQ=255) ttCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACGGGCATGCCGGTGc > 2:1065985/1‑109 (MQ=255) ttCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACGGGCATGCCGGTGc < 1:1065985/109‑1 (MQ=255) ttCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTc > 1:327466/1‑150 (MQ=255) ttCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTgc > 1:1449349/1‑150 (MQ=255) ttCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCAGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTgc < 1:2375376/150‑1 (MQ=255) tggcGCCCTACAAGTCTGACGCCTAGGATGTGGTCGTCGAACTGAACA‑CCCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTgc < 2:1612508/147‑1 (MQ=255) gCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCgcgg > 2:1107146/1‑150 (MQ=255) aaGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGcc > 2:1586559/1‑150 (MQ=255) aaGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGcc > 1:2381443/1‑150 (MQ=255) ggCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCaa < 1:1122474/150‑1 (MQ=255) gCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAg < 2:327466/150‑1 (MQ=255) cgacCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTa < 2:937091/150‑1 (MQ=255) gacCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTAc > 1:2354568/1‑150 (MQ=255) ccAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAg > 2:1089542/1‑150 (MQ=255) cAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCaaa < 2:1125320/108‑1 (MQ=255) cAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCaaa > 1:1125320/1‑108 (MQ=255) aGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCa > 1:1092230/1‑150 (MQ=255) gATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATg < 2:1422603/150‑1 (MQ=255) gtgGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCTTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCACACCTTTAAGAGTCGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTg > 2:1872502/1‑150 (MQ=255) tgGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGt > 1:190424/1‑150 (MQ=255) ggTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTa < 1:1089542/150‑1 (MQ=255) cgtcgAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGccc > 1:2038870/1‑89 (MQ=255) cgtcgAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGccc < 2:2038870/89‑1 (MQ=255) tcgAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGAcc > 2:1590373/1‑150 (MQ=255) aaCTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGc > 2:294932/1‑150 (MQ=255) aaCTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGc > 1:1629342/1‑150 (MQ=255) aCTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGTGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCa > 1:1832959/1‑150 (MQ=255) cTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACGGGCATGCCGGTGcgg < 2:2016171/66‑3 (MQ=38) cTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACGGGCATGCCGGTGcgg > 1:2016171/1‑64 (MQ=38) cTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCAt < 2:2062067/150‑1 (MQ=255) cTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCAt < 2:2354568/150‑1 (MQ=255) tGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATg > 1:1407573/1‑150 (MQ=255) aaca‑acCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTgg > 1:741355/1‑66 (MQ=255) aaca‑acCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTgg < 2:741355/66‑1 (MQ=255) aaca‑acCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAag > 2:1829564/1‑88 (MQ=255) aaca‑acCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAag < 1:1829564/88‑1 (MQ=255) aaca‑acCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCaacgc > 2:1017483/1‑146 (MQ=255) a‑acCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTc < 1:1586559/150‑1 (MQ=255) acCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGCCCTGc > 1:984177/1‑141 (MQ=255) ccGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGc < 1:1402504/116‑1 (MQ=255) ccGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGc > 2:1402504/1‑116 (MQ=255) cGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTcgac < 2:2364837/150‑1 (MQ=255) ttttGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTcgacga < 1:1107146/150‑1 (MQ=255) ggCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGc < 2:1412442/117‑1 (MQ=255) ggCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGc > 1:1412442/1‑117 (MQ=255) cgcCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCt > 2:896881/1‑150 (MQ=255) gATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCa > 2:746931/1‑79 (MQ=255) gATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCa < 1:746931/79‑1 (MQ=255) aTGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCa < 1:896881/150‑1 (MQ=255) tGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGc > 2:809262/1‑130 (MQ=255) tGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGc < 1:809262/130‑1 (MQ=255) aTTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCa > 1:1187429/1‑150 (MQ=255) ccAGGAAACCCGCACCGGCATGCCCGTCCGGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTgg > 1:1272244/1‑150 (MQ=255) cAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACa < 2:607972/94‑1 (MQ=255) cAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACa > 1:607972/1‑94 (MQ=255) cAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGc > 1:313269/1‑150 (MQ=255) cAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGc > 2:596413/1‑150 (MQ=255) cAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGAAATAATTGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGc > 1:1232324/1‑150 (MQ=255) aGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGcc > 1:136689/1‑150 (MQ=255) aaaCCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGCCTGc < 2:1092230/150‑1 (MQ=255) aCCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCCTGCTGTACGAACTGCATGGCGTCGACGAGCGCCTGCGCACTCAGCGCCGTGGCCTGCCa < 2:1235206/150‑1 (MQ=255) aCCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGCCTGCCa > 2:57389/1‑150 (MQ=255) acagCACGGGCATGCCGGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGc < 1:2147630/140‑1 (MQ=255) acagCACGGGCATGCCGGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGc > 2:2147630/4‑143 (MQ=255) ccGCACTGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATg > 1:810290/1‑107 (MQ=255) ccGCACTGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATg < 2:810290/107‑1 (MQ=255) ccGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCGTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGCCTGCCAgc > 2:718843/1‑150 (MQ=255) cGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTg > 2:370162/1‑139 (MQ=255) cGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTg < 1:370162/139‑1 (MQ=255) agCACGGGCATGCCGGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAgc > 2:398513/2‑133 (MQ=255) agCACGGGCATGCCGGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAgc < 1:398513/132‑1 (MQ=255) gCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTa < 2:1367265/82‑1 (MQ=255) gCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTa > 1:1367265/1‑82 (MQ=255) gCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCAt < 2:2088090/104‑1 (MQ=255) gCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCAt > 1:2088090/1‑104 (MQ=255) gCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGCCTGCCAgccg > 1:793719/1‑150 (MQ=255) cACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGCCTGCCAgccgc < 2:1629342/150‑1 (MQ=255) aCCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGCCTGCCAgccgcc > 1:1546115/1‑150 (MQ=255) | TTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACA‑ACCGTTTTGGCGCCGATGCATTCGTCGCCCAGGAAACCCGCACCGGCATGCCCGTGCTGTGGGTAAAACGCGCCCAGCTCAAAGAGGTGCTCAGCTTCCTGCGCGGCGTCGCCAAGCCTTACAGCATGCTGTACGACCTGCATGGCGTCGACGAGCGCCTGCGCACCCAGCGCCGTGGCCTGCCAGCCGCC > NC_002947/4657383‑4657674 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |